Array 1 68511-67222 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAMO010000007.1 Neisseria meningitidis strain 31819 NODE_7_length_92513_cov_43.624326, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 68510 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 68444 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 68378 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 68312 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 68246 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 68180 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 68114 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 68048 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 67982 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 67916 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 67850 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 67784 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 67718 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 67652 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 67586 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 67521 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 67455 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 67389 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 67323 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 67257 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //