Array 1 87948-89035 **** Predicted by CRISPRDetect 2.4 *** >NZ_LILC01000006.1 Priestia koreensis strain DSM 16467 scaffold12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 87948 32 100.0 34 ................................ TATTTACGGCTATTATGTCATTTATATCACTGGT 88014 32 100.0 34 ................................ TTTTTTGCTATCTTCTTTTTTACTATCATCCTTT 88080 32 100.0 33 ................................ CCGTCGCATTTACTTTTTTAGCTGCTACTGGAA 88145 32 96.9 33 ...............................G TGGTGTAAGTTGTCTTGTAAATTGTGAGACACG 88210 32 100.0 36 ................................ AATAGGAAGTGGTTTCCCATCTAACCCTAATCCCAT 88278 32 100.0 34 ................................ ACTATATTGACTTCCCTGTTAAAACAGAAGCAGG 88344 32 100.0 33 ................................ ACGTAATTTATCGGTAGCGTCACCAATATCATT 88409 32 100.0 34 ................................ TAGATATGGTTGCCTACGAAAAACACGTAGACTT 88475 32 100.0 33 ................................ CTCAAAGAACGTTATTATCACCCTTAGACTATG 88540 32 100.0 35 ................................ TTTTAAGGCTTGCATAATTGATTTATAAAGTAACA 88607 32 100.0 34 ................................ ATTTTATTTCTCAACCATTCGATCAAGATAATAA 88673 32 100.0 35 ................................ CTCGCATATGCTACTAAATTAACCGTTTCCGGGAA 88740 32 100.0 33 ................................ ACCTAATGTTCCCGGTGAACAACTTAGAGAAAC 88805 32 100.0 34 ................................ TATTATACTATCCCTAGCACGAGTTTCGTTAAAA 88871 32 100.0 35 ................................ ATGCTAGGCGTTAACTTCTGTGCAAATTTCGATAG 88938 32 100.0 34 ................................ ATTTTATTTCTCAACCATTCGATCAAGATAATAA 89004 32 93.8 0 .......................TT....... | ========== ====== ====== ====== ================================ ==================================== ================== 17 32 99.5 34 GTCGCATCCTATATGGATGCGTGGATTGAAAT # Left flank : AGATGAATATCCACCATTTTTATGGAAGTAGGTGAATAACTTGCTTGTGTTGATTACGTATGATGTTAGCGTAATATCAGAAGGTGGTCAAAGAAGATTACGAAAAGTAGCGAAAATTTGCCAAAAATATGGCCAAAGAGTTCAAAATTCTGTATTTGAATGCGTAATAAATACTACTCAGTTTGCACAATTACAAATGGAGTTATTAGCTAGTATAGATGAGGATTGTGATAGTTTGAGATTTTATCGTTTAGGTGATAATTATAAAGCCAAAGTTCAACACATTGGAGTAAACAATGCAGTAGATATAGAAGGTCCCTTGTTGTTTTAGTGCGAATGGAAGGTAAACATAAAAATACAGGGACATTCGCACCTTGTTATGATCAGTTCAAACATCTTTTTGATGCTTATTTGCATAGTTTCATCTGCCTTTATTACTAAAAACAAGTCGTACACCTCTATTTTTTGTGGTTTTTAGCCTGAAATTGGCTAAATTCGCA # Right flank : TGCTTCACGCTTTTTCTATTATGTAAAAGGGTAGTATGCAAAGAAGATTCAGGAAAAGCCATTTTAATTGCTAATAAGAAGGTTACAAACACTAAGAAAGATCTAAACTATACTAAAGAATTCAAATTAGAATTGTTCAGTAGTTCAGATCTTTTTGTGAATATGTTACAAATCTTTTCTTTTTTTACCCATATTCTTCGATGCCTCATGCGCCCGTTCTTTATCCGAGTTCGTATACAGTACTGCGGTATTCATCGAGCTATGTCCCAATTGGTTCATGACTAATACTAAATCACCCGTTTCCTCGGCTAGCTGCGTAGCATAAGTATGACGCAATTTATGAGGAGAGAGGGATTTGTTCGATTGAAACGCCTTGCTGTATTTCTTCACCATTTGTTGAATGGATCTTACAGACAAAGGGGAAGCATGACCTTCATAGCGCGTAACAAACAAATAACTATCTTCTTCTTTTTTTACTCGGTATTTTCGCTCTCGGATGG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTATATGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6011-6311 **** Predicted by CRISPRDetect 2.4 *** >NZ_LILC01000033.1 Priestia koreensis strain DSM 16467 scaffold23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 6011 37 97.3 29 ....................................T TATCACTTTATGAGAAATTTGGGGCTTGA 6077 37 100.0 29 ..................................... TACAAATGGAGGACACAAAAATTAGATTT 6143 37 100.0 30 ..................................... GGAGTAGGCGTAGGACTCATCGTAGGTGGG 6210 37 100.0 29 ..................................... CAAAGTAAAAATAGTCTCCATTCATTACG 6276 36 75.7 0 ...................-..C..CA..AA.A..TT | ========== ====== ====== ====== ===================================== ============================== ================== 5 37 94.6 30 ATCATAATACAGCAATGGCTTTAATGGAACTATGACA # Left flank : AGAAAATATTACAAAGATTGTATTTAAATTTGCTGAAGAAGGTGAGGAAGATCATTGTTTCATCGAAACAGAAGAACTGAAAAAGATCTTCCTGCTCTGGGACGAAGCCATTGAAAAGAAGTATGGGGAAAGTGACTAATATCGTTAAAATGGAACAAGTTTAACGTACAGATGATAGATTTATAGTAATGCTGGAGGATGTTCGCATGATAGTATGCGAACATCCTTTTTTATAGGTCTGCTTTAGATTTTGCATGGTCATAGCACGACCGGGAGAATAAATTCAAAATAATAAGAAGGTTAATTTCAAAGTTTTTTGGTTATACTAGATAGTTTTGTGTATAAACAAATGCAAATATGGACAGACTAAAAATAACAAGAAAATCATCACAGAATTTCAAAAAAAGACGTGGAAGGTCCTTAATTTATGCTTTTTAATACCATTTTTAAAAATCAAAAAAGCCTTCTAACGTTGTCGTTAAAGGCTTTTTTGATGATCG # Right flank : TTTCTTTTGTACACTATGATGTTTCAAAATCTGTATGCCTACTGGTTTTTCTTATTAGTATACGCCTGTTCAAACAACGCCTCCTTCATACTTTCAACGACTTCCTCATATTCTTCCTTCGATTCAATCGGCTGCACGGCCACTAACTGGTCGTTTTCTTCAATTGCTTCTACAATCGCTAGTTCACGCATTTCTTCGTTTTCAACGGTTTCTAAGGCAAGAAACTGTTTATCTTTTACAGAGATTTTCACTTGTAAGTAGCAATCTATTTTCTTTCCAGGACGCTTTGGATCTTCGAGCGTAATGATTTGTTTAGAGGAAAAGAGCGGTTTTGCATGATCTTGTTCTTTTCTTATGCGGAATTCGTCTAAATCAACAACATGATGAATGGATGATGATTCCATTAAAAGCATCTCCTTCATATGAATGATTTTTACTGGCCATTTTGATGGTTGGTATCCAAAATATGGTTTGTTGGTTTTTATATTACCATCTCGCTA # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATAATACAGCAATGGCTTTAATGGAACTATGACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //