Array 1 2677-1866 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGPU010000032.1 Clostridium senegalense strain AGRFS4 scaffold_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2676 30 100.0 36 .............................. TTGTATTTTATGAAGAACCTCTCTAGCTCTTTCCTT 2610 30 100.0 36 .............................. TATATTTCATTAATATTAGCTATTTCATTTTTTTTC 2544 30 100.0 34 .............................. TTTATGATCGAATAATTCCTTACGATGTAAATTT 2480 30 100.0 34 .............................. CAAGATTAGAAATATTAGACCCAGAAGCAGTAAA 2416 30 100.0 35 .............................. GAAATTAAAAGACAATTTATTTATTGAAGAAGGAA 2351 30 100.0 35 .............................. TCTTCTCTTATACCTTCATACTCACAAGCACCTGC 2286 30 100.0 35 .............................. TCTACAATAAGACATAACAGAGCAAGAGGATCTCA 2221 30 100.0 35 .............................. AGTTTAGAAACTTTAAAAGAGTTTTTAAAAACTAG 2156 30 100.0 35 .............................. TATGTAAAAACAGAGGTAGAAATATATAATGCTTG 2091 30 100.0 35 .............................. GTCTTTTTATCAACTATATTAGCTAGTTCATCTTC 2026 30 100.0 35 .............................. CAAGAAAACATTCTTAAAGATTTAATCACTACTTA 1961 30 100.0 36 .............................. ACCATAAATTATTCTTATATCTTCTCTTACTTCTCC 1895 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 13 30 100.0 35 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : TTTACTGTTATAGATGCTATGGAAGAAGCAATTAGCAAAGAAAATGTTAGACTTTGCTATGTTGAAGGTATTCTTAAAAATTGGAAAATTAACGGTAAAAAGATAATGCAAAGGCAATATAAAAATTCATCTTCTAACAACGATACATTTAATAATTTTCATCAAAGGAAATATGATTTTGATAAATTAGAAAAAGAACTTTTAGGTTATGATTTTTGTTAATGCACCAGCCATAAGATTGTAATTCTAAAACTTATCCGTTTATCAATGAGAAGTTTTAAATCTAAATCAAAACTTTTAAACGGACAATGATTAAAGATCTCTATGCCATAACAAGATGGATAGGTTCATTTGTGGCTAGTTATATAATAAAATAAACAAATCACTAGTACTTTTATTAAATATTTGCCATTACATGATTCTAAGAAAATGAACCTTCACTCCATCTGACGTTAAGATTTAATGGTAGATAACTACGCTAGATTCATGAAAGTTACAAA # Right flank : CATTGAAAAATAGCCATTCTTTATTTTTTATTATACATCTTAACCATTGATTTTGCTAGGTTTTATTGTTTTTTTACCAGTGATTTTTATTTTTTAAAGCAAACCAGCAAAACACCTTTTAAACTCAGTAATTTCAAAGCATTACAAGTTTTTAATGAATATTTTACTGGTAAAATTCATTATTTTATTTAAAATAACATTTTATTTAAAATAACATTTTATTTGTAAATTCCTCTTCAAAGGTGATTAGACCCTTATCTTCATTATTTTTTATTTTTTCAAACTCTTCTTTAAATACTAGTTTAGCTTTTTCTGTATCTTTATTTATTTTTGCTTCATAGGTAGCTAATGCTCTTGCTTTTGTTATAGCTTTGCTATTTTCTATAAAACTTTTGTTGTTATCATAATATTCTTTTGCTTTTTCTATATTATCTTCTATTACTGCATAATAAAAGAATATATCATGTGTGTAGGTAAACATTGTTCCTGTAAGTGGTGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 8078-8686 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGPU010000032.1 Clostridium senegalense strain AGRFS4 scaffold_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8078 30 100.0 36 .............................. GCATCATATCTAAAAAGATTATCTCCCCTATCTAAT 8144 30 100.0 35 .............................. ACATTATTATTTTCCATACTTGTTTACCCTCTTTC 8209 30 100.0 36 .............................. TTCATAGACTTTTCCACTATAGGTATGAAGTAACAT 8275 30 100.0 34 .............................. TAATAAAATATGTTAACAATATTGCTCCAATCCT 8339 30 100.0 37 .............................. ATTTAGTGTAGATGAATCAGGTGGAGACATCGGGACA 8406 30 100.0 38 .............................. CAATCTAAAATACAATTGCAAATCCTGCTATACTTAAT 8474 30 100.0 35 .............................. ATTGACCCATCCCATGAACCATATGCTCTAAATGG 8539 30 93.3 37 ...............GG............. CACAAAAACATTTGACATTCATCATAAAAGATGATAT 8606 30 83.3 21 ...A..TG.......G.............C ATTATTACGTTTATTATTAGA Deletion [8657] 8657 30 76.7 0 T......T...............AA..CTG | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 95.3 34 GTTGAACCTTAACATAAGATGTATTTAAAT # Left flank : CATACTATTAGGAGTGGCTTTTTTATTTGTTTTTATAACTAAAAAAGTTATGAAAAACATGAAAAATATGGCTTAGCTTTACTCACATGCTTGGAACCCTATATAATCTCCAACTTAAATTTATACATAAAATTTTTGTTATCAGTTGAGAAAAAAGACTAACAAAAAATTGTGCTTATATTTGTAATTTTTTAAATATATAGATTATATAGTAGTTAGATTGCATAATTAAAATTTGTAAAGAAGGAAAGTTATCCAAAGGGTTAGTCCCATCTAGAAGTTACTTTTTAATAAGTGAGAAAAATAAAAATATAAAATTAATGAATTTTACCAATGAAATATTCACTAAAAACTTATAATGCCTTGAAAATACTAAGTTTAAAAGGTATTTTACTTATTAACTTTAAAAAATAAAAATCACTGGTAAAAAAACAATAAAACCTAGTAAAATCAATAGTTTGGATGTATAATGGAAAATGAAGAATGGCTATTTTTCAATG # Right flank : GTTTTAAAAATGATGGCTTTTTAGCAGTATTTGTACAAAAAACAGAATAGTATATTAATTTAGTTTTAGAAGAATTATTGTTATAACTAAAAAAGATAGTTTAAATTTTACAAAATTTAAACTATCTTTTTTATATTAAAAATAAAAGCTGAAATTTAAATTAAAATTGTATTAGTAGGTTAGGTGGATATTTTAGCATTTTGGAAATATTAAACATGATAAATATTTACATTAAATCATTTATATGGTAATATATTTATAGGTATAAATCAATTATAACGTTAATTAAAGGGGAAATAAATTTGGGAGAAACAATTATTAAATTTATTGAATTTATTGAAAATAATAAACTTATGCTACTTACAGTAATGTTATTAATTTTTTCTATTTTTAATAGAAAAAAAGATATAACTTTAGTAAAAGAAGATAGAAAAGGATCTTTTCTTTTAGTTATATCTAATAACGAAAACATATAAAAGAGTTTACTTTTATATGTTTTG # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 3 19641-18494 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGPU010000032.1 Clostridium senegalense strain AGRFS4 scaffold_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 19640 30 90.0 35 .C..C........C................ TCTAACATTGTTACTATTTTCATTTTGATACCATT 19575 30 100.0 37 .............................. TGAGAGCATTAAGTGCAGACTTAACTGTAAAGTCAAC 19508 30 96.7 36 ..........................T... CGAATCAAAAATAGAGAATAAGCAAACTGGAAAAGC 19442 30 100.0 34 .............................. TGTTTAAGAGGTGGATTTATATGTTAACAAGAAA 19378 30 100.0 38 .............................. TACAACATACTTTCCTTCATCACGTGGAGAAGAAGTTA 19310 30 100.0 36 .............................. CCTTTCTCCTTGTCTTTGTAGTTCTGTTGTTTTTCC 19244 30 100.0 35 .............................. AACAGAAATGAAGAAGTTATTTCTATTCTATCAAA 19179 30 100.0 35 .............................. TATTTTATTAGGTTATAATTTAAAAAGTTTACGAG 19114 30 100.0 35 .............................. ATTTAACCCAGTACCAACTTTTACCCCCAAACCTT 19049 30 100.0 35 .............................. CCTTTAGATGCAATGGAGGACTTGAACTTAACATT 18984 30 100.0 34 .............................. ATGTAGTTCCTGAAATAGATGATGGAATTGAATC 18920 30 100.0 37 .............................. TTATTTGCAAACATATGTTTAATAAACGGGAATAAAC 18853 30 100.0 36 .............................. GGTTTCATGTTAGTAGAATAAAGGATGGGGTTTATA 18787 30 100.0 36 .............................. TTACAATTTATTGATTAACCTCCATATACTTTAAAT 18721 30 100.0 35 .............................. AGCAAGTTATAGAAATACTATGGAGTTAACGCAAA 18656 30 100.0 37 .............................. TAGACGAAGCTAATAATTCTATAAGTGAATATAACTT 18589 30 100.0 36 .............................. AAAAGATGTTTAATTTATATGAAAATGGTTATAGCA 18523 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 18 30 99.3 36 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : AAATACATAATTTTTATACTCTTTCTTAGGATGAAGTTCCTTTAAACTTTCATCCAATAACATTGCTTTATTTATATTTTTTCCAATTACATATCCACAGTCAGCAAAGTAAATATCTTTATTCAACATAACTGTAACCGTTAACTCTACAAAATTCAACACAACACCTCATTTTTTACTAATTTATGAATATTATACCATAAATGTGATGAATTTTATAATAAAAAAACCACTGATTAAACAGTGATTTAAATTATATTTTCTATTTAATTTTTAAATTTTAATTAGACTTTAATTTTATAAAGATACAATCATCATTTAAATTTGTTTAATATCATTAAAATATTTTTTATATATAATGTAGTATGGCATTTTAACTGTTTTGGATATCCACGTTTTCAAATGAATAAATTTAGAAGTCAACTTGAAAATTTATATATGTATTAAAATTTAATAACCTTTCTTAAATGTTTACAATTACATGGTGATAAGAAAATGAA # Right flank : CATTGAAAAATAGCCATTCTTCATTTTCATTATACACCTTAACCATTGATTTTGCTAGGTTTCATTGTTTTTTTACCAGTGATTTTTATTTTTTAAAGCAAACCAGCAAAACACCTTTTAAACTCAGTAATTTCAAAGTACTGCAAGTTTTTAATGAATATTTTGCTGGTAAAATTCATTTTAATTTCTTATCTTTACAACTAAATAATCAAATCTTCACCAGTGTTATTAAGTTGAATGCCTAATATTTCTTCTTCAAATACATTTTCGTTCATAAGTTTTATTATACAAATAAAATCTTCCTCTTTATTTATAACCCTATTTAAGTCTTTTCTTAAAGCTATTAGCTTTGATGGTGTTATTTCTCCTCTAAATACTGATTTTTGGAAATGAGATAGATATTTCTTGCATACTTTAAAAACTCTTTGTACTCGTTTCTCGTTAACATCATAAAAAACAAATGCATAGTTAAAATTAATGTTCTTACCCATTTTACATAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 4 30821-32173 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGPU010000032.1 Clostridium senegalense strain AGRFS4 scaffold_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 30821 30 100.0 38 .............................. ATTAATACAGATTCCTCAATAATTTTATTATTTTTTAT 30889 30 100.0 35 .............................. TTTAAAAAAGACTTGGTTTTTATTTCCAATCCAAT 30954 30 100.0 38 .............................. TAGGTATAATATAGGTATAAGAAATTCGGAAGGAAAAT 31022 30 100.0 36 .............................. TCCAAAAACCACTCTTTATTCTTATTTTGATTTATG 31088 30 100.0 37 .............................. GAATATAAAAAATATATTTCAGATTTAATAGATGAAA 31155 30 100.0 35 .............................. ATCAATAATAACAGAAGATAAAGAGCAGTTGGAAG 31220 30 100.0 37 .............................. TGCTTTTGCCTGCTGATACCATTTTGTCGCCTACTGC 31287 30 100.0 36 .............................. AAAGGATGGTGCAGTTATAAAGTTAGACTTGAACGA 31353 30 100.0 35 .............................. AAGAATTTGGAGACCCAAGAAAATTGGATATGCAT 31418 30 100.0 36 .............................. CTAGATATAGAAGAACAAGAAGTAGAAGGAAGTAAA 31484 30 100.0 37 .............................. TCAATTCTAAAATTAATTTCTATATTGCCTTTTCCAT 31551 30 100.0 37 .............................. ACAACCTTGCTTTTATATTTTGCATTATTCATTTTCA 31618 30 100.0 37 .............................. TAGAACAATTTAGACTTATTAGTTAATATTTTAATAA 31685 30 100.0 35 .............................. AAAGCTAGTTGGAGCTATGATGCAGAATGGAGTAA 31750 30 100.0 36 .............................. TACCAAAGAGATTGATTTGAGTCTTCGTTTAAATTT 31816 30 100.0 36 .............................. TCATCAACAACGACCACATTAACAGGATTATTTATA 31882 30 100.0 36 .............................. AGAGTAAATCTGAACTACATTTTTAGTGCAATATAT 31948 30 100.0 36 .............................. CCAGGATTAGCTACTATTGGGCCAGGTATTTCACAT 32014 30 100.0 34 .............................. GTATTACTAGACAAAGCTTTAATTTCACTTTCAT 32078 30 100.0 35 .............................. TGCCATTCCTCTGTTGTTAATTGTCTTTTTTCCTG 32143 30 100.0 0 .............................. | T [32166] ========== ====== ====== ====== ============================== ====================================== ================== 21 30 100.0 36 GTTGAACCTTAACATAAGATGTATTTAAAT # Left flank : CCATATATAGTTCCAAGGGCTTACTAATTATAATATACTCATAAGTGATATAGACAAAGGATTAAAAAGAGGAAAAGTAACAAAAATCACTTAATTGCAAGATTAATTAAATTTTGTTTGGAGGATGGTTAAAGTAATGTAATAATATTTCAACAATAAAATTATAATATTGATGAAATAATTTATAAATAACGTGAATTAAAAATCCAAACCTATTCTAATCATTGAAATAAAAGGCTTAGAGTGGGTTTTTATTGTGAATGAAATATATTTTACTTATAAAAGAATAGTGGTTTTGAATTGAAAAAGTATAAAAAATAATGAATTTTACCAGCAAAATATTCATTAAAAACTTGTAATGCCTTGAAAATACTAAGTTTGAAAGGTATTTTGCTTATTAATCTTAAAAAATAAAAATCACTGGTAAAAAAACAATAAAACCTAGTAAAATCAATAGTTTGGATGTATAATAAGAAATAAAGAATGGCTATTTTTCAAGG # Right flank : TTTTATTAACAAATAGAATATGCCTATCCTAAAGTGTTATATTTAATACTTAGGATAGGTTTTTATTTTAAAAAGATTTTAATATATGATGGATATTAAATGTATAATTAAAGCAGTAGAAAATGTTAATTTTTATATTTAAATAGAAAAATATAAAAATTTTATCAATAAATACCTAAAGTTACTTTATGCAGAAAGGGGTAAATTATGAAATATAGTATTACAGATTTAGCAGAAATTCTTGGATGTACTACAAGTGCTATTCACTATTTTGAGAAAGAGCATTTAATTGAAGTGGAAAAAGGAAAAAACGGTCATCGTTATTATAATGTTGTAGATGTATTTCGATTGCTTTCCTATACAAAGTATCGTTCAATGGAAATGCCTATGAAAACCATCATTACACAATTTGGTGGGAAGGAAAATAATTATAAGTTGATAGAAGAAAGAGAGACAATGTATCAATTAGAAGCTTTAAAAAAGGCTGAATATTATATGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 5 35701-36517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGPU010000032.1 Clostridium senegalense strain AGRFS4 scaffold_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 35701 30 100.0 36 .............................. AAACTTTTTTTCAATAGAACAATTGAGGAAGTTGAA 35767 30 100.0 35 .............................. TAGGAAGAAATAATTCACAATTATCATTTAGTTTA 35832 30 100.0 36 .............................. AACTAATAATAGTAACAATAAAATAAATAATGAAAA 35898 30 100.0 36 .............................. GAGATTGGGTCAGAAATTAAGATACAGATATTAGGG 35964 30 100.0 35 .............................. GGAAGTTCTCCTTTGTATGGGGTTTCTTCACTATC 36029 30 100.0 36 .............................. TCAATCAATCCTTCTTGAATTGATTTATAGATGTCT 36095 30 100.0 34 .............................. GTTTAATGAGCCATAAGGGGAATGATGGCAACAG 36159 30 100.0 35 .............................. GAAGACTATTACCTGCGAGTGCTTCAAGTTCTAGT 36224 30 100.0 36 .............................. GATGATAAATTTATATATGACACTAAAGGTGCAGAC 36290 30 96.7 36 ....................T......... ATGCTAGACTAGGCAAAGCCTAGTGTTTCCACGATA 36356 30 96.7 36 ................A............. TGCAATTTAAAATTGTTAATGTTATCATCAAAAATC 36422 30 96.7 34 .........C.................... TATAATACATAATCGTTTATCTTTACGCTTTGGA 36486 30 96.7 0 .........C.................... | AG [36510] ========== ====== ====== ====== ============================== ==================================== ================== 13 30 99.0 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : GGAGATGCTAATAAGGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAGATGTCTTTATGAAAACTAGATATGGATATATGTCCATATCTAGTTTTCATTTTTAAGGATTATTATTATAACTTTTGTTTTTTTATAATTATTATTCAAATAAAATTCTTGTTTGAATAATTTTTAGTGAATTTTTACACATGTTCTAACTATTGAAATAAAAATTCAAAGTAGGTTTTTATTGTGAATGAAATATATTTTACTTATAAAAGAATAGTAGTTTTGAATTGAAAAAGTATAAAAAATAATGAATTTTACCAGTAAAATATTCATTAAAAATTTGTAATGCCTTGAAAATACTAAGTTTGAAAGGTGTTTTGTTTATTAATTTTAAAAAATAAAAATCACTGGTAAAAAAACAATAAAACCTAGCAAAATCAATAGTTTGGATGTATAATGGAAAATAAAGAATAGCTATTTTTCAATG # Right flank : TATATTGAATTTTATTTATTTAGCATTTCTTTTTTATAAAAACTAATATTTTAGGTAAGAATAAACTCAGGATTATTGAATAGTGGATAGTTATAATAAGGAGTGAGTTTATGTCATTAATAACATTTGAAGATATAAAAAATAATAAAGAATTTAAAACTTACATAGAAATAGGTGATAGACACTTAGGTGTAAAAGGATATACAAAACACGATTTTGGGCATGTAATAAAAGTTGCAGAAACTGCAGGTAATATATTAGAGCATTTAGGATTTAGTAAGAGAGAAGTCGAACTTGCAAAGATTGCAGGATATATACATGATATTGGAAATATGGTAAATAGACAAGAGCATGCTCAAACAGGAGCATGTATTTGTTTTAATATCTTAACTAGATTAGGTATGAGTCCAGAAGAAATAGGTATTATAGTATCTTCAGTTGGAAATCATGATGAAGAAGTTGGAATTCCTATAAATCCAGTAGCTGCAGCATTAATATTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //