Array 1 329-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJBU01000061.1 Psychrobacter sp. MES7-P7E contig110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 328 28 100.0 32 ............................ AAGAACCGTCAGAACAGTATTGAGATTGACGA 268 28 100.0 32 ............................ TTGAAATTTAAAACAGTATTGAAGTTAATGGA 208 28 100.0 32 ............................ AACCGTTCATTCCGCAAGCAAGTTGCTGACTA 148 28 100.0 32 ............................ ATGTAGCTGTCATCATTGAAGTAAACGCTCAT 88 28 100.0 32 ............................ ATCTAGCAGATCGCACTCACCAGTAATAAAGT 28 28 96.4 0 .A.......................... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 99.4 32 CTTCATCACCGCTCAGGTGACTTAGAAA # Left flank : | # Right flank : A # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCTCAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.30,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 33-300 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJBU01000060.1 Psychrobacter sp. MES7-P7E contig109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 33 28 100.0 32 ............................ AATACAAGAGCTGTATCATTACTCAAACAGTG 93 28 100.0 32 ............................ TGCAAATAGCTCGTCACTCACGTTAACGATGT 153 28 100.0 32 ............................ TGATGCTGAGCCAGTAGTCATTATCATGAGTG 213 28 100.0 32 ............................ ACTCTTCACCAAAAATCCTTCGTATTAGCTCT 273 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 CTTCATCACCGCTCAGGTGACTTAGAAA # Left flank : TAGATGGTGGCTTGCTAAAAGATAAGGCTATAC # Right flank : TGTTGCTGGTGAGTCAATATCAACTGAAACAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCTCAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50953-55543 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJBU01000097.1 Psychrobacter sp. MES7-P7E contig22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 50953 28 100.0 32 ............................ TTGTTAGGTTTCGTTTGTATCAAGTCACCATA 51013 28 100.0 32 ............................ TTACTTATATGCAAATTATAACTATAATTGCA 51073 28 100.0 32 ............................ ACCAGTACAAAAAGCCCATTCTATAGAGTGGG 51133 28 100.0 32 ............................ TTGTTCGTTGCCGATAGCGTAGCTAGTAACAA 51193 28 100.0 32 ............................ TGCGTTTGCCATTCCTGCGCTTGCAATAAGAG 51253 28 100.0 32 ............................ TGCTATTGCAACGTGTATCATGGCAGGGATCA 51313 28 100.0 32 ............................ AATCGCTTGTCAGCCGAACAAAGTATGATCGG 51373 28 100.0 32 ............................ TTTTAGTGTAACTTAATGTAACTCATATTACT 51433 28 100.0 32 ............................ AATGACGGCCGCAAAGACTTTAGGTAAAAACG 51493 28 100.0 32 ............................ CTTCTTTCAAGTCAAGCGAGTTTGACAGCGTA 51553 28 100.0 32 ............................ AGTGCAGCCATCAATTGCAGCAAACATATAGT 51613 28 100.0 32 ............................ ATCTTCAAGCGTGTCGATGATGACCAGCGCTC 51673 28 100.0 32 ............................ AATGGCAACAGTTTAGCCACCACGACACGCTG 51733 28 100.0 32 ............................ TTATACCGGCATTGCTGATATGTTCAAACTTG 51793 28 100.0 32 ............................ CTAGAAACAACAAAAGACTTATTACCACCAGC 51853 28 100.0 32 ............................ TGCTGCCTCAGCTATCCACTGCAATGAGTTAA 51913 28 100.0 32 ............................ GACAATCATAATATTTGCCGCGTGTTTTGGAT 51973 28 100.0 32 ............................ ACGTAGAAGTTGATAGTGACGAAGGTGTTTTC 52033 28 100.0 32 ............................ AATGAAACCAATATTATTCACATTGATATGCG 52093 28 100.0 32 ............................ CAGAAAAGAGCTGGATGCACATGCTAAGCAAT 52153 28 100.0 32 ............................ TTAATGGGCGGTTTTTTATTGCCTGTAGATAT 52213 28 100.0 32 ............................ GCCGCCCTGCATGGTGACGGTATAGTTTGAGC 52273 28 100.0 32 ............................ TTCTTATCGTGTCATCAACGCCGTTAAGCTCA 52333 28 100.0 32 ............................ CAACTAAGTATTGGTACTGTGCTCGCATCACT 52393 28 100.0 32 ............................ ACCATTGTCAGCGATGCTTTTAGCTGCATATC 52453 28 100.0 32 ............................ ATCTATCACCGCGCCTGACGCAGATTGTAAGC 52513 28 100.0 32 ............................ ATCAAATACCGACTGATCGAGCTGCTTTAGTT 52573 28 100.0 32 ............................ TTATCAAGCGGTATAAGTGGCGTAAAGCCGTA 52633 28 100.0 32 ............................ TTACTGTGTATAGTATAGAGTATTGTTGTCTT 52693 28 100.0 32 ............................ TACCGCCCGTCCAAATAAGCCCTGTCATTAAT 52753 28 100.0 32 ............................ ATGAATAAATCACGAATACTGAAAGCAGTTAT 52813 28 100.0 32 ............................ AATCATTCAAAAAAGGCTATGGCGTTTGGAAG 52873 28 100.0 32 ............................ TGCTCGTTACCAACTTCATCAATAATGGTGTA 52933 28 100.0 32 ............................ AAATTATGCAACAGCAGTGAATAATTATCCTA 52993 28 100.0 32 ............................ TATTGGCAATATATTTCTTCTTATAACGCTTA 53053 28 100.0 32 ............................ TTGTCGAATCACCAAGTATCAAAGGCGGTCTA 53113 28 100.0 32 ............................ TTGAATTAGCAACCACGTTTGTATATTTCTAC 53173 28 100.0 32 ............................ TTTATCGAGCAAGTACGTTGACTCTTTAGGCA 53233 28 100.0 32 ............................ TTTTGAAGTAGTTGAGCATAATGGTGGCCGTG 53293 28 100.0 32 ............................ ATTCGCCACGACTTAGCGCCTGATGTACTAAC 53353 28 100.0 32 ............................ TTGTACTGCAACAACTTTGATGCACTGTAAAA 53413 28 100.0 32 ............................ TTGCTGTGCTGCCGTCTTTGGACTATAGCCCG 53473 28 100.0 32 ............................ AGATAACAGACGTAAAAGTTAAGGCGATTATG 53533 28 100.0 32 ............................ AATGAGTGAAAACACAATGAATCAGGCTTTAA 53593 28 100.0 32 ............................ TTAAATTACCCATCAAGACACCATAATAACCG 53653 28 100.0 32 ............................ TCTTAGGTCAGGGTGCTGTAAGTGGCGGTACT 53713 28 100.0 32 ............................ TCGTAGCGTTGGCGTATTGTCTAGCGTATAGA 53773 28 100.0 32 ............................ TACTGTCTCGATGCTATCTACGCTGCCCTGCT 53833 28 100.0 32 ............................ AATTTTTCAAGCGCATTGGTAAAGCCTGAAAT 53893 28 100.0 32 ............................ TATGATTATTCGTGATGCTAATCCGCTAGAGA 53953 28 100.0 32 ............................ TGACAAATAAACAAGGCATTTGGAGTTAACGT 54013 28 100.0 32 ............................ ATATTTTGAGATAAGCGGAAACAAGTTTATTG 54073 28 100.0 32 ............................ GCAAGTCACTATCTTAGGTTTAGAAGTCACAG 54133 28 100.0 32 ............................ AAATGAAATACTTGGGTCAATAGACTGGCATA 54193 28 100.0 32 ............................ TAACCACCGCCCCAAGTACACAAAGAGCTATC 54253 28 100.0 33 ............................ CAGTCGGGTAGCTTTTTTATTGGTTTTAAAGAC 54314 28 100.0 32 ............................ ATCAACTGTACTTTAGTTTCAATCTCAATGTA 54374 28 100.0 32 ............................ TTCAGTTATAAGCCCATTATTAGTAAAGCCAG 54434 28 100.0 32 ............................ AACTGGAATAGGTGCGAAAGTATCTAGGTCAT 54494 28 100.0 33 ............................ GCAGGCGGTGATTGGCGATAAATCAAAAAACAT 54555 28 100.0 32 ............................ TATCTAAAATACTTGTAGGCAGCACTAGGACG 54615 28 100.0 33 ............................ CAGCAGAGATAAGGCCTTCAATGCTGTCAGTCA 54676 28 100.0 32 ............................ AGGGTAAAATTACAGGCAGTAAGTACGCGCAC 54736 28 100.0 32 ............................ TAAAATAAGCTATTTGTCCTTGTTTCTTGTTT 54796 28 100.0 32 ............................ ATTGTATGAAACATTTTCATGCTGATTAACGT 54856 28 100.0 32 ............................ TAATAGACGCATACGCTACGCTATTAGTGCCT 54916 28 100.0 32 ............................ GTGTATGTAATTTTTAAGCTGTTTGGCACTGG 54976 28 100.0 32 ............................ TTTTAGTGTAACTTAATGTAACTCATATTACT 55036 28 100.0 32 ............................ AGTGGCAGCAGGAGCAGCCAAACGGCAGCCAG 55096 28 100.0 32 ............................ TTACGTGATGATAACGGAAAGATAAAAAGTGG 55156 28 100.0 32 ............................ TCAATAAACTGTACGTCAAATCCTGCTGTTAT 55216 28 100.0 32 ............................ TATGATTGCTTAGTTAAAAAACTCATTAACAT 55276 28 100.0 32 ............................ TCATGAGTATCAGCATTGCCTTTAGTGATTTT 55336 28 100.0 32 ............................ TTTTAGTGTAACTTAATGTAACTCATATTACT 55396 28 100.0 32 ............................ CAAAACATTAGCCGCGGTTAAAGCTATGGATC 55456 28 100.0 32 ............................ TACAACGTTATTGCCACTTTTTATCTTTCCGT 55516 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 77 28 100.0 32 CTTCATCACCGCTCAGGTGACTTAGAAA # Left flank : ATCAAAGGCATCAAAGACGTGCCTATAGATAAAATAACGGGCTACGTGAGTGTACACCGCTATCGTTTTAAACCGATAGAGGTACAAGTAGAATCTCTAGCCAAAAAAATGGAGATTAGCAATGACGAGGCAATGGCGATAGTTGTTAAACGCAAAGCTGAATTAAAGCTGCCTTTTATCAGAATGTTTAGTGAAAGCAATAAAGCCCATTATCCATTGCAAATTTTACAACAACCTAGTAAACAGGACGTAACTGGTGGTTTTAATGTATACGGTATGAATGGCATGCGCGATAACGTTACTGTGCCGCAGTGGTAGTAGATAAAGTTAAAGGGTAATGATGAATTATCCTTTAATTGGGTATAAAAACCTTTTTTTTAATCTATTTAAAAACTTGCAATAAAATCAAACAGTTATGACAATATGAAAATTGGAGGGTAAATTAGGGTATTTTGCCCTCCGCGCCTTGTTATAACTGTCTTTTTTGAGGTATAGTTCCT # Right flank : TGCTATCTTTGCAGCAACTATCTTTTGAACCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCTCAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 33-2945 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJBU01000088.1 Psychrobacter sp. MES7-P7E contig44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================= ================== 33 28 100.0 32 ............................ TTGTATGCCATTGATATTGTTTGCTAGTGCAA 93 28 100.0 32 ............................ CTGTATATTCAAAGTTTCCGTCAATGACGTTT 153 28 100.0 32 ............................ TTATCAAGTAGATAAGTCTGCTCTTTAGGTAC 213 28 100.0 32 ............................ AGCTGAAGATACCGCCCCACTAACCGCAGTCA 273 28 100.0 32 ............................ TGATACTTGAGCATTGCCCTTAGCATCGACAT 333 28 100.0 32 ............................ CAAGGGAATCATGTGGCGTTATCGTAAAAAAA 393 28 100.0 32 ............................ ATCGGTGCGATAAGTCTTAGTATCTCCATTAA 453 28 100.0 32 ............................ ACTTTCATCATTACAAAGTCAGTACCTTTAGT 513 28 100.0 32 ............................ AATATCTATAGCACCGAGATTAGAGAAGCTAC 573 28 100.0 32 ............................ TATCAATAGTGGCACTGGGTTGTTTTGAGCCG 633 28 100.0 32 ............................ AGAGTTTAAAGGGACAGATGGAGCTAATTATT 693 28 100.0 32 ............................ TCTCAAAATCTGTAAATCTACTATTAAGCTCT 753 28 100.0 32 ............................ TCTCTTAGTTTTTCTACTTTCTCAATCTGCTC 813 28 100.0 32 ............................ TTACTACAACAGTGTGCGCCTGATATTGACCC 873 28 100.0 32 ............................ TTATTCATTAATTCAGTGGCTATAACTTTGGT 933 28 100.0 32 ............................ TTCGTGCATATTATCCTCTGGCTTATTAGACC 993 28 100.0 32 ............................ CTGACCATCACTGACCATCTGATCGCAATATT 1053 28 100.0 32 ............................ AATTCCTCAAAACTTTGCGGTATTTCTGTTGA 1113 28 100.0 32 ............................ ATCAATGGAATCATGACAGCTTGAGCAAGCGA 1173 28 100.0 32 ............................ CAAGCCCGAGAAAATGACGCTTGCTAAATATA 1233 28 100.0 32 ............................ TTTGCAATCGGTTTTGGTCATTAGATCGCTTT 1293 28 100.0 32 ............................ GTAAGCGTGCATGAGTTCCGTTATTGATATAT 1353 28 100.0 32 ............................ GCCACCAAGTTTCGTAGCGTCAAGCTCATACA 1413 28 100.0 32 ............................ AACCGACTACAGCGACGAGCTAGCAACTGAGA 1473 28 100.0 32 ............................ ATATGATGCTAGCGATACATGGCATCGAAATC 1533 28 100.0 32 ............................ GTAAGCACCAATCAGTCCATCAGGACTTGCAC 1593 28 100.0 32 ............................ TATTTGGCAAAGGTATTATAAAGAGGTCTGTA 1653 28 100.0 32 ............................ CTGTAAGCCATTAATATTATTTGCTAGTGCAA 1713 28 100.0 32 ............................ ACTTGTAGTGTTTCAGCGCCAACACTCTCTTG 1773 28 100.0 32 ............................ ACAGACGATGCGGCTAAGGACGTTTGCGGTGG 1833 28 100.0 32 ............................ CTGCACTCAACGACATACTACTAGCCATGACA 1893 28 100.0 32 ............................ ATTTCGTGAAAGTTGTCAGAGATAAAGCCGAC 1953 28 100.0 32 ............................ ACTAACAGTCGATACACGACCGCCGTTGGCAC 2013 28 100.0 32 ............................ ATATATTAAAGCTGTCAAACTGCTCGCCAACA 2073 28 100.0 32 ............................ TTATCTCGAATTTCAGTAACAGAGTTGGTAGC 2133 28 100.0 32 ............................ AATGCGCCACCACGCTTTACACTTCAATAACT 2193 28 100.0 32 ............................ AGTGACCAGCAAAATAGATGCAAAATAATTGT 2253 28 100.0 32 ............................ AACAGTCAAAGTGTCATAGTTGAGTCATAAAA 2313 28 100.0 32 ............................ AGCTGAAGATACCGCCCCACTAACCGCAGTTA 2373 28 100.0 32 ............................ TAATAGATCGTTTTATGACATATATTATATAA 2433 28 100.0 32 ............................ TTTTCAGCTGAATACTTGTGATGCTTGACTTA 2493 28 100.0 32 ............................ AATCACGCAGGGGCGGTGTTCCGTCGTGCTAC 2553 28 100.0 32 ............................ TGATGATGTTCACCTTGAGCTTTTTGAATTGC 2613 28 100.0 32 ............................ ATAACCACATGCTTCTCACGGTCTGTTGCGTG 2673 28 100.0 32 ............................ TCACCAACTAGCTGATACCAGTTACCTAAACG 2733 28 100.0 32 ............................ ACCCTGACGGCTCTACAAACCCAAGTATGCCA 2793 28 92.9 97 ..........................GC AGCGTTAAAAAATTGTACTGCAATTTTAGTTGTGCAAGGAAAATCCTTTAAATAGAATTTTCAGAAGTTATAATTCCAAACGCAATTCGGAAAAATG T [2817] 2919 27 89.3 0 GA..-....................... | ========== ====== ====== ====== ============================ ================================================================================================= ================== 48 28 99.6 33 CTTCATCACCGCTCAGGTGACTTAGAAA # Left flank : ATTTGAGTATGCAGAAAGCGAAAACGTATGGGC # Right flank : AGCTATAGGTGCTGAGTGAGAGACTGCCATTTACGGGTTTCATCACCTATAGGATGCTTAAAAATAGCGGGGTTTAAAGTAGTTGACAGATGTCATTGCCTAGAAATTCGATTATAGTAGATATCTATAACTATTATTTAAACAAGCTAAGGGGTTGAACCATGAAAGTACTAGGATTGTGTATTGCAGCAGGACTGGGCTTAAGCGCTTGTGCTATGACAGGTAATACAGACCAAAATAATAATGCCAATAGAGTCGTCACTCAATATCCTGTTGAAGCTGCCATACTAAACATCTACACCAAGCAACGCAGTGATAAGTTAATTGCCACGGTTGGGAATCAAAGTGTATCAGCAGAAATTCAAGTCACACCTAAAGGCAGTATGCGATTCAATAATAAAGCTGTACAAGGTGCCGAAGTAAACACTATCAATAAAGTGAATGATCGAATCACTGATCAGTCAGTCGCTATCAATTACTTTACCCTGAACCCACTCGTG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCTCAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //