Array 1 8645-7977 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEQX010000054.1 Ruminococcus sp. CLA-AA-H200 NODE_54_length_13713_cov_50.895039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================================================== ================== 8644 30 100.0 34 .............................. TTTCTTTGTTAGTGCTATAATAACATAAAACCGA 8580 30 96.7 35 ..............A............... TGACGAAGTTACCATTAAGTGTACGACGCGGCAAA 8515 30 100.0 36 .............................. TATTTGTCCGCACAGCAGACAAATAAACAGGGGCTT 8449 30 96.7 24 ................G............. GTTTGAATAATCAGAATCAATATG Deletion [8396] 8395 30 80.0 35 A......CCACT.................. CAGATGATCGACATCGAGCGGACAAGTATGATTCC 8330 30 80.0 34 .......C.CGCGA................ CGACAATCTCCGATTCTGACACAGACAATTTCTG A [8316] 8265 30 83.3 35 .......C.C.GCA................ CGACAGCCCAAAGTATAATATTAAGTTTAGGCACA G [8255] 8199 30 73.3 36 .......C.CGCGC......CA........ CACAAGTTCGTAAGTCTTTTTTCGCCCAAGCCTCAG A [8185] 8132 30 86.7 95 ...A...CCC.................... CTATATTGATGGTTGGGAGGGGAAACGGATCCGGATCCTTTTTCGTTTCACAGAATCTCAATGCATGTTTGCAACCGACATGATCCATGATATAT A [8122] 8006 29 76.7 0 C..C.-.....G....C..A.........G | C [7998] ========== ====== ====== ====== ============================== =============================================================================================== ================== 10 30 87.3 41 GTCGCACTTTTATGGGTGCGTGAATTGAAA # Left flank : AGCATATGGTGGAATTCGGCGTATACAAGATTATGGGGAGCGTCAATGTACAGCTTGCTGAAAAAACCGGATTTACACAGGAAGACGCGGAGCTGCTGAAAGAAGCCCTTATGACTCTGTTCGAAAACGATGCATCTTCGGCGCGTCCAGAGGGGAGTATGGACGTCTGCAGGATGTACTGGTGGCAGCATAAGGAGAAAACGCCGGCTTCCTCCAGCGGAAAAATTCAGAATGCTTTCCATGTCTTTGAGGCGGAAAACTCGAAAAGATTTGAGGATTACGAGATCTCCTGGAAACTGGATGGCTGTCCCGAACCTGATATTATTTAACTAAATGAATAGGTGCGAATGTGAAGTGAACAGAAATGTGCCAGGGCATTCGCACCGGTATTTATACCTGTAAAACAGAATAGCGATTGGATTATTAGAAAAATACCAGAAATATTAGCAATAATATACAAAATAACTGAACAAAACGATCTGATATTGTTATAATTTGCT # Right flank : AATATCAGCTTAGGGAACTTTACCCTTGCAAAAAAGAGCCGGAGAACCGACTCTTTTTCTTTGGTTATGCGGTACGGATAAGGCCGCCATTTGCGCTCTCAATTACGACTGTCCCATAATTGCTGCACTCTGGATGATCTGCGTTGTAGACAAAAGCAACACACTCACCGTTACGGTTTGGACGCTCAGCTGTCCAGTCTTCCTTGTCTTCAGAAACTGCAAGGATCGTATACATATCCCCAATGTTTGTCTGAGACCGGCATACAGCGTAGGGGAGTAGTCCCTGTGACTTTGCCTCGGCGGCGGCATAAGCCGCCTTGTCATTCAGGTCATAGAGGATACCACCAAACTCAGACATGAAAAGCTTTCCTCTTTTAAAGCCTTCGACAACAGTACCCATGACATTCAGTTTCTGAAGCCTCTTAAGCGCCTCTGCTTTAATCTCTTCATCCGATGCGATCCCGGATTCTGTAGGCTCATCTTCCGCAAGCTCATCCGCA # Questionable array : NO Score: 4.34 # Score Detail : 1:0, 2:0, 3:3, 4:0.36, 5:0, 6:0.25, 7:-0.63, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTTTTATGGGTGCGTGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //