Array 1 1265450-1260982 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFOT01000009.1 Delftia sp. HK171 Ga0310714_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1265449 28 100.0 32 ............................ CATGGCGAGCTCAGCTTCCGGGAAGTGGTCGC 1265389 28 100.0 33 ............................ TGAGGCTCCTGCACAGAAAGAAGACCCTTGGGC 1265328 28 100.0 32 ............................ TGAGGCTCCTGCACAGAAAGAAGACCCTTGGG 1265268 28 100.0 32 ............................ AGTCTGCTTCAACAGGTCGGAAAACATGCGTG 1265208 28 100.0 32 ............................ TCAGATGATTGAGCTTGCTTCTGGGGGGCTGC 1265148 28 100.0 32 ............................ GTCGGCGCGGGCAAACCTCCACCACACGTTTT 1265088 28 100.0 32 ............................ TGCGCGACCGCTCGGGCAACCGGCGGTTCTGG 1265028 28 100.0 31 ............................ TAGGCAGCGGCAGACCATTGCGGGTGTACTC 1264969 28 100.0 32 ............................ TTGTTGCGCAGCACACGCTGGCGCTGGGAAGC 1264909 28 100.0 32 ............................ GGGTAGTGGAGGCGCCCGCCGACGCGCGAGGG 1264849 28 100.0 32 ............................ TACCTCAACGCTCAGGTGGGAAATCTGGATGA 1264789 28 100.0 32 ............................ CTATGCAAACCGCAGAACACCACCGCGAACAG 1264729 28 100.0 32 ............................ GCCTGCGGGCGCTTGCGCGGCATCAGGCTGTG 1264669 28 100.0 32 ............................ TCGCAGAAGGCCAGCGTCTCGGCCAGAGCGTG 1264609 28 100.0 32 ............................ TGCTCGACAGCCAGACGCGATGCCTGGGCTTG 1264549 28 100.0 33 ............................ GTTCACCAGCGAGTCGTCGCTGGCTTCCAGGGA 1264488 28 100.0 32 ............................ TGCAGTCGTATCAGCTCGCTGGCGGCGGCCTC 1264428 28 100.0 32 ............................ AGGACAAACAGGCATCGCAGCGCCGCCTGATG 1264368 28 100.0 32 ............................ AACCTGCGGCCCCAAGCCCAGCAATACGCAAA 1264308 28 100.0 32 ............................ GCCAGTGAAAGCCCATGCGCATACGCACGCGA 1264248 28 100.0 32 ............................ GACTGAAAAGGCCCGTCCGGTCTTTGCTGGCC 1264188 28 100.0 32 ............................ TGCTGCCCGATGGCGCCTGCCTCGCCATGCAC 1264128 28 100.0 32 ............................ TCTTTCGATTCGAGCATCTTGCGCACGGAGTT 1264068 28 100.0 32 ............................ AAACAACAACGTTCCCGAGCCTCCTATGTCGT 1264008 28 100.0 32 ............................ AAATCCATGTCCAAGAAACACGCCCGCCTATC 1263948 28 100.0 32 ............................ GTTCGCCTGCGCCGTACTTGCTGCTCGGCATC 1263888 28 100.0 32 ............................ TGGTACGTCTGGACGGGCGTGTACTGGCGCAC 1263828 28 100.0 32 ............................ GTCGCAATGCCGTCTTTGATGTTCTGCGTTGA 1263768 28 100.0 32 ............................ TGCTGGACCAGATCGTGGCCTTGCTGCGCGCC 1263708 28 100.0 32 ............................ TGCAGGATCGCCAGACCTGCCGGCAAATCCGG 1263648 28 100.0 32 ............................ GTCCCCGCGTGCTGCGGACGGCCACATGGGCA 1263588 28 100.0 32 ............................ CAGCGCGGCAATGGCCTGGGACTCGCTGACTT 1263528 28 100.0 32 ............................ TGGTGGAACTGGCGCCCTGACGAAGCGAGTGA 1263468 28 100.0 32 ............................ AACCAGCTCTCCGAAATGGACTTCGATGCCCA 1263408 28 100.0 32 ............................ AAGCGGGCCGAGTGGATCAACAAAGGAGTGGG 1263348 28 100.0 32 ............................ TGCGCGCGCCGCCGATCTGGGAGCCGCAGTTC 1263288 28 100.0 32 ............................ CTGGAGGCTTGCATTGCGGAGGCCGTGGCTGC 1263228 28 100.0 32 ............................ ATCCACGGCACCATCATGAATCCCCACTCCAG 1263168 28 100.0 32 ............................ CCGCCCTCGTCGCCCAGCAACTGCTTTTCGTC 1263108 28 100.0 32 ............................ TGCAGGCCTGCTTTGATGGCCTTGGTCTTCGT 1263048 28 100.0 32 ............................ ATCCGCTCAACTGCTCACATCGGGCCGGTCGA 1262988 28 100.0 32 ............................ GCAGCGAGAAGGCCATGCTGTCCCAGCGCCTG 1262928 28 100.0 32 ............................ TGGTCCACCGCGCTACCTGAAGCAGACCCCAT 1262868 28 100.0 32 ............................ AGAACGCTCAGGGATCACCCATGGAGGCCGCC 1262808 28 100.0 32 ............................ ATCGGGGACGGGCCGGCGCGCGTCTGGGATTG 1262748 28 100.0 32 ............................ AGAACGGATGAGCGATGAGGCAAAGCATCGAC 1262688 28 100.0 32 ............................ AATTAGCGCGGCCCGAGAGGTGGATCTGTGAG 1262628 28 100.0 32 ............................ TTGAGGCAGCTCCAGCTGCCGTTATCAAAAAC 1262568 28 100.0 32 ............................ TTGGCCTGGACCTGGGCGCTGTATGCCTGGAC 1262508 28 100.0 32 ............................ CTCCGACGAAGGAAGTATGGGTGTGCTTCCCT 1262448 28 100.0 32 ............................ CAGTCGATGGGGTTCATGACCACCCCCGTGGA 1262388 28 100.0 32 ............................ AGATCGTGACCGCGATTTTGGCGCTCCTGGGC 1262328 28 100.0 32 ............................ AATGTAAGTCGGGAGAGATCCGCGTTAATGGT 1262268 28 100.0 32 ............................ TGGTGGCGCTTGGCCTGCTTGGTGGCGTGATA 1262208 28 100.0 32 ............................ GAGATGGCGTTGGCCGCCACGTTGGGCATGCC 1262148 28 100.0 32 ............................ TGACATACGTGTGGCAGTGCACGCCGCTGCCC 1262088 28 100.0 32 ............................ AGCGGGAATGTGCCGGGTTCAACTGGCCGCCA 1262028 28 100.0 32 ............................ AAGCAGGCCCTGAGCGACCTGACGTACCGGAA 1261968 28 100.0 32 ............................ TGCGGGACCAAGCCATTTGGGGCCAGGGCGAG 1261908 28 100.0 32 ............................ GCCAACTTGGATGGACTGGTTGATCGTCTTGG 1261848 28 100.0 32 ............................ TGGCCGCATCTGGCGGCCGTGGCCCGTGGACC 1261788 28 100.0 32 ............................ GTCGCCTATTTCACGCCTGATCCCGAAGTTGC 1261728 28 100.0 32 ............................ AAGTCGCTGAACGCATCCTGAGATGCGGGCTC 1261668 28 100.0 32 ............................ TCAATCTCAGGCACGCCAAACCATTCCGGCAT 1261608 28 100.0 32 ............................ TTGAGCCCGCGCAGATCAACGTGGCCGGTCTG 1261548 28 100.0 32 ............................ TGAGCAGCGCGACTGCGGCAAGCCCACGCGCC 1261488 28 100.0 32 ............................ AAATATGGTGCCGTTATTCGTGATCGTGATCT 1261428 28 100.0 31 ............................ ATGACGCGCGAGCACCCCAACACCACGAGCT 1261369 28 96.4 32 ............A............... TTTGGTCTTTCCCCTGATGTCGTACAGGGCAC 1261309 28 96.4 32 ............A............... AATCCAGGTCCTGGGTATCCAGGATCAGGGCC 1261249 28 100.0 32 ............................ GCGCCCCACTGGGCACAAGGAGAGCTGACATG 1261189 28 100.0 32 ............................ AGAGATCACGGCGAGCTTGTTGCCAGGATAGT 1261129 28 100.0 32 ............................ AGACCAACCTCGAATTCCTTGGCGGTCGAGCA 1261069 28 96.4 32 .................G.......... ACTGGAAAGCCCACGGCAGCGACAAGTACCCG 1261009 28 92.9 0 ............A........C...... | ========== ====== ====== ====== ============================ ================================= ================== 75 28 99.8 32 GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Left flank : CCGCGCTGCGCGGCCTGATGGAACAGCCCTGGCTGCAGGGCATGCGCGATCACGTGCACTGCACGCCGCCAGCTTTGGTGCCAGAGGGCGCCGTGCCCTACCTGGTGCAGCGCCGGCAGTTCAAGACCAGCCCCGACCGCCTGCGCCGCCGCCGCATGCGGCGCAAGGGAGAAACCGCTGAACAGGCCGCGGCCGCCATCCCCGACAGCGTGGAGCGCACCCCGGACCTGCCCTACGTTCAACTGCGCAGCGCCAGCACCGGCCAGCCGTTTTGCCTGTTCGTGGAGCAGAAAGCGGTGCAGGGAACGGCGGGCCAGGAAGGCTTCAACACCTACGGGCTGAGCCTGGGAACTGCTGTTCCCTGGTTCTGACCCTTTTTCTGGAGGCCTGAAGACAGCCTTGTAAATCAACAGCTTGGCAGATACCCCGGAATTTGGGGTGTTTGCCTGCTGGAGGTGAAAGCTCTTTCAAAATCAATGGATTGGGGAATTTTTTGCCTA # Right flank : GCTTGCGGATGCGACAGAGACTTCAGCCCTCCGGGCCATGCTCCGCGTATTCCACAAAGGACGGTGCTTCATCAAACAGTTGCAGGAGCAGTTTCAGGCGCCGGGCGTAGAGACTATGTGGACGATTGAAGGCCTGGGCGGCCAGGGCGATGGCTGCGCGGGCGAGATACCACTCGTTGTCGAATTCGCTGGCGTCCTCGAATACCTTGTGCCGAATTTGCCGGATGTGATTCAGCGCCAGGTCTGCGGCCAGGTCCACCTCTACATCCGCGTCATGCCAATCCATGTCGGCGCAGCGTGTTTCGATCAGGGCAACCAGCCCCATCTCTGCGCGGGCAATGGACAGGGCGATCATTTGCTGCATGGTGGGCCAGGCAGCGGTGTCCATCGTGCAGGGCTTGTTCGTTGAGTGCCGTGACGCAGTCATATCGATTCCTTTGTCGTCGCTTCAATGACTCGGGCTTTCTATGCACGATCTATGCACTCAATATTCTATGCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //