Array 1 555-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKP01000059.1 Prevotella scopos JCM 17725, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 554 37 94.6 38 CA................................... TTAGGTGTTGAATTTGCTTTGAATTGATTTAGGTTTTT 479 37 100.0 38 ..................................... AGACCATTAAGAGTAGTGCGTTGGTGAGAGTACTCTCA 404 37 100.0 37 ..................................... CGAGTAAAGAACGCAGGATACACAAACGTATTGCAAT 330 37 100.0 39 ..................................... TCATTTGTACTGTATTTCATGTGCGTGGTCGTTCTGCAC 254 37 100.0 35 ..................................... AATGGTGAAAAACGTGAATGGGTTGAGGCTGTTAC 182 37 100.0 35 ..................................... AAGTTTTTAGTTATTGTTATTAATCCTCTTAGTCG 110 37 100.0 34 ..................................... TTGTTGCTCAGTTTCGAGACAATGATGATGCTGC 39 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 99.3 37 GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Left flank : TGATGAGCTTTAATGTAAGCATAACGTTCTAATCTTTATTTTAATTTGTTTCTGAGAGCAAAGTTACGAAAAAACTTCTATAAGTCAAAAACATTTATATTACTTATTTTGTTATTTACTTGTAGGAATGGAGGGGGTAGTTGGTTCTGTTTATGAAAGAAGTATTTACGAAAAATAATGCCATTATAAATGCTTTGCGTGTTTATAATTTTGCTATTTCCCAAATATGGAGTGATAAAGTCTACTGAGTTAGAAGAAGATTTATGGTGATTTTTATGATAGTAATGTTGTTTTTAATTTACTGTCACTTTTAACATATCTAACAAATCTCCTGTTAATCAAGTGTTTGTATGCGTGTGTAGGCTGAAAGGAGTGACAGGAAATTTAACTTGAGAAAATAGCTTGCTATAATCTTAGTTAAGTCAGGAGAACTTATGATATATGTGAACTCTGTTATTTCTTAATATCGGGGGAATCTTTGTTATAGTACTATTAGATTA # Right flank : GAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 14274-14454 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKP01000063.1 Prevotella scopos JCM 17725, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 14274 37 91.9 34 ..A............T..............T...... TTCACTATCTTAGGTATTGCGGACTCTCTCAATG 14345 37 100.0 36 ..................................... TATATCTTTGAAATTCTGCAACAAAAACATACTTCC 14418 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 97.3 36 GTCTTAATCCTTGTTCTAATGGAAGATACTCTCTGAG # Left flank : AGGGAATCTCTGAACGCCGTAAAGGTGTGTCAAACTGTATGGTTAGTGTTTTTATCTTAGTCATTCTTTGTTTTCATATCTTAGGTAATGTTTATAGTGACTTTGTCGCTAAATCTCTATCTTTCTTATCAAGGAATTTCTTCCGGTGAAATGATTTATGGTGATTAGGACTATGCATGCAAAGATATAAAAAATTAATAAATTGTGCATCATTTTTTATATTTTTATTAATGAAATAGAAAAAGTATTCATGATGTTTACCATTTTCCATGTACACTGAACATGCACATTGTTGAATGGGTACAAGAAACCAGTAGGCTTAATAACGAAAATTATATAGTCAAGTGTTTGCGTGTTTATCGTATGGTGAAATCAGAATGACGGCAGCAACAGACTTCTAATATCTCACGTATAGGAAGTTTATTTAAGACATGTATCCATTGATGAGATTGAAAAACAAGTCAATGTTCAAAAGTATGAGTTAAGGATAATTGTTGCGA # Right flank : GTCCTAAAGGTTGAGGACGCAAGAAGGGTTTTAGCGTCTTAATCCTTG # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 23787-23109 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKP01000048.1 Prevotella scopos JCM 17725, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 23786 37 100.0 35 ..................................... TGGGCAAGTACAAGCTACTGTATAGAGGGTAGCAA 23714 37 97.3 33 ...............C..................... TCTATCTTGTGGAATAAAATGAGAAAACTTGGT 23644 37 97.3 35 ...............C..................... AAAGAGATATTAGAAACTGCACTTAATTTGTGTAA 23572 37 100.0 32 ..................................... TCATCTGAAATGAACTACGATAAAGACAATGA 23503 37 97.3 32 ...............G..................... ATTAAGATTGGCGATAAAGTTTGTAACAAAGA 23434 37 100.0 35 ..................................... CGAATCAAAGCTGATACGTTCTACAAGTTAGTTAA 23362 37 97.3 38 ...............C..................... CAAACAAGTTTGGGTACAAAAAAAGCAAGTATCTATAA 23287 37 97.3 35 ..T.................................. CCAGGCTCAACCAACTCTTACGTGGGAATTGAGCT 23215 37 94.6 33 ..T...............................A.. TCATCCAGAGATGTCGTCTGTAGATGAGGCTGT 23145 37 94.6 0 ..T...............................A.. | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 97.6 34 GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Left flank : GAGACATTCGTAGGCTTCGAGAAACAGACAGCAA # Right flank : CGCAAGACATACGAATCCTTTGTATAAGCGGGATTGGTATTTATAAGACCAATAACGCATGCTCATGTTAACAGAATTTAACTACCTTCTAAGCGAGTGCAAAGGTAGTAATTTTTAAGCAAAATGTCAAGGAACGCTGGTTAAATATTATCAACCAAAGGTGACTTTTTTATAGGTTATTGCCTATCTGATGTGTCCAAAAGCGAGAAGTGATATCCTCAAAGCTTCCATCTGTGCAGCGGCGGTACATTCGTTGATTGGTGCGTGGGAAATCGAGTCCACCAAGATGGCGGAGGTAGGCTCCCACTTTGATATAGTCGAAATGCTGTTGATTGATGAGCGGAGAGATTGCTGTGCGCCCTGTGTACCAACCAACCTTCAAACCGTTGTGACGTTCTTGGACATATTTTGCAAGCAGGTCAACAGCCGCTGGGTCACCATCGCCACCCATAAAACCCACATAGGTAATGGTATCTTTCGCACCATGAATCAGTGCAGAC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Alternate repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCAGAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1258-1580 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKP01000044.1 Prevotella scopos JCM 17725, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 1258 37 100.0 35 ..................................... GATTTTTTAATTTTCGTACTCATAAACTCTTTATT 1330 37 100.0 36 ..................................... CTCCAGTCTCTACCCGTTTGACGTTTTACCGCCTTG 1403 37 100.0 35 ..................................... CCGTATGTTTCTGTCCATTGCTTGGTTATCTTGTA 1475 37 100.0 32 ..................................... TAGGTGTTTTTTTCATATGAAAGTAAAAAAGG 1544 37 89.2 0 .....................T.........A..T.G | ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 97.8 35 CTCTGAGAGTATCTTCCATTAAAACAAGGATTAAGAC # Left flank : TCGGCGCTGATTCATGAAACGAAAGGTACGATAACATGTGTGGGATTTATGGGAGGCGATGGTGACCCAGCTGAAGTTGACCGATTAGCACAACACGTCTTATCTCATCACCCGCACCTGAAGATTGGTTGGTACACTGGGCGTACTGCAATCTCTCCGCTCATCGACCAACAGCACTTCGACTATATCAAAGTGGGACCTTATCTTCGTCATCTCGGTGGACTTGACTCTCCTCGCACCAATCAGCGGATGTATCGCCGCAGCCCCGATGGCAGCTTTGAGGACATCACCTCCCGCTTTTGGAAAGCCCATGACGACAAGAACTTATAAAAAAGTTGTCTTTGCTTGATAAGATTTATCCCTGCGTTCCTTGACTTTTTGATTAAAAATATCTACCTTTGCACTCGCTTAGGAAGCAGTTAATTTCTGTTAACAAAAACCTATCTGCTTGGGCTTATAAATGCCAATCCCGCTTATATAAAGGATTTGTATGTCTTGAT # Right flank : GAGGTGGCAAGTTTGAGAAATATAGTAATTCTTTAAGCATAGTACTTCTTCCTCTTTTAGCAGTACTCTCACTTTAGGAAAGGTCAGTCAGAAAGTAGTTTGTAAGAAAAGGTCTGCAACTCTTTGCCTTCAACTTTGGAATGATTATCTTTGTCATTGCGTTCACGGCTACTCCTTGTGATGGTGGGTGTGTTTTATAAGCCACTGTAAGTCATAGAGTAACTAAATAATGACCGATTCGGGTTTAAGACAATCATCATGGTGAAATTGTAATATATGCACAGCGTTCTCTAAGTGTAACGAATGATTTAAGGTTTCTCTGGCTCTTATATGTCTGCTTAATCAGCAAAGACAAGTTGAACTAAAATAAGTTTGCTGTCATTCCTGTCACCTTTAACAAATGATTATAAGGCTGATTCACAATGAGTTATCCCAGAATGTTAAAAGTGACAGCAAATGAAAACAAACTTATTGTAGTATATGTTTAACCCAAATCGGTC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGAGAGTATCTTCCATTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 251-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKP01000041.1 Prevotella scopos JCM 17725, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 250 37 100.0 35 ..................................... AACACGAACATAGTTCTCTTGAGGAACAACGTTCA 178 37 100.0 35 ..................................... TGCGTCTTTGCAGATGTAACCTGTAACTGAAAAAT 106 37 100.0 34 ..................................... TCTTAAAATATATTGTTTGAAGTACTTCATAAGT 35 35 94.6 0 ...................................-- | ========== ====== ====== ====== ===================================== =================================== ================== 4 37 98.7 35 CTCAGAGAGTATCTTCCATTAGAACAAGGATTAAGAC # Left flank : TCAGTCGAAGCCTTAAACCCATCCTATCACATTGATAGATATAATCTTACCCTGTTTTAATCAGCCGTAAATCATGATATTTAGAATTAAAAAGTAAGCAAATGTTTCTTTTAGTCCTGATTTCCATAGCCTGAAACCTTGACACTATTTCATCTCCTCTGAGTAGTAGTTTTTTTGTTTTGCCTGTCAGCTTATGATTGCGATACACCAAGACGTCACTAAATAAACGACTACTTCCTACGAATATTACGAACATTAGTTTATTCGGGGCAATCAACTCACACAAAACGTTATAGAGTCAGTTTAAGGGAAAAATGTAAGTCTGATTGAAAAAGCAGCCACAAAATAAAGCATATTTAACAAATTATCATACACAAGTATGATTCTTTATTTGTACCTTTGCAGCCGAAAAGAAAGCAGTTAATTTATGTTAACAGGAGGCTTTTTTAAGATCAAAGACACTTCAAATAGTGATAAATAAAGGAATCTAAGTCTTAGCT # Right flank : G # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAGAGAGTATCTTCCATTAGAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 32-384 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKP01000024.1 Prevotella scopos JCM 17725, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 32 47 100.0 30 ............................................... TACCGATTGTATAAGGTAAGGCGAGTGCTA 109 47 100.0 29 ............................................... GAGTTATCAACAAGAGATCGAGCTGATTT 185 47 100.0 29 ............................................... ATCCGAAAAGGTTTATAAATTCACGTTTG 261 47 100.0 30 ............................................... AATTATCGGCTTAAATTCTCCTTGCTTATA 338 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 100.0 30 GTTGTGAATTGCTTTAAAATGTGTATCTTTGCAGTATTACGCACAAC # Left flank : CATGTATTCACGCTTCAATTTCGCAGAAGTAG # Right flank : CCGAAATCAGATATTATTCTGATAATCAGAAGCTAACAAGACATATGTGCAAAATAAAAACTGCTATTTAAAAGAGCCCTGTCATCATTGACAGGGCTCTTTTTTAAAATAACTCAAGCTGTTGACCTGGAGCATTTGGCTCTTTGGGTTGTGTTCCGCTAAAAAGTTCTATTTCCCCAAACTGCTTATCGGTAATAACCATTATGCAAATATTTCCAGAGTTTGGCATAAAAGATTTTACACGCTTCACATGTACGTCTGCATTCTCTTTACTTGCACAATGCCGGACATAGATTGAAAATTGAAACATCGTAAATCCATCTTTCATCAGGTCTTTTCGGAAAATCATGTACGCACGTTTCTCCTTATTTGTATTAGTTGGAAGATCAAAAAAGACCATCACCCACATAACCCGATATTCACTTAGTCGTTGCATCAAAGAAAAGAAGGATAAGATATCTCACGAGCTTCTCCATTATAACATTTAACAAGACTTGCAG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTAAAATGTGTATCTTTGCAGTATTACGCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 40807-41490 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKP01000029.1 Prevotella scopos JCM 17725, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 40807 37 89.2 34 C.A..T.C............................. CTCATTTCGAGGAGAATTATAAAGATTAACTAAA 40878 37 94.6 34 ..T............G..................... TTATGATTCGCCTAATACCAGAACTGGCTGATTA 40949 37 97.3 36 ..............................T...... GTCGGTGGTTAACCTTCGTCAGCAGTTAGTTGGTGA 41022 37 97.3 34 .............................C....... AGTTGGATGCAGTAGTAGCTAATGGTGGTAAGCA 41093 37 97.3 34 .......................T............. TGGCAGATTTTTGAACAACAACGCTTAAACAAGT 41164 37 97.3 35 ...............C..................... TAGCAGACTCATAATCAGAAGGTCATAGGTTCAAG 41236 37 100.0 35 ..................................... AGATTATAATCGTTATAAAGATAGTGTTATATGGG 41308 37 100.0 34 ..................................... ACACTTCGACGAAGATAAACTTTTTTAATACTAT 41379 37 100.0 38 ..................................... AATACACAGCTAGAAAAGTGTAAAACTTATAACAGAAA 41454 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 97.3 35 GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Left flank : CTATCAATCCACTTCTTAAGTGGAGTGAGCTTGACAACATTAGAGGCTTCAAGCACATAGAGTTTTCCTTCCTTTTCTACAATCACACCACAATGTGACCACGGAGAATTAGTTGCTAATTGAATAAAAGGCGACTGACGACTTTGCGATACTTGAAAGATTAAGTCTCCTTCCTTAAAATCATTCGTCACTCTTGGAGTTCGCTGCGCATACAATGCAATAGCAACCAATAGTAACATGATTATTGTCTTAAACTTTTTCATTATTATTCTGTAATTCTTTGACTTACAAGGACTCTAAAATTACATTTCCCATTATTTAGGAGTAGCCGTAAAGCGATTGCAAAGGTAATGATTCTAAAACAGAATGTCAAGCGGAGCAGACTTTTTCTTATAAGCTACTCTCTGTCTAATGTTTCCTAAAGTGAGAATACTACTAAAAAAAGTAGAAGTACCATGCTTAAAAATACTAAGCAATAATCCACCTCAACTTTGCCAGCT # Right flank : ATCG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //