Array 1 70320-67907 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOMW010000007.1 Bifidobacterium longum strain MSK.11.1 NODE_7_length_147939_cov_392.058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 70319 36 100.0 28 .................................... TCGGACGGCTGGCCTCGTTTCTCCATCT 70255 36 100.0 28 .................................... AGAACGCCGGAAAGCTGTTCTAGCGGCC 70191 36 100.0 28 .................................... TCCGCAGCAGCCTGCCGCGCTTGAAGAT 70127 36 100.0 29 .................................... ACTACACGCGGTGGACGCCCGGCACGAAA 70062 36 100.0 28 .................................... ATGCACGCGATGGAGTCATGTCCAATGA 69998 36 100.0 28 .................................... AGAAAATGCCCGGTCTCGATCTGATACA 69934 36 97.2 28 .................................G.. TGCTTGAGCCTGGCCCAGCCGCCCGTGG 69870 36 100.0 28 .................................... TAGAGAATGAGATTAAGAATTGCTAAAG 69806 36 100.0 29 .................................... GGGCACAACGACCCCCGCGTAACACCAAT 69741 36 100.0 29 .................................... CCACGAAAAGAAGCCGGTAACGGCATTGC 69676 36 100.0 28 .................................... GAGGCCCGCGACCTGATTTCCAGCGGCG 69612 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 69548 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 69483 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 69419 36 97.2 28 ......A............................. CCGAGGCCGGTAGGGTTGCGTGTCTGGT 69355 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 69291 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 69227 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 69163 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 69099 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 69035 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 68971 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 68907 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 68842 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 68778 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 68714 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 68649 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 68585 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 68521 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 68457 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 68392 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 68327 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 68263 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 68198 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 68134 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 68070 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 68006 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 67942 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 38 36 99.5 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAACATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //