Array 1 228190-228482 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036524.1 [Clostridium] hylemonae DSM 15053 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 228190 31 100.0 33 ............................... GACATAGGGTACGTCCATAGTGATAAATATTAC 228254 31 100.0 36 ............................... ATCAAACCAGCCGTTGAAGATATGATACAGCCGCAG 228321 31 100.0 34 ............................... AACTCCGAACACTTCTACGCGAACCACTTTTTCG 228386 31 100.0 35 ............................... GTGTTTTTGAATATGGAGGAGATCACCACTCTTTG 228452 31 90.3 0 ....................A.....T...A | ========== ====== ====== ====== =============================== ==================================== ================== 5 31 98.1 35 TCGTTCCCCTTGTGGGAACGTGGATTGAAAC # Left flank : CAAGTTAGGCCTCAACTATGTATCCTGCTCACCATTCCGTGTGCCGATCGCAAGATTAGCGGCAGCACAGGCAGCTATCACAGCCAAGAATGCATAGTCAATAGAATAAGAATCATATTGAAAGCCGTCAGTTCTTTTTATTAAGGAGCTGGCGGCTTTTTTGTGGCAAAAATAATTAACTGTTCATTCTGTAATAATGGTATAATTGAGTAGATATCATTCAGAATTATGAAGGGGAGGGCTGTCTGGGTAATAAGTATTAAGACAGAGGCATAACGTATATGGGTTGATAGATGAGAGAAGTGCTGTATATGAGATTCCGAGTCTGTAGTGCGAATGTGAAGTGAACATAAAATTCCCGGGAGATTCGCACCAAAAAAGTTGCACAAAACAATCAGGCGTATTAGACTATAAGATAAATATGATTATATATCTAAAGAAATTCGTAGTATAGTACAAAAAGCTTTGTCTTTTTGTGCTGGAATTTAGATATATTTGCG # Right flank : ACTTTTAGCAGTCAACCACGCGTTAATGAATGACTGTTGTTCTCCTTGTGGGTGTCTGCTTCTCATTGTAGATGAAGATTCACGGCCTCCGGTGACAGTGACAGGCAAGGCGGAGGAGCAGATGATCCGTTATGAGGATCTACAGAAAATGGAGGGATAACAGGACATATGATAAGTGTATGTGCTCTCCATCCGTAAGGGTGGAGAGCTTTTTTCTACCAGCATTTTGGGAGGCTGTTTTATAAAAAATAAAGAAATTATTAGGATTTCCTAAAGAAGCGGGAATAAAGAGTGCAATTTTTCAGAAGTCTGCTATAATGTTCAGTAGGCTGTGATAAAGGAGAAATGGAATGGGAACCAGATGCAGAATAAAAAATCCAATACTGCCTAAATATGCCATATTTCCGCTGCTTGCCTGTGTGACGGTAAACTTTATGGCATACAACGGGACAGAAGTGCTGACCAGGTCGTGGAAACACTATGACCTGACACTTCCTTTT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGTTCCCCTTGTGGGAACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 2 2484637-2483738 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036524.1 [Clostridium] hylemonae DSM 15053 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================================================================================== ================== 2484636 33 100.0 33 ................................. TGACCCGGGAGGAAATGGACCAAGTTCTGGAAC 2484570 33 100.0 34 ................................. ATACCACCCCAGGCCTTCTTCCAATTGCCCGAAA 2484503 33 100.0 34 ................................. ATATTCCCCTGTATCGTCCAACAATGTGAATTTC 2484436 33 100.0 33 ................................. CTTTTAGCGCGCTCTGATAATCATTGTATTTAC 2484370 33 100.0 33 ................................. TTTGATTACGTTATAGCGTGCGATCTGAGTTTC 2484304 33 100.0 35 ................................. GGCACCTCAACCGCTATTTCTTCACGTTCCGCCTT 2484236 33 100.0 34 ................................. CCCACAAATTTCCGTAAACTTCTGAGGATCTCCC 2484169 33 100.0 34 ................................. ATACAATTTTAAAAAAGGGCGTGGGAAGAGCAAG 2484102 33 100.0 35 ................................. GCAACCGTATATAACTTGCTACATGTGGAAGCGGA 2484034 33 100.0 33 ................................. ATCATCGGGCATAGGAAAGACCTAGATTTTACT 2483968 33 100.0 34 ................................. GTTAAATATTTTACAGGTTTAAAAGGAAAAACTG 2483901 33 97.0 98 ......................C.......... TGGAACACCTGCAGTCTTGCTCCAAGACCGATGAGTTTCCCTCCACATGGAAGGAATTGAAACCATCTGCCGACAGCCTTTGTCTCTGAGCTCCAGCA 2483770 33 75.8 0 .C..T......T.C.....A.C.....C....C | ========== ====== ====== ====== ================================= ================================================================================================== ================== 13 33 97.9 39 GTCTCCTTCCGCATGGAAGGAGTGGATTGAAAT # Left flank : AGAGAAGACTGTCCACGAGATCGGGCGGAAACATAATGTGACCGTTGCCACGTCAGATGCGCTGGAGCAGGTGATTATCCTTGGGCAGGGCGGAAGAAGGCTGTCTGCGGAAGGACTTCGGGAAGAGGTAGAACTGGCGATGCAGGAGATGAGAAGCGAGCATCTTAAAGAGAGCAGAAGTACCCGAAGCTACCTTTTTGATAATCTGCCGGATGAACTGGCGGACTATGTGGAAGAGCTGCGGATGGGGGAAGACTCTTCTGATTAAAGGGTATGGGTCTGCTGAACAGGGGGAAGGGTTAAGTGTTGTGTAAGCCTCTTTTACTTTAGTGCGAATGTGAAGTGAACATATAATTGCCGGGGGATTCGCACCAGAGAACAGGCTGTTTTGTCAGCAGCGAGGCCTGAAAGATGTGAATTGTGCTGTTATTAATTTGTGAAATTGTGCAGTCTGTATAGATGTAATTGGGGTTTTAAGTTATAATATGTATAGAATTGCT # Right flank : AGCCGTCAGGCGGCAGATGTTTATTTTAATGCTCAGGTGGTTAAGAATAGAAGGCTGCCGGGGAATAAGTCTGAGAACAAAAGTCTTATTCCTTCGGCAGCCTTTACATATTATCTTATTTTGCAGCCTTGTCGGCAAAGTCGGTCGTTACGAGGTCGTCATATGGCGCCCGCTTATCAAGCTCATTGGCGTCTTCCAGTATATCCTGAAGAAGCTCAAAGCTTTTCTTTTCAAATACGAGATTGTCTTTCCATGTGTCCTGGTCATAGTATCTTGTCACGATAGTAGTGATAGTGTCCAGGTCTGTCTCTTTAAACTGAGGCGCGATGATGGAAGCAATTTCCTCAGGGGTGTGGGACTGTACATAGTCCATACCTTTCTGCAGTGCATTCGTGAAGCCCTGGATGATTTCCGGGTTTTTGTCGATATAGCTCTTCTTTGCGGAGAAAGCGGTGTACGGAACATAGCCGCTGTCGGTTCCGAGGGAAGCTACGACATAC # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:-0.44, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCTTCCGCATGGAAGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 3 2659718-2658610 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036524.1 [Clostridium] hylemonae DSM 15053 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 2659717 34 100.0 32 .................................. ATCATACTGCCTTCATAAATATTGCAGCCTGT 2659651 34 100.0 32 .................................. CAAGGATTACGACGGAAATAAACCTGTTATAA 2659585 34 100.0 32 .................................. TAATATCCCTTTCACTTAAATAAATTTTTTCC 2659519 34 100.0 32 .................................. TCAAAAATTGTGTTCCATTAAAACAAGTCATT 2659453 34 97.1 32 .................................C ATTCTCAAAATCATCTAAGTCATTAGTTGGAA 2659387 34 100.0 33 .................................. CCGGATCCACGTCCCATACACTCTCACAGTAGT 2659320 34 97.1 34 .................................G CATATTCACCCTGGTTCTTCGCGTAATTCCCTTG 2659252 34 97.1 33 .................................T TCTCAGAAGGTAGTGACCCCATTGAATTAACCG 2659185 34 100.0 32 .................................. TAATAAGCCAGCCTCACCCTCTCTTCACTGGT 2659119 34 100.0 35 .................................. ACTCATATGCATTGACTGACGCTAACTGTGCTCTT 2659050 34 100.0 35 .................................. CGAGATATGTAAGCTCAAATATCTGCTTTTCCTCT 2658981 34 100.0 33 .................................. ACTCCTTCAGACATGGATTCTTTCCAGCGTTCC 2658914 34 100.0 33 .................................. CAACCGGATTAGGAAAAAAGGAGCATCCGAGAC 2658847 34 97.1 35 .................................G AAGATACTATGACCGACAGCCCCACCTATGGAGCC 2658778 34 100.0 34 .................................. TCTGAAAGCATCACGTTACATATCCATAGAGGCT 2658710 34 100.0 33 .................................. TGACCTTTGTGTTTATCAAACTAGTGAGATATG 2658643 34 79.4 0 .......T....C...A..A.A.....A.....G | ========== ====== ====== ====== ================================== =================================== ================== 17 34 98.1 33 GTCTCTACCCATTTGGGTAGAGTGGATTGAAGCA # Left flank : GAAAGCGGCGATTAAGAAAAGTTGCAAAGCAATGTGTAAATTATGGACAGCGGGTGCAGAATTCCGTATTCGAGTGTAATCTTGATGCGGCGAAATATCGGCAGGTAAAGGCAATTCTTGAGGATATTGTCGATAAAAGTAAAGACAGCCTCCGATTTTATAATCTGGGAGATAAATATAAAAACAAGGTTGAACATATCGGGGCAAAGAAAAGCTTCGATGTGACAGATACTTTGATTTTTTAACTTATCAGGGAGTAAAACTTTTTGACCGCGTATAGGCATAAGTTGTGTGGCTGGCGGCGCAAAATCTGTTGAGAGAGTAACTATGGTGCGAAACGTATGTGAACATAAAAATGCCGGGAGATTCGCACCGAAATGTATTAGATATTTTTGATAAAAAAGTGAAAATGTAATAGAAAATATTATTTTACTACCAAATAGTATGCAATTGTGACAAGTATTCGGATAGTATGTTGAGGAATAATGTGCATAATTGCT # Right flank : CTCTAGCTAGAGCTGGTTGAGGCTTACCCATTGTCTCTTCCCATTTTTGTATGTGGCATTTTACGGGCCGAAAGGTTCTATCTGACCTGGGGATATACCGATATGGGCAGGGTGATCAATGGGTTAGCCGCTATCGTTCAGTACAACTTCAAACTGGATTTTTTTTCAAATAACCTGTCTCTTTTCTGCGGACGTAAATATAATCGTATAAAAGCATTTGATTGGAAAGGGAATCGTTTTCTTCTGTAGCCGGCTGCTGAAAGAAAAACCGCTGGAACAGAAATCCCCTCATGTTGATGAAACACCTGTCCAGGGTGCTTTTTGAGGAGGGAAGAAGAAAAGCTCCGGTCTGATGAATTATCTTTGGGATGGTAACTGCTCCATTCCAAACAATCTTGCAGAAAACGGTATCCGTCCATTTACCATAGGTCGTAAGAACTGGCAAATCAACCATTCAAAAAATGTGTCGCCCCCATACCTTTCAACAATAACAGAAGGGT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTACCCATTTGGGTAGAGTGGATTGAAGCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //