Array 1 53012-60310 **** Predicted by CRISPRDetect 2.4 *** >NZ_RFCS01000018.1 Acinetobacter baumannii strain TG89548 Acinetobacter-spp-TG89548_183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 53012 30 93.3 30 ............................CC AATGTGCGTATTTATCGCCTATCCAGAGGA 53072 30 96.7 30 .............................G ATGCATCAAGAACGAACTGTTGAAGATGTG 53132 30 96.7 30 .............................T TCACTAAAATATCTAACTCAGTTCTTAAAG 53192 30 100.0 30 .............................. TCGGTTAAAGATGCAAATGGTGAACAATCT 53252 30 93.3 30 ............................GC TTTGATCAGTAACTCAATGTATGAGTCATC 53312 30 96.7 30 .............................T ATCGAAAAATGGGAGTATAACCATGCATGA 53372 30 96.7 30 .............................T CGCAAAGATCATTAATCAAGGTCATGATGC 53432 30 100.0 30 .............................. AGAAATCAAAGACTTATCTGGTCAGGTTGA 53492 30 96.7 30 .............................T TGGTCAAAATCATTCACACAACCATTCACA 53552 30 100.0 30 .............................. TCGAAGAAAAGGACCGTCGGTTCTTAGTGC 53612 30 93.3 30 ............................TT CAGAATCACCGCATCGAGAACGTGTAATTA 53672 30 100.0 30 .............................. CATTCAATTTGATCAAACGGAATTCATGTT 53732 30 96.7 30 .............................T TAGATAATCATCACCCAGTATTAAATGTGG 53792 30 96.7 30 .............................T TGCGTTTTTGAAAGGTCGCCATTGTTTAAA 53852 30 93.3 30 ............................TC TTCCGTGTTAACAATTGCTTGAGCTATTGA 53912 30 96.7 30 ............................T. ATTGAAAATGCTCAATATGTAAAAGATTTT 53972 30 96.7 30 .............................T GGTGTAAACGACAATCTCTTAACCTTCCCC 54032 30 96.7 30 ............................T. AAGGTTCCTACTAACTACAATCCAGCAACA 54092 30 96.7 30 ............................T. ACGGTGCACGAACTGTTATTAGCGGCAAAA 54152 30 96.7 30 ............................T. CAGACCGAACACTTCTAAATAACTATGCCG 54212 30 93.3 30 ............................GT TACGTCTACGGTACGTGGTTAGCATGATTT 54272 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 54332 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 54392 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 54452 30 93.3 30 ............................TT GCTCTAAGCATTCCGAAGCAAGGAAATGTG 54512 30 96.7 31 .............................T CACATTTTGGGATGGCAATAGCATTATTTGT 54573 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 54633 30 100.0 31 .............................. TTTCATGCTTATGTGCTAAATTCATATTTCA 54694 30 93.3 30 ............................GT GTATTACCGTCATTTTTATGATGGTACATG 54754 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 54814 30 90.0 30 ...T........................GT GTTGTAATTTCGCTTGTATTGATCATTGCC 54874 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 54934 30 96.7 30 ............................T. TGATCTATACATTACAACAAGCAACACAAA 54994 30 93.3 30 ............................TC AATGTTATATCACATTAGATTAACAAAACA 55054 30 93.3 30 A............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 55114 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 55174 30 93.3 30 ............................GT CGGTCGAATGTCTGGGACTTTTTTGTTATA 55234 30 100.0 30 .............................. AGGCATACACCCAGTAGAAGATAAACAAAA 55294 30 96.7 30 .............................T ATATGTGCGTAACCGAGCAAGCTTGTCACG 55354 30 96.7 30 .............................T ACCGAAAGATGACAAAAAGCACCCTAAGGT 55414 30 100.0 30 .............................. GTGAAAAAAGCTGACAGCAAAATAAACTCA 55474 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 55534 30 93.3 30 ............................GT CCAAGTCTTAAAGATGTTCAATGGGCAATG 55594 30 100.0 30 .............................. TCGAATCAAAATATTAAAGAGTTACGTCAT 55654 30 100.0 30 .............................. TTCGTGTTGACCAGGAATTAAAAGACACTT 55714 30 93.3 30 ............................CT CAAAGTATTTAACACGGTTGTTAGCAGGAT 55774 30 96.7 30 ............................C. AAAAAGAGCTTGCATATACAGATTCTAGTA 55834 30 93.3 31 ............................TT GGTGTTGAACAATGCTTAAGTGAAATCACAA 55895 30 96.7 30 ............................T. TATCAATCTTGTTAAGAGAAGCCGCATCAT 55955 30 93.3 30 ............................GT GATGTGTATGTTCTATTAGTGGTGTAAATC 56015 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 56075 30 96.7 30 ............................T. GTCCCGAAATTTCAGTAGGTGGCTCATAGC 56135 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 56195 30 96.7 30 ............................T. ATACACCAATCCCGCTTAGAACTTGTAAAT 56255 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 56315 30 96.7 30 .............................T CATCATTGCAGTCTTATAAGAGCCAGGCTG 56375 30 100.0 30 .............................. ACTGCATAGATGACCATTAGAGACATCCCC 56435 30 93.3 30 ............................GT AGTGGGGACATTGTGTACGCTCATGATGTT 56495 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 56555 30 96.7 30 ............................T. CTAACTGTAAAACAGAAGACTTGCCAACTT 56615 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 56675 30 100.0 30 .............................. TGGCATTTGCTGCTGACGGGGATTTCGACT 56735 30 100.0 30 .............................. ATCAAAATCGTGGCAGATAACAAAGCGATC 56795 30 96.7 31 ............................T. ATCTCGGTATTTACGCCAAGGGCGCTATTCA 56856 30 96.7 30 .............................T GATCTACCCTTTGAGCTAGATAAAACTTTT 56916 30 93.3 30 ............................TT CACGTGGTACGCGCTGTAAGCCTGTTTGTT 56976 30 93.3 30 ............................TG AGTATCGCAAATCAAACATTGCCAAGCTTT 57036 30 93.3 30 ............................TT AGATAAAGCAGGGGATAAAGGGACGTTAGC 57096 30 93.3 30 ............................TG TAATACTAGAATCTGTATATGCCAGCTCTT 57156 30 96.7 30 ............................C. TTTTGCGACGCGCTGCATCGTTTAGGGATA 57216 30 93.3 30 ............................GT GTCGGGTAAAACAAGGGTAATGACTTGTGT 57276 30 93.3 30 ............................TC TACAAAGGCAATCTGGCTCTTCAATTCGTG 57336 30 93.3 30 ............................TG ATTGCGGACATTTAGTCTGCTGTATTTCTT 57396 30 96.7 30 .............................T CGTGATCAAACCACATGCCTTCATCTTCAT 57456 30 96.7 30 .............................C TTTAAGCGCAAACGAACAGCATCAAGATCA 57516 30 93.3 30 ............................TG TTTCATCTGTCTTGATAGCTTCCCCCATAA 57576 30 96.7 30 ............................C. CTACGGACATAATCGAACATTTCCTGAAGT 57636 30 93.3 30 ............................TT GTGCGAGTGTCTACGAGCCAAGCCGAAATA 57696 30 96.7 30 .............................G TTGCTACTGAATTAGTTGTTATTGCTAAAA 57756 30 93.3 30 ............................TT AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 57816 30 93.3 30 ...........T.................T TAATATAGCTTCTTCCAACTACAATATATT 57876 30 96.7 30 ............................T. TTTGCTACGCCACCAGCCATACCTAGAAGC 57936 30 100.0 30 .............................. TAGAATTAAAACCACGTTGATAATATAGGT 57996 30 100.0 30 .............................. CGTCAATTCAAACGTAAAAAGCTACTGAAG 58056 30 93.3 30 ............................GT CAGTATTACTCCACACTTTTTATATTTCAC 58116 30 93.3 30 ............................TG TACCTCATCAATAAAAATAACTGATGTTTC 58176 30 96.7 30 .............................T AAAATCAACCCGTATTAATACCGAATGCAC 58236 30 96.7 30 ............................T. ATAAAGAGGTTTTTAACTGGTATGAATCGA 58296 30 93.3 30 ............................CT CATGACGATGCTTTTCTAACAAAGTCATCC 58356 30 93.3 30 ............................TG AAAAACGTAACGCTGAATTGCAGGCTAAAA 58416 30 96.7 30 ............................C. GCTAATAAATTTACAAGAATCTGATGTGTA 58476 30 100.0 30 .............................. CTGAAGTGAAAATTGTTCATTAATGGTTAT 58536 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 58596 30 93.3 30 ............................TT AGCCGTTTGGACTTTACCAATCTATATTTA 58656 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 58716 30 100.0 30 .............................. TAGAATTAAAACCACGTTGATAATATAGGT 58776 30 96.7 30 ............................G. ATTGCACTTGCTAAGCCAATAATGCCAACT 58836 30 93.3 30 ............................TG ATGCGGGTTGTCCACCAGTTATGACTACTT 58896 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 58956 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 59016 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 59076 30 100.0 31 .............................. AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 59137 30 93.3 31 ............................TG CATCGAAGTCATAGAACGCTTTGAGTTTCCA 59198 30 96.7 31 .............................G CGACTTTGAATTGATGCCATCTCCGCCTTTA 59259 30 96.7 30 ............................T. TTCAGATTGGCTGCGGCCTCACCTGTAGCA 59319 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 59379 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 59439 30 93.3 30 ............................TT GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 59499 30 96.7 30 ............................C. ATGGATTTAAAGATTTCAACCGCTTGGGAG 59559 30 96.7 30 .............................T CATCGAAATTTAGTTCTAATTCTTTAATTT 59619 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 59679 30 93.3 31 ............................CT GAATAAGTGAGATGTCTCTATGAGTTCAATT 59740 30 96.7 30 .............................T TGAATTAATACGGCTTACTGCAATTGGTTG 59800 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 59860 30 93.3 31 ............................GT AAAAAAGAACATTTCCAGCAAAAATTGACGA 59921 30 93.3 30 ............................TT GCTGCCTGCAAACTTGTTTGGGGCTTTATG 59981 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 60041 30 93.3 30 ............................TT TAAAGCTAAATGAGGGTTAAACCTAAGAAA 60101 30 96.7 30 .......T...................... CGTGAACAATTGTTTTAGCTTTGAACATTA 60161 30 86.7 30 .............C...T..........GT TACTGGGTTGCGGAATATATTCGCAATTAT 60221 30 86.7 30 A......A.........T...........T TTTGATCTTTACTTATTCTCGCTTCAAACA 60281 30 66.7 0 .......A...T.....T..C...AGCGTT | ========== ====== ====== ====== ============================== =============================== ================== 122 30 95.3 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //