Array 1 496391-496723 **** Predicted by CRISPRDetect 2.4 *** >NZ_ULFH01000001.1 Klebsiella pneumoniae strain EuSCAPE_ES263, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 496391 28 100.0 33 ............................ CGACATCAAAAATTGAAATGGCGTTGTCATTAT 496452 28 100.0 33 ............................ AGTTAAAGCGCCACCAGCTAAGCCTGTGCCGGT 496513 28 100.0 33 ............................ TAGCGTGATCAATAGCATTGTCCAGGTGGGCGT 496574 28 96.4 33 ............C............... TTTTCGAACGTCATCGACGGCTTTTAGCATTTA 496635 28 96.4 33 ..................A......... CATTGGCTGTGGCGCCTGGACAATCGGCAAAGG 496696 28 85.7 0 .C....T............A.......T | ========== ====== ====== ====== ============================ ================================= ================== 6 28 96.4 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTTGACGGCGCCGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCGGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTTGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGTCGACAAGTAACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGACATCTAAATCATTCGAGTTTATTACTCGTCTGGATATATTATTCTTCATATTAATTATCTATGGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGGTATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 505477-506908 **** Predicted by CRISPRDetect 2.4 *** >NZ_ULFH01000001.1 Klebsiella pneumoniae strain EuSCAPE_ES263, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 505477 28 100.0 33 ............................ CGGTACAAAACGCTCCATGCCGATATCGCGCTC 505538 28 100.0 33 ............................ TATCAACGATGCGGTAAGTTACGCCGTCAATTT 505599 28 100.0 33 ............................ CCCAGTGGCAACCAGATCACCTGCCCCGTTATG 505660 28 100.0 33 ............................ TAAGCCAATCTGACAAATTTCATACTAGCCGTT 505721 28 100.0 33 ............................ TAAACCCCACCAGGGCGAGCCACGATTAACTGG 505782 28 100.0 33 ............................ CCAAGCAGGCTGGCGCCCGTATGCGCTCAGGCG 505843 28 100.0 33 ............................ TATCCACTGCAGCGTCCATGTCGCCTTAAGGTC 505904 28 100.0 33 ............................ TTGAGGGTTTCAGGTTTGATATCTTCGGCAGCG 505965 28 100.0 33 ............................ CTATGTGCCGTCGGGCCTGACGGTATCCGCGCC 506026 28 100.0 33 ............................ TTACAGGGACTGCGGCAGCGGTTTGAAGGTTGA 506087 28 100.0 33 ............................ CACCCGGACAGCATGGCGGTCAGATTTTTTGTT 506148 28 100.0 33 ............................ CTGGGCCTCATGGGCGAACGACATTCGCCTGAT 506209 28 100.0 33 ............................ CACGCTGACGGAAAAGCAGCAAACGCTGATGAC 506270 28 100.0 33 ............................ CCAAAACGCATTCAACTGAGATCAACGCATCAT 506331 28 100.0 33 ............................ CGGCTACTGGTCACTCGCCGGCGGCACCGCGCC 506392 28 100.0 33 ............................ CGACTGCAACGCCATCTACACGACTTTGTGCCG 506453 28 100.0 33 ............................ CAGGCCGCAGTCGCGTTAATGGTGTGGACGCTG 506514 28 100.0 33 ............................ TCCCTGATATCTGCAAATGCCTGGGTAAGTCCA 506575 28 100.0 33 ............................ CGCGGGTAGTACGCTGGCGGGCATTCCGTTTAC 506636 28 100.0 33 ............................ CGTGTCGGCGGAGTTTGACAGGCTGACAGCCAG 506697 28 100.0 33 ............................ CTTGGCCCCGCGCCACGGGCGGCACGGTAGCAA 506758 28 96.4 33 .......G.................... TGAGATGGTCTCCGCCCCTTTGACCCGGATCCG 506819 28 100.0 34 ............................ CAGGGCGCAGTCGAGGAAGAAGATACAGATCAGC 506881 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 24 28 99.9 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCTCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : CTTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGCATTAGAATAAATATTTTATAGCCAACGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGTAGAGGTAGGAATATTTTATTGCGATAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGCTACAAATTGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //