Array 1 101582-102938 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBFB01000005.1 Streptococcus mutans strain PKUSS-2 C185, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 101582 36 100.0 30 .................................... GCTTCACTAAAACTCATAGCATATACTATA 101648 36 100.0 30 .................................... TTGCATTAAAATTTTGTCCTTTCGTCTTTT 101714 36 100.0 30 .................................... CAACAGCTAAAGATGTCGTTAAACTCACAA 101780 36 100.0 30 .................................... TTGTATACTCGCGTGACTACCGAAAATCTT 101846 36 100.0 30 .................................... TCCTAGAATCCAATGTTCGGCTTGGAGCAT 101912 36 100.0 30 .................................... TGACTTAACATCTAGGTAATTAACCCCAAT 101978 36 100.0 30 .................................... AGCGGTCCTCAAGGAACAGGTGTGGCACGC 102044 36 100.0 30 .................................... AAAAGCTAAAAACAAAGATATACTTGATAG 102110 36 100.0 30 .................................... GCAAAAAAAATAAGTATGTATTAGAGGAAG 102176 36 100.0 30 .................................... AATCGCATTCAAAGGGACTTTGAAAACACG 102242 36 100.0 30 .................................... TTTCCTCTGCGCGCAACAATCGCAATGTCG 102308 36 100.0 30 .................................... TTACTTTCAATGCTTTAACTGCATCTTCAT 102374 36 100.0 30 .................................... GTCAAAATCTGTGTATTTTATCATTTGAGT 102440 36 100.0 30 .................................... ATTTAATTAAACACAAAAAAAGATATAGTC 102506 36 100.0 30 .................................... TAGCTTGACTGACAACACTAAGCGTTATCT 102572 36 100.0 30 .................................... TGTACAGAATGCAAAATAAAAAAGATGAAA 102638 36 100.0 30 .................................... ACTTTTTAATAACGCTTCTATGGAAAAGAA 102704 36 100.0 31 .................................... TAAAAGGTGTTGGTAAGTTTGCTGGTGGTGT 102771 36 100.0 30 .................................... CGTTGTTAAACTCACGACTGATGTTGACCT 102837 36 100.0 30 .................................... AATAGAATCAAATTCTCCTAAGTCAGTTAA 102903 35 75.0 0 ..........CA.......A.TG..-T.A.T..... | A [102919] ========== ====== ====== ====== ==================================== =============================== ================== 21 36 98.8 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAATCGCTAGAAAGATTGATTTCTAGCGATTTTTTAGGTATAATATCAGCAATCAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATGAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : CGCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTATTGACGTCCAAAGGTTTGATACAAATCCTTAGCTTTTATCACATTATCCCAATGAATAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //