Array 1 88243-88397 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045740.1 Streptomyces sp. SUK 48 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 88243 33 84.8 28 .............C.......G.......TG.A AGAGGTGTGCCGTGCTTGGGCCTGGTGC 88304 33 90.9 28 .............................CT.G TGCCGCATGACACCGGCCGCACGTGGAG 88365 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ============================ ================== 3 33 91.9 28 GTCCTCCCCGCCGACGCGGGGATGTTCCGAACC # Left flank : CCGAGACGTCCAGACCCTCCTCACACCGCGCGACATGAACAGCATCGACGTGCACACAGACGACGATGAGCCGCAGGAGAAACACGACGTCCAGATGGTCCACCTCTGGGACCCCAAAGCCGGCGTTCTCCCGGCCGGCGTCAACTACGGTTCAGGAAACACCTGATGCCCTCCATGATCGTCATCGCCACCACCGCCGTTCCCGACCACCTACGCGGCGCCCTCAGCCGATGGACCAGCGAAGTCGTCGCCGGCATCTTCGTCGGCAGCGTCTCCGCACGCGTCCGTGACCAACTCTGGCAGGCCGTCACCGAAACCGTGGGCGACGGAGCTGCCGTCTTCGTCCACCCCGCACCAACCGAACAGGGCTACTCGGTCCGTACCGCCGGAACACAACGCCGCGTCCCCGAGGACTTCGACGGTCTCACCCTGATACGGATGGGAGCCGCAGCAACCGCAAAGGAAATGCAAAATCGTTCTTAAGACGCAGGTCAGGAAGC # Right flank : CGGGAGCAGAACCAGCGAGACCCCGGCTCGGTTTAGTTCTCACGCCGAATACAGCCCCGGTGGCTGCGCCGTCAGCGGGCGCACGAGGAGTGTCGGCAGCCTGTCGTCCACGGCGCGGCCGCGGCCGTGTCGGTGCGGGCGGCGGTCTGCTCGCGAAGCTTCTCCAGTCGCGTCGCCAGCAGGTATCTGGCCACGCGCTCCCGGGCCGCGTCGGCGGCCTTCGTCGTGGCGGCGACGGCGTCCGCGCCGGTCGGGTTGTGCTGGAACCAGGGACGGCCCTGCTCAGCCTTGAACTCCCGCCGGGCCTCGACTTCGGCCGCCTCCGTCCGGCCCAGCTCCGCCAGCGCGGTGTCCTGGAACTCCTGGACGACCTGCCGCGCGGTCTCGAACGCGGTGAACGCGTACGCGTCCCTCGCAACCCCCGGGTCGGCCTCGAGGGCGGCCACGTCGGTGATCTGCAGGAACTCATGCCATGCGGCGGCGATGCTGCTGTCGATGGC # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGATGTTCCGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 8265475-8266174 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045740.1 Streptomyces sp. SUK 48 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8265475 29 96.6 32 ............................T TCCTGGACCGGTACTGGAGCTACCGGCCCGGC 8265536 29 100.0 32 ............................. AGGCCCGCCACCCGGTCCATCTGATCCCGGAA 8265597 29 100.0 32 ............................. GGTGCCCGGGTGCGCTGCGACGGACGCCTGTA 8265658 29 100.0 32 ............................. CCTCGACGCCGAGACGCTCAGCCGGCGAATCA 8265719 29 100.0 32 ............................. CTGATGCAGCGCTCCCTGCGCTGGGTCGAGGA 8265780 29 100.0 32 ............................. GCGGTCGGGCGCCGCTTCCAGCTGGCCCGCGA 8265841 29 96.6 32 .....................G....... AGCTGGTGGTCGCTGACGTCGAACGGCCCGAA 8265902 29 100.0 32 ............................. CAGAGCGCCCGCGCGCTCCAGAACGACGGGTC 8265963 29 86.2 32 .G...T.....G.............C... CGGCACGGGCCGATGAACTCCACGATGGCCAG 8266024 29 89.7 32 ...........G..T..........C... ACGGGCGACAGCACGGTCGACCACAGCCACGA 8266085 29 96.6 32 ...........G................. GCGGCCCGTATCTGGGCGAGGATGCCGGACAC 8266146 29 86.2 0 ...T.......GT........G....... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 96.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTCTGCCCAGCCTGCCTCCACTGGCCGCTCTGCCGCACATGCCCCGGCCCAACCCCCCGGCGCGCCCGCCCCGACAGCGACGGCCGCTGCACCACGTGCGCCTCCGTACCGGTCGGCGAACTGGAAGGAATCAGCCCGTGACAGCCACGTCCACACCCCTTCCCGGCCGAGCGGCACAAGCGGTCCTGTCCATGAACGCGCAGTCGGACAGGGCTTGAGGCCGCGGCCTCCATCACAGCAGCCCAGCGTCCAGTCGGCGCCCTGCCGGAGAAGCCGCATGGCTACAGGAGAACCCTGAGACCATTGGACCCAAAGCCGTCTCCGCTCGTGCATGGATGAACACCCAGGCAGCCGGACGATGCAGCGGATGTCAGGCCTTCGAATTACGATGCTTGCTTGCTGCCACGACATGAAGAGGTAGGCGATATGCGGCTTTTGTCGGAAACTGCAAAAGTCCACGAAAAAGCGTCTGTGGAGCGATAAAGCCCCAGGTCAGGAAG # Right flank : CACGACTGGAAGCAGGCTGTCGGGGCGTCTGGCGGGTGTTCATCGGTAATGCCTCCGGCGTGAGTTCGGCATGGTGGGCGGGACAGTGACAGGACTCATGTGCTTGCGTCTCGTCCTGGCGGCACGGCTCTTTCACCCGGTAGGGCCGGGAGCCGGGACCCGGACAGCAGCGGCCGGGAAGAAAGATCCCGGGCACGACGAGGCCCGGACGCCGGGTCCGGGCCTTGCGCTGTCGAAAGGGGCTTCGGGGGTCGACTGCCTGTAAGAACCTGCTCCTGAGGCCGACATGACAGCGCCCCTATCGGGTCAGTCTTTATGGCCTGGGCTCACGCACCGCGACCAGTCCAGCTCGCCTCGCGTTCCGAGTTCGTCGATGATCATGCGGTGGAGCCGGGCCCAGACCCGGTTCCGGCTCCACTGAGCGAACCGGCGGTAGACCGTCTGCCAGCTCGGGCCGAACACCGGCGGCAGCCTCCGCAGGGTAGCCCTCAGGGGCCGGA # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 8267516-8268643 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045740.1 Streptomyces sp. SUK 48 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 8267516 29 100.0 32 ............................. TCAACGGACTCGACATGCCGGCCAAGGCCGAA 8267577 29 100.0 32 ............................. GTGATCGTGTCGATCGCGTTGAACGGCCCATC 8267638 29 100.0 32 ............................. TCCTTCAGGCCGGGCTTGATGCAGGCGGCCAC 8267699 29 100.0 32 ............................. GACGGCGAACCGCTCCGGGAAGGGCCGGACGG 8267760 29 100.0 32 ............................. GCCGGACTCCAGACCTACTACGCCACCCGTGC 8267821 29 100.0 31 ............................. CCACGCCCACAGCCGCCGCCAGAGCAGGCCG 8267881 29 100.0 32 ............................. GCCTGGGAGGACTCGCAGGAACCGGTGGACTC 8267942 29 100.0 32 ............................. AAAGCGGGTGTCGACGGGTCGAAAACGGTCAA 8268003 29 100.0 32 ............................. GAAACCCTGGCCGCGTCGGGGAATCGTGGGAA 8268064 29 100.0 32 ............................. AATCCAGTTACCGTCCGCGTTACGACTCACCT 8268125 29 100.0 32 ............................. GTGACGGCGTGTGGGCGTGGGAGGGGAACAAG 8268186 29 100.0 32 ............................. AGGGCGTACTGGCCGGGAACCGGGTCGGTGAT 8268247 29 100.0 32 ............................. CGTGGCGATGCCTGCCGCTCTGCGGAGCGTCG 8268308 29 100.0 32 ............................. ACGAACGGCAGCGCGGAGGGAGATGGCGTCTA 8268369 29 100.0 32 ............................. GGCGGACGCAAGGGCGGAGGCAACGCCCAGAC 8268430 27 86.2 32 ..............--T........G... CGCCGCCCGGCGGGTAGTTCACGTCCCAGGGC C [8268455] 8268490 28 86.2 35 ......T...............-..G..T TACGGGCATGTCGGTGACGACGCCGGTGCCGGGGC 8268553 29 75.9 32 ...T.T.T..T...G......G...C... GACGTGGTCGGTGGGCTGGGCATGAAGTCCTT 8268614 29 79.3 0 .....G....T..GT...........T.G | C [8268639] ========== ====== ====== ====== ============================= =================================== ================== 19 29 96.2 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : TCGTCCCAGGCACCGTCATCGGTGGCCTCTGGTTCGTGTTCGGTCACTTCAACGGTGACGGTGACCGGGCCGGTTTCAGTTCCGGTCATGACGACGGCGAAGTCACCCGGGTCGTGAAGAATCCCAGGAGCCGCCATGGGCGCCACGAGACCATTGAACCCGGTGTAGTTCCATTCGCCGACGTCGAAGACGTCGCCGTTAATCCAGTACTGATTGTTACTTGCCCAGATGCGGGCGGTCGCCGAGATCACAGCCACCTCCTCCTAGGCGGCAACCCAGAAAGGGTCACCGTCAAGTACACGGTCCGACTTCCAAAAAGCGCCTACGCGCCCGCCCTGCGAGTTCTGCTCGCTTGTCGGCACCCAGGCCCATCCCCAGTCGGGCTGCTTACTCAGAGAGGCCCCCTGGTTGGTCTTCGCGAACGGGTATTCGTCGCAGGACTTGCCAGCTGGACGCTTCCGCGACGGGGGGCAGGCTACCTTGCGGTTGTTGCTCTCCAC # Right flank : GCGGCGATACCGCGGTATGCGAACTGTTCTTCGTGTCCGGGGGGTTGGGGCTTGCCGGTGGGTGTGTGTCCGGGTTGCTTGGTGTCTGAGGGGTCGTTGGTCTTGTTTTCTTCGTTGTGGCTTCGCTGTGTGTTTGTGTCCTGTATGTATCTGGCATGACGGGCGAGGGGGGTGGCCTGGTGGGGGTTCGTGCCCGGTTGGGTGGGCCGGCGTCGTGTGTGTGGGCCAAGCATGATCGTTGTTCGGATGGGTGGCTGCCGTTGTGGCGGCATATGGAGGACAGTGCCGCTGTGGCGGGGCGGCTGTGGGATGAGTGGTTGCCGTTGTCGGTGCGGCGGCTGATCGGTGGGGTGTTGCCTGGTAGGGAGGCGGATGGGCGTCGGCTGGTGGTGTGGCTGGCTGCTGTGCATGACATCGGGAAGGCGACGCCCGCGTTCGCCTGTCAGGTGGAGCAGCTTGCGCAGGTGATGCGTGGCCACGGGCTGGAGATGCGGTCGCGG # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 8278997-8279696 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045740.1 Streptomyces sp. SUK 48 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8278997 29 100.0 32 ............................. TCCCTGCCGCAGAACAACGACACCTCGATCGA 8279058 29 100.0 32 ............................. CCATCCCCGTCATCACCCCCGTCGTCCCCATC 8279119 29 100.0 32 ............................. ATGGCGGACATGGAGAACGGCGTGTACGGGAC 8279180 29 100.0 32 ............................. GCGCCCGCGTCCGGCTCCGGCGGCACGATGTA 8279241 29 100.0 32 ............................. AACGGCAAGACGTACAAGAACCGCGAGCATGC 8279302 29 100.0 32 ............................. CACCGCCGCATGACCGAACCCCGCTGCACCTG 8279363 29 100.0 32 ............................. CAGGACCGCACGAACAGCATCCACCCGATGTC 8279424 29 100.0 32 ............................. TCGTCCTCATCATCCGCGGACTCGCCGCCGGC 8279485 29 100.0 32 ............................. GAACGCCGTCCACTCGTCGAGCCGGCCGTAGT 8279546 29 96.6 32 ............................T CCCGCAGGACGTATCCCCGGTAACCACTGGGG 8279607 29 100.0 32 ............................. GGTATCAGGCTGATACCGCTTTGGGCATGGAA 8279668 29 96.6 0 ........................A.... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.4 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CGGCGGCGGCACCGACGACCACGACGCCTACGCCGACGTGGAGCACACCTGGTGACCGTCATCGTCCTGACCAACTGCCCACCCGGCCTGAGAGGCTTCCTCACCCGCTGGCTCCTCGAAATCTCCGCCGGCGTCTTCATCGGCAACCCGTCGGCGCGGATCCGAGACCTACTCTGGGACGAGGTCCAGCAATACGCCCACCAGGGCCGCGCCCTGCTGGCCCACACGACCAACAACGAACAAGGCTTCACCTTCCGCACCCACGACCACGGCTGGCACCCAGTCGACCACGAGGGCCTGACCCTGATCAGACGCCCGCACGCCCAGAAGCCATCGAGCCCCGCGACCACTCCACCCAAAGGCTGGAGCAACGCGTCCAAACGACGGCGTTTCGGCAGGAAGTAATGAAATACCTAAAGTTCCTTATGTGCGGTTTGTCGGAATCAGTGAAACTGATGCAGAACCCACTGGTCTCGTGACGAAACCGCAGGTCAAGGAGT # Right flank : CTGGTTCACGATCGGGCGGAAGTCTCCGAACGTCGGCTCCTTGTGCCTGCCCGTAGGGATGTCCCCGTCGTGGTGGCCTTGAGTCCTTCCGCATGTCGCGAGATGTGCTCCTCTCATGGGTCAGTTCCTGGGTGCAGGTCGACCGTGACCCCTGTGGTGCATGCCGGTGGCAGCGTTCGTCCCGTTCGGGGCTGGGCGCCGCGGTTGTCGGATCTGGTGGGGGTGTCTGGCCTGGCTACTGCCAGCCGTGCAGCGTCAGGGTGCTGGTCTGGGTGAGGCAGCCACGCAGGCCGGCGGCGGGGTACTCGATGATGTCGTCGGGAAGGTCATGGTCGGCGAACCACTGAAGCGCGAGGCACTTCTCGGGTTCCTTGTTGACGGGTGTTCCGTCCCAGTGGATGGCCTCGAAGAAGAATCCGATCCGTTCGGTGCCGTCTTCCTGACGGTGGTGGACGATGTGCCGGAGTTTCAGGAGGCCGGGGTCGGTCTGGACGCCGGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //