Array 1 1059386-1062014 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS981518.1 Clostridium sporogenes ATCC 15579 Scfld_02_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 1059386 29 100.0 36 ............................. ATCTCTTACATCAATATAAGTAGGCATGTGAAGCCC 1059451 29 100.0 37 ............................. AAGCCAACAAAAGTGGCTATTGGGGTTTGGGATAAGA 1059517 29 100.0 37 ............................. TAGATGATTTTGGGAACATATCTTTTTTTATGCATTC 1059583 29 100.0 37 ............................. ATTACCACATACTTTACTCATTTAATCACCTCTATTT 1059649 29 100.0 41 ............................. CCATCTGTAAATAATAAAACTATGTTAGTTTATATTAACTT 1059716 27 93.1 36 --........................... CAATTCTTCAGCAGCTATAGAGTCATAAACTTTACA 1059781 29 100.0 40 ............................. CCCCGATACAGTTGGGGCGGGGAATTTATTAGGTTTGAAA 1059850 29 100.0 72 ............................. TATCTTGTACAATCTATAAAATGGTTGTTCTTATCTGTTTATAAATTGCTTTTTAACATGCTCTTTTGGAGT 1059951 29 100.0 38 ............................. CCCCTAGTGTAACTATTACACCACCCCTAGTGTAGATT 1060018 29 100.0 36 ............................. TTAGATTTAACTAAACTATCAATTATCTCAGCTTCA 1060083 29 100.0 38 ............................. TTACATTTTCTTTATATATTTTATATTTCTATATATTC 1060150 29 100.0 37 ............................. TCTATCTTTAATGATATTATATCATTCATATTAGCCA 1060216 29 100.0 37 ............................. TGTTGATTACCACCAACTTTTATTACATCAGCATTCC 1060282 29 100.0 37 ............................. TTACTTTATTTTCTCTTTTATCACATTAATATCTTCT 1060348 29 100.0 36 ............................. TTATATAAATATATTTATTGTGAAATCTTCCATTGC 1060413 29 100.0 37 ............................. AATACTTTAATAAGTATCTCTCTAACATCTGCTATTT 1060479 29 100.0 36 ............................. TCATAGAAGGCTACGGCTGCATTTGGGCTAGCATGA 1060544 29 100.0 36 ............................. ATATATAAATATTCTAATATTTTTTCATGCTTATTA 1060609 29 100.0 37 ............................. TTATCTATTGCGGTACTTCTTGCTGTGTCATCTGCTA 1060675 29 100.0 36 ............................. ATGATTTAACTGTTACAAGAGGATTTGGTGGAACAA 1060740 29 100.0 36 ............................. ATTATTGAAACACATTTTTCTTTATTCATAATTAAA 1060805 29 100.0 37 ............................. TACTCTACCAGACTTTTTATAGTCTACACCTTCTATT 1060871 29 100.0 36 ............................. TGGAACATTTCACAATTACTATTGATGCAGTACAAT 1060936 29 100.0 37 ............................. CTATCTTCATATGCTAATACTTTTAAATGTTCTAGAT 1061002 29 100.0 36 ............................. AAATCAGAATACATTCTTTTATCACTTTCAGATATT 1061067 29 100.0 37 ............................. TAAACTTAGTTTTAGCGTGGAATCCATTTTGATTCAG 1061133 29 100.0 37 ............................. TTAGAATGAATGGGTTTAGATATACTATAAAAGAAAA 1061199 29 100.0 37 ............................. GAACAAATAAGAGATAAATTAGGAACTCTTATAGGTA 1061265 29 100.0 37 ............................. GGGGAAATTAATATGAATGCATCAAAGGTTAAGGCTA 1061331 29 100.0 36 ............................. AATGAAACAGCATGGAAAAATGGTACAGGTGGAATT 1061396 29 100.0 35 ............................. ATAGTATCTATAAATTTAATTGTTACTGTATAATT 1061460 29 100.0 38 ............................. TAGGGTGTACTTATTTTCTTACTAGAATCTTCCTGTTG 1061527 29 96.6 36 .........................G... AGTGATGCGTTTTATGTTGTTTATAAATCAACCATT 1061592 29 100.0 37 ............................. GATTATGTAGAAGCTTATAATTGGGGTAAAGTTCCTT 1061658 29 100.0 37 ............................. TTATTTTTTCACCTCTCTATTTAGTGACATGTTTTGA 1061724 29 100.0 36 ............................. AAAGTCAATTCTGCTGAATTGTATGGAGATGATCAG 1061789 29 100.0 36 ............................. GCATTAGCCATTAATCCAAGAGCAAAAGCAGTCTCT 1061854 29 100.0 37 ............................. ATAGGTATATATCTAGGTACTTTTATACCTATAGTGT 1061920 29 89.7 37 .............A......G..A..... CATGTTTCATCTATCATTAAAGCATGCTAAACAATGG 1061986 29 82.8 0 A..C.............A.GA........ | ========== ====== ====== ====== ============================= ======================================================================== ================== 40 29 99.1 38 CTTTTATATTAACTATGTGATATGTAAAT # Left flank : AGGTGATGCTATATATAAACCATTAAAGGCTTGGTGGTGATAATTTATGTTTGTTATATTGACATATGATATAGAAGAAAAGAGAATTAATAGAGTTAGAAAAATGCTAAAAAAATACTTAGTTTGGACTCAAAATTCTGTGTTTGAGGGAGAAATAACAGAAGGAAAGCTACATAAATGCCTTTCTGATGTTAATAAATTAATTGACAAGAAGTTTGATTCAGTATATGTTTATAGAGTAAAAAATTCTAAAAATATAAAAAAGGATGTAGTTGGAATAGAAAAGAGTTTTGATGAATTATTTTTGTAATTAGTTTTGCATTAAACCTAAATTTAAATTAATTAAGGTTAAACTATTGAAATTACTAGCTTTCTTGACAATAAAAAATAAATACTAAAAACGCTACTGAAGGTTTACTGCAAAATGTGGAAAATATGATAGATTAAGCATTGCTATAAATACAGTAATGGCGGTGGTTACAGGCTTTTTGAATTTTAGG # Right flank : TCAATATGCTGTGAAGTCTTTTTTTGTTATACCAAGATTCTATATACTCAAATATTGAGAACCTAGCGGTATCAAAATCATAATATGTAGCTAAATTTACTTCTTCCTTCTTTAGTGAAGCGAGGAAGGGTTCAATGTAGGTATTATCATAAGGACAATTCTTACCGCTGAAAAGGTGAATTATATTAATTCCTTTAAATATGCTTAACTGTTATCAAGCTTAATTTAAGAGTTTTGGAAAGATTTATGCTAGATTGCTGTAAAATTAATAAAGGTAGAAAGAAGTCTGCCTTGATTTTATCTGCTTCTATAAGTTTGTATATTTATCCTATGAAGGATTTTAAAATTTATTATAGAATACTTAGTGTAGTTAATGAATGAAATTATACATAATCTAATAAATTTTTTCCTAAATAAAAAATAGTTATTTATTTAGGAAAATAAACAGGGGGTTATACTAATGAAGATAATAGTTATTGGACCTAGGGGAAAAATGGGGA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //