Array 1 59177-62189 **** Predicted by CRISPRDetect 2.4 *** >NZ_AELS01000027.1 Methanobrevibacter smithii TS147B Contig10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 59177 37 100.0 36 ..................................... ACCGTTAAAATACTTGTATGGTATCTTCCTTTTACT 59250 37 100.0 36 ..................................... ATGGGTGATGGTGTGGGATGGTTTTTTTTATATTGG 59323 37 100.0 37 ..................................... ATTTTTTGGATTGTTGAACCCACGACCGTCTATATAA 59397 37 100.0 35 ..................................... GATTACTGAATGGTTGGTTCATGATTTCTCTTAAT 59469 37 100.0 35 ..................................... TCTACCAACCAACCCCCACAGTGGGGGATAATGAC 59541 37 100.0 35 ..................................... TCTTTCGGCTCTTGTTAGGCGTGTATAGGATTTAT 59613 37 100.0 33 ..................................... TCTAAAATAAGTATCGGTGTTTTCCCTTATACC 59683 37 100.0 38 ..................................... ATTAATAGATAATTCATTAAACTGTATTTCACTTGCAA 59758 37 100.0 35 ..................................... CATAATATCACGTGTTTTCTCATAAGTACTGTCAT 59830 37 100.0 36 ..................................... CCTCATCTTACAGTCCACATCGAAATTGATGAAATC 59903 37 100.0 35 ..................................... TACTCATAATATCACCTATCAAATATTTGATATGG 59975 37 100.0 36 ..................................... TTTTGCTATTTTAAAGCCCATTCTAACTGCATTTTC 60048 37 100.0 34 ..................................... AATCGATATACATTGTTTCAGTTTTGCTCTGTGA 60119 37 100.0 36 ..................................... TTTGTTCACTAACCATGATAAATCTCCTTTTTTATG 60192 37 100.0 37 ..................................... TTTCTATGTATTCATCTTTCATGTACTGGATTAGTGA 60266 37 100.0 37 ..................................... ACCGATAGAATAAGGCAATACTTTAGTTTTAACCACT 60340 37 100.0 36 ..................................... CCTCATCTTACAGTCCACATCGAAATTGATGAAATC 60413 37 100.0 32 ..................................... GTTTCCTTTTTATACTCTTCACTATCTAAAAG 60482 37 100.0 33 ..................................... TAATAAATACATATTTTAAAAATACTGTTATCT 60552 37 100.0 36 ..................................... TATAATTTCTCCATTTGCGAAATCTTGATGTGCGAT 60625 37 100.0 35 ..................................... GTTTTTCCGTTAAAATAACGGTATGGAATATTTCT 60697 37 100.0 36 ..................................... ACTTCCCAGAACAGCCTTTTGTCGTATTTTATTTTA 60770 37 100.0 36 ..................................... TACTCTGCATCTCTTTGCAGTCTTTTGATTTCTTTG 60843 37 100.0 34 ..................................... TCCATTTACATTAACTATGTTATCATCATCAGAC 60914 37 100.0 35 ..................................... TGCTTTTAGGATCCCTAATCATAATATAACTCCAT 60986 37 100.0 35 ..................................... CCCCACAGGAGTACTGAATGGTTGGTTCATGATTT 61058 37 100.0 39 ..................................... AGTCCATCCATCTGAATCGGTAGTTTTATCATATGTTTT 61134 37 100.0 35 ..................................... TTGATAAGCTCCTGACTGGAAAGGTGGGAGTATGT 61206 37 100.0 37 ..................................... ACTTCCCAGAACAGCCTTTTGTCGTATTTTATTTTAT 61280 37 100.0 36 ..................................... TGATGTAATAGAAACTGGTTAATATGTTAAATGAGG 61353 37 100.0 36 ..................................... AATATCTTTTTGATAGAGGATATATGTGTGGTCTGC 61426 37 100.0 34 ..................................... ATGATTTTCATTTTATCACTTTTGTACTTGTTAT 61497 37 100.0 36 ..................................... TATATTAAAATAAAACCACCAAGTATTTTAGAATCT 61570 37 100.0 37 ..................................... GCATCTTTATATTTAATTTGAGATTCACCTTTAACTA 61644 37 100.0 35 ..................................... AATTCTTCTTCTGAGATGGTTCTCTTATGCATGTC 61716 37 100.0 35 ..................................... ATTGTATGGATGTCTAAAATAATAGGGTTTAACCT 61788 37 100.0 35 ..................................... TTTTTTTCATAAAATTTTAAAGCTGCTGGATCTAT 61860 37 97.3 35 ...........T......................... ATAATAGGATTGGCCTTTACCTTCCTATAGGTTAG 61932 37 100.0 34 ..................................... GACTCAAATTCTTTATTCACCATAAAAGACCTCC 62003 37 97.3 38 ..........T.......................... TTATAGTATGTTGCATCGTCAGTAATACAAATAAATAA 62078 37 97.3 36 ..........T.......................... AATTCAGCTGTTTCTGTGTTTGTGGTGTGTATTTCG 62151 37 83.8 0 ............T.....C.....C....C..A...G | AA [62183] ========== ====== ====== ====== ===================================== ======================================= ================== 42 37 99.4 36 ATTGCAGAAAACCATCTATTAAAATAAGGATTGTGAC # Left flank : GATGAAGGTCAAATCAGGATTCAAGATAAAGCTCGTAAACTATTAATAGCTAAAATAATGAATAAACTAAACTCTAAAATTAACTTTAATGATAAAAAAATGAGTTATGAAGATATAATTCTTTATCAAGGCAGATTACTTGGTAAATATTTAACAGGAGAAGAGAAAAATTATGTTGGATTTTCAAGAAGATGGTGAAGATCAGCTAATTTTTCTTAAAATAATATTTTTTTATAAATAATTAATACTTTTTATTTTTCAGATAAATCAATATTTTAGCTAGTTTTCTTTAGATTACTTTTATCATGTGGTTTGGATGATGATGATCTTAGATTATATTAATTATTGCTTTAATTTTAGCTAGTTTTAATAGAAAAGTATTTAAATAATTTGTGCAATAATTTATATACAGAGGTTGGGTGAAGTAAAGTTCACAGAAACTGTCACTAAATACAAGTTTTTTGCATAAAAAAGTGAAATTTTAAGAAATTTTCGTGGCT # Right flank : GTTTTTATCATGATTAATATTTCCAGTTGATTTTTATAAAGTAAATTCTAAAAAGATTATTAACAAATTGTTGCAGGGTTATATATGAATGTTGAAAGTTTGCAAATCATTTCTAAATTTATGAATGATTATGAATATGAAAAAGCTATGGAATTATGTGATGAGCTTTTAAAAAAAGATAATGAAAACAGCCATCTTTGGGCTTTAAAAGGATGCTGTTTAAATCATTTTGAAAAATATGTTGAAGCAATGGAGTGTTACAACAGATCCCTAAGCGAGGATGATGAAAACCCTTTTATCTGGTTTCATGTGGGTAAAATTTTAATGGAATATGATTTATTTGATGATGCTTTGGAGTGCTTTAACAATTCATTGGAAATTAATCCTGCTGATGATATGGCGCTGTATTCAAAAGGGGAGTGCTTAATGTTTAAAAAATCATATACTGAAGCAATTACCTGTTTTGATTTGGCTATTGGATTTAATCCCAAATATTTGAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGAAAACCATCTATTAAAATAAGGATTGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //