Array 1 127-497 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWN01000333.1 Corallococcus sp. AB045 NODE_4235832_cov_47.0354_ID_14740, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================= ================== 127 28 100.0 38 ............................ CGGGATCACCGCTTGGGGTCCCGCTCCATCCAAGCCGC 193 28 96.4 45 .A.......................... GGGTCCACTGCACTCGGGGGGGACACCGCCCCATCCGGGCCGCAG 266 28 96.4 39 C........................... CAGATCGCACGCTTCGGGACGGTGGCGCCACCGAGCCTC 333 28 100.0 38 ............................ CGGGATCACCGCTTGGGGTCCCGCTCCATCCAAACCGC 399 28 100.0 43 ............................ TTGGAGGACCGCGGCCTGGGAGCGGCCACCCCATTCGAGCCGA 470 28 67.9 0 ..GG......T.A..A.G.A..GC.... | ========== ====== ====== ====== ============================ ============================================= ================== 6 28 93.5 41 GGAAACCTGTCCGACTGTCCGACAGGTT # Left flank : TGCGCTCCCGTCCCGAGCCCCGCGGGGCACGGCACCGCTGACGCGAGCGGCCATCACGGCCACGAGTTCCAGGCTCCAGATGCCTGGGGCCACCGCAGCAAGGGGACCACTCCCCCCAGGCCGCAGG # Right flank : TGGAGCCGTGTCGGACCGACGGTGTACAGCTTGGAGGCCAGGGGGCTTAGATTGCCGGCCCCATGAACGTCCTCGTCACCGGGGCCACCGGCCTCATCGGCAATGCCATCGCGCAGCGGCTCGTGAAGCAGGGCGCCTCCGTCCGCGCGCTCGTGCGGGACCTGGCCCGCGCCTCGAAGCTGCTCCCCTCCACCGTGCAGCTCATCCAGGGGGACGTCACGTCGCCGGGCACCCTGCCCGCCGCGTTGCATGACGTGGAGCTCGTCTTCCACGCCGCGGGCATGCCGGAGCAGTGGCATCGGGACGACTCCATCTTCGACCGCGTGAACCGCCAGGGCAGCGTGAACGTCCTGTCCGCCGCGCACGCCGCGAAGGTGCGCCGCGTGGTCTACACGTCCACCATGGATGTCTTCGCCGCGCCCCGGGGCGGCGAGTTGACCGAAGCGAACATCGACCCGCACCCCAAGCCCACCGTCTACGAACGCTCCAAGCAGGACGCC # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAACCTGTCCGACTGTCCGACAGGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 3415-2685 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWN01000360.1 Corallococcus sp. AB045 NODE_4534680_cov_31.9859_ID_14800, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 3414 35 100.0 36 ................................... GCGGCAGGCCCCCCGCGCTGCCCCGGGGCAGCTGGA 3343 35 100.0 34 ................................... TCAGCCGGAAGCTCCTGTTCCATCCCGATGGCGG 3274 35 97.1 34 ......................A............ TCAGCCGGAAGCTCCTGTTCCATCCCGATGGCGG 3205 35 94.3 34 .GG................................ TCAGCCGAAAGCTCCTGTTCCATCTCGACGGCGG 3136 35 100.0 34 ................................... TCAGCCGAAAGCTCCTGTTCCATCTCGACGGCGG 3067 35 100.0 35 ................................... GTGACCGGGTCCTCGGCGCTGGCTCCTGGGCGCGG 2997 35 88.6 31 .....................C....TT.G..... AGGCGGAACCCGTGATGACTCCAATTGGCGG A [2967] 2930 34 88.6 36 CG.......C...................-..... TTGGTAGGGCTCCCGGGCTTTGGCTCCGGACTGCGG 2860 34 88.6 36 ....T....C...................G..-.. TTGGCGGGGCTCCCGGGCGCTGGCTCCGGACTGCTG 2790 34 91.4 35 ....T....C...................-..... TTGGCGGGGCTCCGGGCGCTGGCCGCGGACCTTGG 2721 35 77.1 0 G...T....C...T.....C......T..C..T.. | CC [2690] ========== ====== ====== ====== =================================== ==================================== ================== 11 35 93.2 35 AAACCTGTCGGACAGTCGGACAGGTTGGGAGGACC # Left flank : GTCGGCCCTGCCGAGGCCGGACGCGCTGTTCGCGCTCGGGCTGGATGGGCCCTGGTACGCGTCGGTGCACTCGGCCTCCGCGAAGCTGGCCCCGGACGGGGGCGCGATGGTGCACGTGGCGAAGTACCTGGGCGGCGCGGACACGGAGGCGAGCGAAGCGGCGCTGGAATCCGTGATGGACGCGCTCCAGCCGGGATGGCGCGCGAAGGTGGTGGCGCGCCGCTACCGGCCCTCGCTCACAGTCAGCGCCGGGTTGCCCCGGGCCGTGAACGGCGGGCTGACCGGACGCCCCACCGTGGAGGTCCCGCACGTGGGCGGACTGTTCCGGGTCGGCGACTGGGTGGGCGCGGAGGGCATGCTCGCGGACGCATCCCTGGCGAGCGCCGAGGCCGTGGCGCAAGCCCTGGTGCGACGCACCGAGACGTTCCAGCGCCACGCGGCGGGAACTTGAGGCCAATGGGCGTACAGGCCAGGAGCCCCTCCCCTGCGGCGCAGAGCAA # Right flank : GGGCCCGGAGGGTCTCGGTGTGGAGGTTCGGGGGCTTGGGGTACCAGGCGTTGCGGTGCTCCAGTGATGCTCCTGGATTCTTGGAACGTGAGGGCTTGAACGGGATGGATTCACAGGCGCGAGGAGCACTGGGACAGGCCGCACGCGAGCACGAGCGCTTCCTCTGGGGGCTCTGCTACCGGATGACCGGCGTGGCGGCGGACGCGGACGACCTGGTGCAGGACGTCTATGCGCGCGCGCTCGCGACGCCACCGGAGCGCCTGGACACCCTGCGCCCCTGGTTGACCCGTGTGGCGGTGAACCTGGCGCGAGACCACCTGCGCCGGCGCCGCCGCGAGGGCTACGTCGGTCCCTGGCTGCCTTCGCCGGTGGAGACGGGCGATGAGGAGGTCCTACCCGCCGTGGAGGCAAGGCTTCCGGGCGGTGGCTCGACGGAGGGGCGCTACGAACTGCTGGAGAGCGTGTCCTTCGCCTTCCTGCTGGCGCTGGAGGCCCTGTCA # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAACCTGTCGGACAGTCGGACAGGTTGGGAGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 129-283 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWN01000437.1 Corallococcus sp. AB045 NODE_637304_cov_30.7627_ID_15162, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =========================================== ================== 129 23 100.0 43 ....................... CTCGGGCTCACAGCAAGGGGACCACTCCCCCCAGGCCGCAGGG 195 23 100.0 43 ....................... GTTCGGGATCACCGCTTGGGGTCCCGCTCCATCCAAGCCGCGA 261 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= =========================================== ================== 3 23 100.0 44 AAACCTGTCCGACTGTCCGACAG # Left flank : TGCGCTCCCGTCCCGAGCCCCGCGGGGCACGGCACCGCTGACGCGAGCGGCCATCACGGCCACGAGTTCCAGGCTCCAGATGCCTGGGGCCACCGCAGCAAGGGGACCACGCCCCCCAGGCCGCAGGAA # Right flank : GTTGGGTCCACTGCACTCGGG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAACCTGTCCGACTGTCCGACAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [25.0-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 27489-27722 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWN01000108.1 Corallococcus sp. AB045 NODE_14632569_cov_41.3466_ID_14186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 27489 24 100.0 47 ........................ TCCGATGTCCAGGTGGAACAGGGCCCCTCCCAGCCACGGTCCTTCCA 27560 24 100.0 46 ........................ CGTGCTGCTCGGGCGGAACGGTAGCCCCAGCCAAAGGGCCTTCCAG 27630 24 95.8 45 ......T................. CGTGCCGCTCGGGCGGAGCTGCGGCCCCCTGCCGTGGCGCTCCGA 27699 24 95.8 0 ...........A............ | ========== ====== ====== ====== ======================== =============================================== ================== 4 24 97.9 46 ACCTGTCCGACTGTCGGACAGGTT # Left flank : TCCAGGCCGCGGACCTGGGCTACGGCCTGGATCACCGCCACGAGGGCAAGGGCCTCATGACCGAAGCCCTCCGCGCCTTCTGCGACTTCGCCTTCAGCGCCATGGGCCTGCACCGGCTCCAGGCCAGCCACCTGCCAGAGAACCTGCGCAGCGCCGCCGTCCTCCGCCGCCTCGGATTCATCCCCGAGGGCTACGCCCGCGACTTCCTCCTCATCAACGGCCAGTGGCGCGACCAGGTGCTCAATTCGCTCGTGGCCCCCGCCGAGCCCGGCCTCCGCAGCGGCCCCTGACTCTCCATCAATTTTGTCGATATTGGAGATACGGGGCTCAAAAAGCCGCCCATTCGAGGCTTAACCGTCAATATCGACAAAATTGATCAACGGTCAGTGGCGCAACCACGTGCTCACCTCACTCGTGGCCCCGCCGAATCCGGCCTCCACAGTCCCTGACCTGTTCCCCGAAATCCCCCCTACCCACCTCCCGCCTGAGGCTGAGTCAAA # Right flank : TTTCGCGATTCGCGCCGACAGGGTGGCCCCTCTGGGGCCTTACCTTCTCATCCAGTGGGACTGGCCTTGGTGTCCGAAGGCTTAGCGCGCCGGTGCCCGCACCTTCGGCTTCGACTCCGTCACCGCCGGCAGGTTCGCGTCGAACCAGTCCAGCGTGCGCAGCAGCCGGTCCTTCTGGTGCTCGGGCTTGCGCAGGCTGTGGCCCTCGTCCGCGTAGATGACCAACTGGGTCTTCACGCCCAGCGTCTTCAGCGCCTTGTGGAACTCGTAGCCCTGCGACGCGGGCACCTCCAGGTCCCTTTCACCATGCAGCACCAGCGTGGGCGCCTTCACCTGCTTCACCCCGTTGATGGGCGAGGAGCGCGTGTACACCTCCGGCTCGTCGTACACCGACGCTCCGAAGTACGGCAGCATCCATGAGTCGATGTGGTTCGTGCCGTAGTAGCTCTGCCAGTTCGCGATGCCCGCGCCCGCCACCGCCGCCTGGAAGCGCTGCGTCC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCTGTCCGACTGTCGGACAGGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //