Array 1 41086-39121 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOB01000015.1 Desulfurobacterium atlanticum strain DSM 15668, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 41085 30 100.0 38 .............................. TATCGTTGAGGCAGCAAAAAACTGCTTCAACGATAATA 41017 30 100.0 37 .............................. ATAATGAAAACCTCCCTTCCTGCATGAAGGGGAAGGG 40950 30 100.0 37 .............................. TAACAATTTTTGCATATAATAATATTTTCATATTCAT 40883 30 100.0 38 .............................. TTGACCCTGAAGGTGAAAAAGTGCATAAAAATTTCTAT 40815 30 100.0 36 .............................. TTGCCCTTCAAATCTGTAAACAAATGGTGCCCAAAA 40749 30 100.0 36 .............................. TCATCTCTGTGAAGGTAATCATCAAGATAATCAATA 40683 30 100.0 36 .............................. TCCATATAGTCAAAAACTATTTTTCTATCCTTCCTT 40617 30 100.0 36 .............................. TCATCTCTGTGAAGGTAATCATCAAGATAATCAATA 40551 30 100.0 36 .............................. TCCATATAGTCAAAAACTATTTTTCTATCCTTCCTT 40485 30 100.0 36 .............................. TCATCTCTGTGAAGGTAATCATCAAGATAATCAATA 40419 30 100.0 36 .............................. TCCATATAGTCAAAAACTATTTTTCTATCCTTCCTT 40353 30 100.0 36 .............................. TCATCTCTGTGAAGGTAATCATCAAGATAATCAATA 40287 30 100.0 35 .............................. TATATATTCAAGTAAACAGTCAAGACATCCGTCAA 40222 30 100.0 35 .............................. TTGTTTCAAGGACTTGGGACATAGTAATGCAAATA 40157 30 100.0 35 .............................. TTTCATATTCAGCAAGACAGGATATATCAAAATGA 40092 30 100.0 38 .............................. AATTATAACTATAATAACTTTTCCATATATTATTATAT 40024 30 100.0 36 .............................. GCTGGATATATATTGACAAAGTTTCATTTTCCGCAA 39958 30 100.0 36 .............................. AGTGACGATGGTAATCAAAAGTAAAAACAACTTCTT 39892 30 100.0 36 .............................. TCCTTTTGTTGAACAAACTACTTTTTCATTGCAAAA 39826 30 100.0 37 .............................. TAGATGAGGCTCAGAGATGGCTTGGTGTGAAGAAAAG 39759 30 100.0 38 .............................. AAACAAAGGAGGTAAAAGATGGAAAAGATGGAAAAGAG 39691 30 100.0 39 .............................. GAATATTATTGGGGAGTGGTGAATGGTGTTATTCGGGGA 39622 30 100.0 37 .............................. ACTTTTGTCTTTGTGCTCTTATTTCATATTCAGCAAG 39555 30 100.0 38 .............................. TCTTCCCACTTATCCTGCTGCAGTTTACCTTCTATTAA 39487 30 100.0 37 .............................. ATATAAGGAATTCCTCATATAAGTTTAGCTCTCTGAG 39420 30 100.0 37 .............................. TATAACAATAGTGATGGTGTATTCTTTTTTGACGATG 39353 30 100.0 41 .............................. ATCCTCTGTTGCAGTTTTTATGACGGCAACAGCACCAGCGA 39282 30 100.0 36 .............................. TGCTCACGTTGTCGTTTTCCTCGCTACCAATGAAAG 39216 30 100.0 36 .............................. TCGATTTTGACAATTCCGTAAGATTATCAGTACCAT 39150 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 30 30 100.0 37 GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Left flank : AAGCGTACCTCTAAGGAATTGAAACTATTTGGATTTTTTGTTGTTGGTAATATGTTTGTAT # Right flank : AATGATGGAGGAGCTATGGGACTTGAAACTGTTTTTGGATATTTTCTGGCTGGATGCGTGATAGCTGTAGTAATAGCTCTTTTTGTAGCCATTTTAAGCATTGCTCTTTCTCCTGTTATCGGCGTTATATACCTCATAGCTGATTGGTACGAGAATAAATCTTCTGCTGGTAATCTCTCAGCTTCTCAAGAAGAAACTGAAGCCTCTTTAAAGGAATGTTTAGAAATTCACCGTAAGAAATTTTCAACTCCCTCATCGCAACAATGCCCCTAAAAGGAGACTTAGCCCGTTTTCTGAAAAACTGTGTAAGGAATTGCGAAGTTTTAAGCGTACCTCTAAGGAATTAAAACATTTATTCAGAAAAGCTTTGATAGGTTTCTTCTTTTGAAACATCAACAGCTCCAACACAGGTTTTAAGTTTCTCCCAACCGTATTTCTCAACTATTCTCTTTTTAGCCTCTTCTGGATTCCAGCTTGTATCAGGAGGAGCTATCAGGTAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 104485-106274 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOB01000002.1 Desulfurobacterium atlanticum strain DSM 15668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 104485 35 100.0 44 ................................... TTGTAGTAATACATACCTACTACTCTCCTTCAGCTTACACACTA 104564 35 100.0 32 ................................... TCCTATTTCTTCTAGTAACATTTTAACAACTG Deletion [104631] 104631 35 100.0 35 ................................... TCATGACAACTTCTTCCATTCTCAACCTCCTTGAT 104701 35 100.0 42 ................................... CCCTCTTCAAGTTTTTGAGGAAATTGAATCATAACGAATTTC 104778 35 100.0 37 ................................... AATTGTTACATCATCAATAGTTTCAGAATCATCATAA 104850 35 100.0 45 ................................... TTTAGCCTAGAAATCCTATAGATGAGGAATTATCACCAGTAGCAT 104930 35 100.0 37 ................................... TTCTTTCCGCAATTCTTTTATAATCCTCTTTTTCCCA 105002 35 100.0 43 ................................... TCAGCTTGGTTGCTGAAACGATCCTTTTTCCGAAATGTTCTTC 105080 35 100.0 39 ................................... TTTATTTTGAAATAATCTTCAAATGTGTCATAACAATTT 105154 35 100.0 45 ................................... TATAAGATATGCAGTATCCGTATTTGGCCGGATTGTGAACTTAGA 105234 35 100.0 46 ................................... TTAATTTTTGCTGATTAATATTAACGTGTTTATTATCGGATTTTTC 105315 35 100.0 44 ................................... CGGGCTTTCATCCCCTCCCGCAAAAAATAAAAAAGGGGAGGACC 105394 35 100.0 37 ................................... ACAACTTCCATTTCAACCTCCTTGATTTTATTTTCAC 105466 35 100.0 43 ................................... TTTCAAGTCATTGATATATTCTTTCGTCATTTCAATCGAATTA 105544 35 100.0 46 ................................... TTCTTTATCATGTTAACCTCCTATAATCATATGTAATTAAAGAAGA 105625 35 100.0 45 ................................... ATGTTTACAATGAAGATGATTCACAAGATGGTGAAGAAAGTGTAG 105705 35 100.0 41 ................................... ATTCTTCGTCTATTAAAACAAATCTGTATCGTACACCTTCG 105781 35 100.0 44 ................................... CTGTTTGTAGACAATATATTTATTAATGATTTTATATCTGTTAA 105860 35 100.0 40 ................................... TCTAAATCAATTATTTGCCACGGTCCCCCTATTTTTTTTG 105935 35 100.0 36 ................................... CTAATAATTATGTACTTATCTGTTTCCTTGATCTTT 106006 35 100.0 43 ................................... CAGAAAAATATGTATAATCTCTGCAAGTATAAAAACACCGCAA 106084 35 100.0 43 ................................... CAGAAAAATATGTATAATCTCTGCAAGTATAAAAACACCGCAA 106162 35 100.0 43 ................................... CAGAAAAATATGTATAATCTCTGCAAGTATAAAAACACCGCAA 106240 35 94.3 0 ................................G.T | ========== ====== ====== ====== =================================== ============================================== ================== 24 35 99.8 41 GTTGAAATGCCCTATAAACTGAGAGGGATTACAAC # Left flank : TCTTATTTAATTCAATGTATTATAAAGCTTGGAAAAGTTGATGAAAATGAGGTAGCTCTATGAAATTTAAATTTTCGAAAAGAATTAATAACTATGTAGTAATATATGATATACTTTCTGATAAGCGTAGAGGTTGGATTTCGGCGGCAAATAGAAGAAGGACAAAAGTTTCAAGAATATTGATGGAATATGGGGTTAGAACACAAAAAAGTGTATTTGAAATTGAGATTAATACTCAGAAAGATTTTAATAGGCTGATCAGAAGTTTGCAAAAGATAATGACGAAAGACGACAAAATATACATTTACCCTATTGATTCAAAAAGTTTAAAAAGAGTTAGAAAACTTGGAAGTATGATAGAATATGACTTTTTCTTTTGAAATAGATATGTTATAATGCGCCTAATAGTTCTTTGAAAGATGAATATGCTTTAGTATTCTAATATTAAAATGCATTATAGTATCTAATAACTATTGTAAATAAGCTTGTTTAAGGCAAGT # Right flank : TGAGTAGGTTTATTTTTTAGTTTAAGTTGTCCTAAACTTGATAGCTAAAAGCGAATTTTTGTTTTTAAAGATTCCCTGTCCAACGAAAAAAAGAATATTTTTATTTTAGAAAAACTTAAATCAAAAAGAGTTATATGTATGAATGAATTTTCTAAGATTTCTGAATGAAATCTTCTATAATTTTTATAGTCTGCGTATCATTTTTGTATCTTATGCTTCTTGTAATAGGGTTATACTCCAATAGATTAGTTAAAAGTCCTGAGTGAGCTATAAAATTCCTATGGCTGGGGTTTTTGCTTGTTTTAAATTTCTCGTTTTCATACTCTTGTGCATTTTTCCACATTTTTTCTATTATAGGATTGTCTTTTCCGAAATTAAAACTGATACTGGAATTTGATGATTTATGATTAGAGGTTAATTTCTTTAGTCTATCTATATCTTTAGCTAGCAAGATTTCGTTTGGAGAGTCTTTTCCAAATATTTCCCTATAAATAGAGGAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATGCCCTATAAACTGAGAGGGATTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 109685-109118 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOB01000002.1 Desulfurobacterium atlanticum strain DSM 15668, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 109684 35 100.0 41 ................................... GATATACATACTTTCATTAATTGATAATTCTCAAACTATTA 109608 35 100.0 36 ................................... AACATACCAACCTCCTATTTTATTTTATTCACTATA 109537 35 100.0 38 ................................... TTACAAACGGGGCCATTTACAAGCCCCGACTGTAAGGT 109464 35 100.0 41 ................................... TTGGGGGAGAGCAATTCCTTTATTTTTGAAGGGAATTTTCT 109388 35 100.0 45 ................................... ATCGGCGCTATTAGATCATCTATATCTATTATATCTGTTGTGTTA 109308 35 100.0 44 ................................... CTTTAATTGTTTCATCTTTATTGATTTTGCATTCAATTCTACGA 109229 35 100.0 42 ................................... AGAGGCTACTCCTCCCACCACTCATCAGTAATTTCAGGGAAG 109152 35 97.1 0 .............G..................... | ========== ====== ====== ====== =================================== ============================================= ================== 8 35 99.6 41 GTTGAAATGCCCTAAAAAACGTGAGGGATTACGAC # Left flank : ATGCAATGAAAGTGTGGCAGGAAGGAAAAGACTTTAAAGAACTTTTAAAATCGGATGAGAGAGTTAAGAAAGTTCTTACAGATAAAGAGATAGAAGATATCTTTGACCTTTCTTACCATACAAAACATGTGGATTACATTTTTAACAGAGTTTTTAATACTTGAAACCTTGAAACTTAACTGAGGCTGTTTGAAAAATGGCTATGAATTTTAAGAGATCCTTCGGGCTTTGCCCTCAGGATGACTTTCATCGTCATTCTGAGGCTGCTTTGCAGCCGAAGAATCTTAATACCTTTTAGAAACAAATGAGAATTTTCAAACATTCTCAAACTTGACTGTATTTAAGTGGAAAAATTTGCTATCATTTATGTGTAGCTCTTTGTAATATGAATAAGGTAAATTTTTAGAGGGTCAGAGGCTTTGAGCTGTAGCCTATATTAGATATTTATTAAAACTTTAAGTTTTGTAGGCATTGAATTTCAATGCCCGAATTTTGCCACT # Right flank : TTCTGTCAACTCTTCATAATTCATAATAACTCCTATGAAAGATGTCAACTCCCAACACAGAGGTTGCATTTATTATCAACAAAATCCATAAATTGCCTTTTCTGGGAGTGTCCACCAAAGTGTGTAAAAATAAACAACAGACAAAACAAGGAGGTGGACACCATGAAAAGCGGATACAACCCTGAAGAAGTAAAACAGAAGATAAAGACACTAATTCAGTAAACACTTCAAGAAGCATTAGAAGCTGAATTAGAAAAATTCTTAGGATACTCAAAATATGAACGAACAGAAAAAACAACTACAGAAACAACCGGGTTATGTAAAAAATCTTGTGTAAGCTATTTGGGATATCTCATAGAGAACATTTCTTAAATTTTCTTTTTGGTCCAAAAAAACCGTTTACTACTCTTTTAGATCATCTACACTTGCATATAAAAGCAAAAATAACAAATGGGGAAAACTATTATAACTTAACACTTTTCCATTATTTCTATAAAATC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATGCCCTAAAAAACGTGAGGGATTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 214079-209482 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOB01000002.1 Desulfurobacterium atlanticum strain DSM 15668, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 214078 30 100.0 36 .............................. TAATTTCACTGGGGTTTTACACCCCAGTGGCTCTAA 214012 30 100.0 36 .............................. TTGGTTTGTTATCTAGATTGAATAAAAATCTAGATA 213946 30 100.0 42 .............................. TGAAAATAGCAGGGGCAAATTTATCAACTACGGTAAAACCTT 213874 30 100.0 37 .............................. TTGAATAACGAAAATGTCAAAATGAAAATATACGATA 213807 30 100.0 37 .............................. ACAATACCTTTATCGTAATCTTCTGTTATTGGATATC 213740 30 100.0 38 .............................. ATATCAGAGGCAGGTATATTCTTTACTGACGGTACTTC 213672 30 100.0 40 .............................. CTAATTTATTTCACCAGTTTTCAAATTCAACGACTTGCGT 213602 30 100.0 38 .............................. AAGATAGTGTAACTAACGACTATACTACACTAAAAGCT 213534 30 100.0 37 .............................. TGTTTATATTTTCTTGAAGTTTATAATCGTTTATTTC 213467 30 100.0 39 .............................. GATTACGAATCCGGCGATATCGTATTCAAACCTAATATA 213398 30 100.0 37 .............................. ATAAACAGGCTTGGATGTATTTTTATAACCGACTTGA 213331 30 100.0 35 .............................. CGATCCAACACCACGAAACATTACAGTTCCATATG 213266 30 100.0 35 .............................. GGAAAAAGCTCAAAAAGATAGCTAATCTCCAAAAG 213201 30 100.0 38 .............................. TAATTAAAAATAATATATATTTAGGAGGATAAACGATG 213133 30 100.0 35 .............................. ACTCAAGCAACGCTTGAGTGTCAGAATCAAAATCT 213068 30 100.0 36 .............................. AAAATATCCACCCTATAACATCTTATTCCTTTTATA 213002 30 100.0 37 .............................. CATTGTAAACAGCAGTGTAATATGACTGTGGTTTAGG 212935 30 100.0 36 .............................. TGAGCAAATACAATCTTATCTCTTTTAAATGCAATT 212869 30 100.0 38 .............................. TAAATATGTTGATTTTCTAATAAAAAAATATAATTTAA 212801 30 100.0 37 .............................. TCTCGCAAGGCGTAAGAAACAATATCCTTTCTCTCTA 212734 30 100.0 38 .............................. AAAGAACGGCGGCGACGAGAAAAGAAAGACAGCGGACT 212666 30 100.0 36 .............................. CTATATCCCAAGTTTTTGAAACAATTATCGTATATA 212600 30 100.0 37 .............................. TAGCATCATCTGGAATAGTCTGAACTGGAGCGTCAGG 212533 30 100.0 40 .............................. GGAGCTTTGCTTGGAGTTGAGAGACTTCCGGCTCAACCTG 212463 30 100.0 37 .............................. AAGCGGCATTTAATAAAGCCGTTCACTGGAAATATAC 212396 30 100.0 36 .............................. TATGACGGCGACGCTAAATCCCTATCTTCCATTATT 212330 30 100.0 35 .............................. AGTTTTTTTCATACAATAATATATACCCGAAACAT 212265 30 100.0 38 .............................. GACATCCTGTAAGTGGAAAAGAGCTATTTATAGGAACA 212197 30 100.0 35 .............................. TTTTTGTGTTTGATAAAACATGTTCTAAACTATTT 212132 30 100.0 35 .............................. TTTTTGTGTTTGATAAAACATGTTCTAAACTATTT 212067 30 100.0 38 .............................. TCTTTTATATTGAATACAAAATCTAATACAGGTTTTGT 211999 30 100.0 39 .............................. GTAGAGCTTGACAGCACCGAAAATGCACTTGCCGCCTGG 211930 30 100.0 36 .............................. TCTTTATAGGAAACAAACATTCCCAACAGACATCTG 211864 30 100.0 39 .............................. TGCCACCAGCATAACCAAGTTGAGTGTATCTTATCCCGT 211795 30 100.0 37 .............................. ACAACGAGACTTTCAACTTTTTCTGTAAAGATGTTAA 211728 30 100.0 36 .............................. ACCGTGAGATTAACCTTCTATAAGTTGCTTTCCCTA 211662 30 100.0 36 .............................. ACCTCCTTTTTCTCGGTTTTCTTCATTCTACCATAA 211596 30 100.0 40 .............................. TTAACAAAACAAAAAAGGAGGTTGGAAATGATCACAAAGG 211526 30 100.0 41 .............................. ACTTAGGAAATTTATAAACTGTAGGATTTCCATTTGTATCT 211455 30 100.0 38 .............................. ATAATACGGCGCATATTATAGACAAAGCTACTGGATTT 211387 30 100.0 36 .............................. CACAATTGTATAATTACAGATTTATGCTTAATCAAT 211321 30 100.0 35 .............................. CTTTCATTTTATACCTCCTTTTTCTCGGTTTTCTT 211256 30 100.0 36 .............................. TAAAGATAGTACATATGAACCTATTGAGTTATTTGT 211190 30 100.0 37 .............................. TCAACACGTAGTAAATCTGTGTTGATAATTCTTTCGA 211123 30 100.0 38 .............................. TATTTAACCTGTTATATCAGCAATAAAGTGTAAAAAAA 211055 30 100.0 37 .............................. TACAATAATTACATGTTTTGCCACACTTCACATTCTT 210988 30 100.0 37 .............................. TTGATCTAAAAAAAGTTGCTTTTATACTTGAATTATC 210921 30 100.0 37 .............................. TTGATCTAAAAAAAGTTGCTTTTATACTTGAATTATC 210854 30 100.0 37 .............................. TTGATCTAAAAAAAGTTGCTTTTATACTTGAATTATC 210787 30 100.0 37 .............................. TTGATCTAAAAAAAGTTGCTTTTATACTTGAATTATC 210720 30 100.0 38 .............................. TAGTAAGCTCATTCATACCTACAGAAGGTATATATATG 210652 30 100.0 37 .............................. TATTTGGATTTTTTGTTGTTGGTAAGGTTATGATATA 210585 30 100.0 38 .............................. TAAGTTGCTTTCCCGATTTTTGCTATCTTTTTCATCTT 210517 30 100.0 40 .............................. TATTGATGGAATAAGCATTCTTAATAAGGTCAAACACCGC 210447 30 100.0 34 .............................. TCTTCAATTATAATATTCTTATATTCCTCACCAA 210383 30 100.0 37 .............................. TTACCAAAACAAAAGAGAAGGAGGAAAGAGAGATGAG 210316 30 100.0 36 .............................. AACTGACTTGCTAAATCTTCTTCTATTGTATCTAAA 210250 30 100.0 36 .............................. TAGGATCAAACATATAATACTTCTCTAAATCCATCA 210184 30 100.0 39 .............................. AATTTGGAAACTACTTGACCGACATTTTCAGCACCGATT 210115 30 100.0 36 .............................. CCATAAAAGAAACCAACTTCTAGAAAGATTTTACGA 210049 30 100.0 38 .............................. AGCTATCTCTTTAAGGTATGATTTAGTTTTTACTGCTT 209981 30 100.0 39 .............................. ACACAATAGAAGTCAGAGGAAATGAAAATCCTTTCCCTT 209912 30 100.0 36 .............................. GAATAATCAACAAAAAGAATCTCATTATTTTCTAAA 209846 30 100.0 35 .............................. AGGGATTCTATCTGGGATTCCTCTTTTGCCGGAAA 209781 30 100.0 37 .............................. TATCTAAAGCAGAAAGGTTTCATTGAAGCTAAAGGTG 209714 30 100.0 38 .............................. CTATCTAATAATAATGATAGATATTCAAAATGAGTTTT 209646 30 100.0 39 .............................. AGATCAGGATACCGTCTTTTGAGTTCTTCCATATCCTGG 209577 30 100.0 36 .............................. CGGTAAATTCCAGCATAGGTTTCTGCCTGTTCTGTA 209511 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 69 30 100.0 37 GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Left flank : GAGAAAAATGTGCCTTTGCTTGTAGAAAGTTACTTCTGGCATAATTTACCCTTTTATGCAGAAAGAAAGGTTGTTAGAGATGTTTCCTTTACGAAAATAAAGACTCAATTAAATGAAGGGAAACTTCTTGCTCTTGTTAAATCTGATGATGTTAAAAGGTTAGAAGATATAAAGATTTTATGGAAAGGGAAGCTTTATAGAAGAGGCAGTGAATCAAGATTTGCTATTTTTCTTAAATATGTTGCAAAAGCAATGCATGGAAATTTTAAAGGGTTTGAGGATAGAGTACTAATTTATCGTTGATTTATGATAAGTGTCGGGAATCCAATATGCGTTTTTATTTATGTAATTTACTTATTCCCAGTGTCTTTCTGCCAGTTATTATGTTTATTATAAATATCTTAATAATCATCCCCGACATTTGACTTCCAATATTAGGTAATGATAATATGTGTATAAATCTTGACGTTCTTTGAAAAAAGGAATAAGCAATAGAGTGG # Right flank : TGTTCCAGAGGTAGTAAAAGAGGTCGTTTTTCCCAAAGGTTTTAAGCGTACCTCAGAAATAAGATAAGAGTTATGATTGCTGTTTTATTGATTTAGGTTTTATCTGCTCCTACTTTAAAGCATTTATAGTGAATTATTCAGGATTCTTCCTACTATCAATTTCTACTTTTAAAGTATTTTTAAACCATAAGTCATGCTGAGGAAATGGTATTTCTACTCCAGCTTTTTTAAGCTCTCTCCAGGCGGTGTAGTAAAATCTGCTTCTTATTTCTTCTATTTTTATTTCTTTTCTTATATCTATCCAGAAAGATGCAATGAATATAAGGGCGCTTTCACCGAATTCCCAGAACCAGACTTTAGGCCTGGGAGTTTTTAAGACACCGGGCATGTTTTCAAGAACTTTTGTTAGAACCTTTCTTACTGTTTCAGGGTCTGAAGAGTAAGATACACCTACAGGAATTCTTAGTCTTACAAACGGATCGTGATGAGAGAAGTTCACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 43390-45156 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOB01000014.1 Desulfurobacterium atlanticum strain DSM 15668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 43390 30 100.0 37 .............................. TAGAAATAAAAAAAAAGAAAATGGAGGTAGAAAATGG 43457 30 100.0 39 .............................. ATAAATGATATATGTAAATGATTGCTTTCTGCTCGGAGG 43526 30 100.0 37 .............................. TTTATACAGAAAACAAAATCAAAGGAGGTAAAAAATG 43593 30 100.0 39 .............................. TTCAATAAAAGATAAGTTTTTAGAAAAATGTTATAGACT 43662 30 100.0 37 .............................. CTGTATCCCTCTTCAACGTATTTCCTAACCCTTTCTT 43729 30 100.0 36 .............................. GGGGGTTCTCCGCCATGCATAGCGTATAGTAAACTA 43795 30 100.0 36 .............................. ACGATATGCGTTGGTGGTGGAAGCTGTTTAAGTTCT 43861 30 100.0 37 .............................. CTTCCATATCTAACCTCCTTTCTCGGTTTTCTATATT 43928 30 100.0 36 .............................. GTGAGTATAGCGATATAGTTATAGAAAATAAGGATT 43994 30 100.0 37 .............................. CGATGCCCTGTTCAAAAATAAAAATAGGGGAGATAAA 44061 30 100.0 37 .............................. CGATGCCCTGTTCAAAAATAAAAATAGGGGAGATAAA 44128 30 100.0 37 .............................. CGATGCCCTGTTCAAAAATAAAAATAGGGGAGATAAA 44195 30 100.0 37 .............................. CGATGCCCTGTTCAAAAATAAAAATAGGGGAGATAAA 44262 30 100.0 37 .............................. CGATGCCCTGTTCAAAAATAAAAATAGGGGAGATAAA 44329 30 100.0 37 .............................. TAAACATTAATTTATTTACAATTTTATCAATCCTTAA 44396 30 100.0 37 .............................. TAAACATTAATTTATTTACAATTTTATCAATCCTTAA 44463 30 100.0 37 .............................. TAAACATTAATTTATTTACAATTTTATCAATCCTTAA 44530 30 100.0 37 .............................. TAAACATTAATTTATTTACAATTTTATCAATCCTTAA 44597 30 100.0 37 .............................. TAAACATTAATTTATTTACAATTTTATCAATCCTTAA 44664 30 100.0 36 .............................. ATAAATAAAAACAAAGAAAATGGAGGTAGAAAATGA 44730 30 100.0 36 .............................. ATATATCAATAGCACAAAAATCTAATTTCGTAGCAG 44796 30 100.0 35 .............................. CTCTCAGCTCTTTCATCACAAGAGCCATTTTTTAA 44861 30 100.0 38 .............................. TTAATATAGTCTTGTAAATTATATGCTGAATATTCCAT 44929 30 100.0 35 .............................. TTCTTGAACAAAACTTTTTAAAGTTGTCATATATG 44994 30 100.0 38 .............................. CGATGATTACGTTCATTGCGAAGACGCTATATATATTG 45062 30 100.0 36 .............................. TATAAAAGGAATAAGATGTTATAGGGTGGATATTTT 45128 29 96.7 0 .............................- | ========== ====== ====== ====== ============================== ======================================= ================== 27 30 99.9 37 GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Left flank : AATTCAGGATGAAATATATGAACCGTTTGTGATGAGGTGGTAATGTTTGTTATTTTGGTTTACGACGCTGGAGAAAAAAGAGTTCAAAAATTTTTAAAAATCTGCAGAAAATATCTTGTTCATGTTCAAAACTCAGTTTTTGAAGGTGAAATCACAGAAGCAGTATTGAAAATGTTAATAAATGAGCTTAAAACAGTTATTAATGAAGATGAAGACTCTGTATTAGTATATAAATTTAGAACCAAAAAATACTATGAAAGATTATCGCTTGGCATTGACAAACCTTCTCATGAAAAATTTGTTTTCTAACAACTGTCGGGAAAGAAAATTTATTTGATGGCAAGTTAAAACCTTGCCTCCCTAAGAATATCATAATACGCATAAGTTTTTTATAAATATCTTAATAATCATCTCCGACACTTGACTTGCGATATTAAGTAATGATAATATAGATATAAACCTTGACGTTCTTTGAAAAAAGAATAAATTATTTAAATAGG # Right flank : | # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAGCGTACCTCTAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 1 300164-303509 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOB01000001.1 Desulfurobacterium atlanticum strain DSM 15668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================================== ================== 300164 35 100.0 40 ................................... TTATTTCCAATTTAATTTTGTTCATCTCACACCTCCTTAA 300239 35 100.0 37 ................................... TTGTAAATATACAGCATTTTCATAACAACCTCCTCTT 300311 35 100.0 38 ................................... TATAATATCACTTATATTTGACGCCTCAATCGAATTAT 300384 35 100.0 38 ................................... TATAATATCACTTATATTTGACGCCTCAATCGAATTAT 300457 35 100.0 38 ................................... TATAATATCACTTATATTTGACGCCTCAATCGAATTAT 300530 35 100.0 38 ................................... AATATCTAGAAGTTTGTTATAACTAATATATGTTTTTA 300603 35 100.0 44 ................................... ATTTAATATTATTTTAGTATCTTTCACTATATCCTTATATCCAT 300682 35 100.0 35 ................................... TGTAATCAATACTTTCTAATTCATATGAACTAACT 300752 35 100.0 38 ................................... CCGCCAAATGGCGGCTGACTCTTCTTTCCAATTTTATT 300825 35 100.0 41 ................................... GATAATATTTCTAATGAAGTATCACCAACACGTTTCAATTC 300901 35 100.0 43 ................................... ACGCATCCCTGGCCACCCCCTTTCACCGGTGGTGCAAACGACC 300979 35 100.0 44 ................................... CCGGGTTTATTTCCCGGCCTCTCTATCTTTGGAGATCCCCTCAT 301058 35 100.0 38 ................................... TACAACATTTTCATGACTTACCACCTCCTATTTTATTT 301131 35 100.0 44 ................................... TTTAGCTAACATATTTATACTTGCATATAATGTTTTTGATAAAT 301210 35 100.0 38 ................................... ATTAAGTATCTTTGTTTATAGATCTTAAAGTATACTTC 301283 35 100.0 41 ................................... TAAATAATACCGAACTATCATTACCAACACTCTTTTTAACT 301359 35 100.0 42 ................................... CCTCAGAAGAGGGAGGGGGTTGATGCCCAGGGCATAGCCCTG 301436 35 100.0 41 ................................... TCGTATCCACCAGCAACGTACAATTTATTATCAAAGGACGT 301512 35 100.0 45 ................................... ATACTCCGTTTCAGATAACTTTTGAGGGAACTGGACTAATACAAA 301592 35 100.0 38 ................................... CGATAAGGAGCATGAAGAGTTCAAACATATTACCTCCT 301665 35 100.0 37 ................................... AGGTAACTTCTCCGGTAACTGAATCATAATATACCTA 301737 35 100.0 42 ................................... TCTCATGTTTACCTCCTAAAAATAATAATTTATTTCAGTATA 301814 35 100.0 36 ................................... ATTATATTCTAATATTGTTTGCATGAGCTTAAAGTG 301885 35 100.0 43 ................................... CAGGGTTCGGGATTCTTGATATGAAATAGATCCTCCTTGCGGA 301963 35 100.0 43 ................................... ACCGCCAAATGGCGGTCAACCTTTCTTTCTAGTTTTACTAATG 302041 35 100.0 40 ................................... CAAAAATATTTTTTTATTGTATAGAGGAGGACGGGGATTA 302116 35 100.0 38 ................................... ACACAACAAAAATAACTACTTCTATAAACATAATATAT 302189 35 100.0 43 ................................... ATATTTTGAGACTGAATAAATATTCAGAATATAATAACTATGA 302267 35 100.0 39 ................................... ATATTATCATTTACATATAGATCTATAAGTCTATTATAA 302341 35 100.0 43 ................................... TTATTGGTGGGTATGTCTATTATCATGCCATCTTCTATTTTAT 302419 35 100.0 33 ................................... ATCCGATATCTTCAATTTCTTCAACAGTATACT 302487 35 100.0 46 ................................... TATCCCTCTATTCTTTTATAAAGATACAACATTTTCATGACTTTAC 302568 35 100.0 39 ................................... ATATTATCATTTACATATAGATCTATAAGTCTATTATAA 302642 35 100.0 38 ................................... AAGATGAATAGATATAATTTCATCAACGGAATTACCGA 302715 35 100.0 37 ................................... AATACTACGACGACCAGAGAGGAGAAAACTCTTCCTC 302787 35 100.0 41 ................................... CCCAGGGCATAACCCTGGGCCACTAGACTTGCTATATCAGT 302863 35 100.0 42 ................................... AAAGTTGCTATATCAGTAAGGACCTCTTGAATGAGGTCCTTA 302940 35 100.0 46 ................................... TTGGATGTATCTCATCTACATCTATAATAAATGGGATATTTTTTAA 303021 35 100.0 40 ................................... AATCCAAAATCAGTTAATTTATTTAGAAGAGATATATTAA 303096 35 100.0 47 ................................... ATTTAGCATACTTTGGAAATATATCCATAGATAATCTAAATTTAAAT 303178 35 100.0 41 ................................... AGTATGTATTCTCCCATTTTCTTATAAATATACAACATTTT 303254 35 100.0 34 ................................... TATCCTTATATCCATATAACATATCCTTTAAAAA 303323 35 100.0 42 ................................... GCTTCAGGTGCGTGTATTCGTGAAGCAGCACTTTTATGGAGT 303400 35 97.1 40 .................G................. CAGGGTGGCGGGTTACCACGATATCTGCCTTTGACACCGT 303475 35 91.4 0 .......C...........T.............G. | ========== ====== ====== ====== =================================== =============================================== ================== 45 35 99.7 40 GTTGAAATGCCCTTAGAACCGAAAGGGATTACGAC # Left flank : TATTTGAACTTGAAATAACTTCCAAAAAAGAGTTTTCCAGAATGATTAAAAGATTAGAGAAAACTATGAATAAACATGATAAAGTATACATCTATCCAATAGATTCTAAAAATAAAAAGAAGATAAAAAGATTGGGATATGAAATTGAAACAGATTTTTTCTTTTAAGTTTAAATTTCTACCTGCACAAAATTTCTGGAAACCAGAATATGAGAGTGTTTGAAAATTCTCATTTGTTTCTAAAAGGTATTGAGATTCTTCGGCTGCAAAGCAGCCTCAGAATGACGAAGAAAGTCATCCTGAGGGCAAAGCCCGAAGGATCTCTTAAAGTTCATAGCCATTTTTCAAACGGCCTCACCAGAATATTTGAATCTTTCTTTTTTGTGGTATAATTAAAAATATAGATTAGATCTTTTAAAACTGAATAGGTTGTTTATTCTAATTATCAAATGAACAGGATAGTCTAAAACACACTGTATTACAGTGAGCTTAATAAGTGGT # Right flank : CCAATTTTAAATTTTTATGTTAGGATATTTGTAAGTTGGAGTGGGAAGTTTTTTGATAAAAATTCTTGTTTTTTTAATATTATTCTATCTCTATATTCTCTATGCCAGGTTCAGGATCGGGATATTTCATATTAAGGGATTCAAGTTTTTTAACGATTATTTTTGCCACTATGTAGTTTCTAAACCATTTTTTGTTTGCAGGGATAATATACCAGGGAGCATAAAATGTGCTTGTTTCAGCGATTACTTCATTGTAAGCATTAATGTAGTCGTTCCAGTATTTTCTCTCTTCTATATCTTCTTTATGCAATTTCCAGCGCTTTTTTGGATTGTCCCGTCTTTCAATCAAACGCTTTTTCTGTTCATCTTTACTTATATGAAGATAGAATTTAAGAATAATTGTTCCTTCATCAAAAAGCAGTTTTTCAAAATTTCTGATATGTTCATAACGTTTTATCCAGATTTTTTCAGGGATAAGTTTATGAACTCTTGTTATAAGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATGCCCTTAGAACCGAAAGGGATTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //