Array 1 188623-186315 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBEU01000003.1 Legionella pneumophila strain NMB002521 WA170380A-1-17_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 188622 28 100.0 32 ............................ AGTACTTGATTGTATATCCATCAAAGCTCGTT 188562 28 100.0 32 ............................ GGTCATTTTCCCCTATTGCTGGGTCTACTCCG 188502 28 100.0 32 ............................ CGTAACCCGGTGGAAGGTAGTCCCTTCATGGC 188442 28 100.0 32 ............................ TCAAGGCGGCACGCCATGTTGCCCCTCGGCAT 188382 28 100.0 32 ............................ AGATAAGTATCCTTGGACTCGTAGGAATGGTA 188322 28 100.0 32 ............................ AACTTACGTTTACCATTAGCAGTCAATTGAGC 188262 28 100.0 32 ............................ TTGGCTAAAAAGATTTTACGTAAGCGATCTGA 188202 28 100.0 32 ............................ ATTGACAGTCAGTTGAGCAGAACGAAAACCTT 188142 28 100.0 32 ............................ AGATAATCCTTCTGATTACGTCCTTTTGAGGC 188082 28 100.0 32 ............................ TACCATTAATAACAACAAAATCACCATTATAG 188022 28 100.0 32 ............................ TACTGGTGATGCTGCTACTGGTTCTAATTGGA 187962 28 100.0 32 ............................ TTATGGTTCACTTAATATTAAGCATTTTCAAG 187902 28 100.0 32 ............................ TGATAATCCTGCTGATTATGTCCTTTTGAGGC 187842 28 100.0 32 ............................ TCCAGTTGATAGAATTAAGGCTCTTGGTGATG 187782 28 100.0 32 ............................ ATCATACGTTGATATGATGTATTAGACATACG 187722 28 100.0 32 ............................ ACAAGCAAATTTGGCTGCTTTTGGTACTGCTA 187662 28 100.0 32 ............................ TCATTCAATTGGTGTTGCTATTGAGTTTTTAA 187602 28 100.0 32 ............................ CAAACAAGTCGATAAGGAACAGCAAAAAAGAA 187542 28 100.0 32 ............................ TCAAGATAAACAGAATCACCTTTCTGGTAAGA 187482 28 100.0 32 ............................ AACAAGCTCAGGAATTAAACCTGCTCTAACAA 187422 28 100.0 32 ............................ TTTTGGGGATTGTATGTCGGCAATTTATGGTA 187362 28 100.0 32 ............................ TTTCAATGACGTATACACACAAATATGGGCTA 187302 28 100.0 32 ............................ ATATACTAGGCCATCACCATATACTCGGCCAT 187242 28 100.0 32 ............................ AGCAAATATGAAACTAACACCAGAAAATTGCT 187182 28 100.0 32 ............................ CCAGTCAATAGCCTTAGCCGGCTTTCCATTGT 187122 28 100.0 32 ............................ TTATGGACGTTAAGGTTGTAAAGGTATTTTAG 187062 28 100.0 32 ............................ TAATGATTTATTAATGTTGTTAATCTCTTTAA 187002 28 100.0 32 ............................ TGTGATCAGCGATTATGAGGTAGTAGCAAAAA 186942 28 100.0 32 ............................ TTACGTTAGAGTAGTAAATGACGAGAATATAG 186882 28 100.0 32 ............................ AAGTACATCGTCAGCCTCAACTCCCTCTGTTA 186822 28 100.0 32 ............................ TAAAAGTGTCCTTAAATAAAAAGTAATTGTTT 186762 28 100.0 32 ............................ ATCTGTCACAACAATAATGGATGTTGCTGCAA 186702 28 100.0 32 ............................ AGTAAGAATAACGGAACGAATTTGTTTCCCGA 186642 28 100.0 32 ............................ TGAACAATCATTCCCCAAGGTTTTCGACTATC 186582 28 100.0 32 ............................ GCCAGCGAGTCTAACGATATAGAAAAATTAAA 186522 28 100.0 32 ............................ TATAAATTTAATACATAAGACAGTTAACCAGT 186462 28 100.0 32 ............................ GTTGGGCGTTGTTGGTACAACTGAGTCACCTA 186402 28 100.0 32 ............................ AAGCTTTTTTAAACTATTCTGTTGACGGGTAT 186342 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 39 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAG # Left flank : ATCCAAAATGAGGAGATTAGTTAAACGTGGTTCTATAACGGAAAGTGAGTTTCGACAATATAAAATTAAAATGTTTTCCAATGGTTTGGATTATCCATATGCTGAACTGGTAAGTAGTTCAAACGGAAAAAGATACCGCCGATATATTGAGTTTGGAGAGCTGCTCGATAAACCAATTTCTGGCGATTTTGATCAGTTTGGTCTTTCCAAAACTGCTACAGTTCCTTGGTTTGATTAGAAAAGAGGAATTGGCAAATCTATTGAATTTGATCAGTTTAAGAAGAGAATTTTGGCTAAGTCAAATATTTTAGTCTTTTATGGAATTAAAATAAAAAATAGTCTAGGCTTGGCTATTCTCAACTTCCAAATACTAATAATTTTGGTTCCTTAAAAATTTGTTTTAAAATCAGATGATTATAACTTGATTGAAATACATTGGGTGACAGAGTAGTTTGCATATAACTTTCTGTTTTTTCTGTTTTTTTATAGTTTATAATCGA # Right flank : TATCTGCACCGTACAGCAAGCGTAGGTCGGGCCAAGGCCCATAGCCGTCAAGCTAAGGAGAACACATCAAAAATTTTCTGCATTAAAAAGGGGGGCACAGTTCTTAATTTTAGTATCTTTGTTAGCGAAAAGAGCCAAGCTGTCATGGAAACTCTTAAAGAAAGTGTTTTAAACGGTAAGGAGAATTCCAAGCTCGAACAAAATCGTTGAGTTTGGTTATTAACAATTTACACGCCTTATAAAAGGAAACTTCTCTATTATTTTGGTATCGAACCGGGGCGCATAGTAAAAATAAAAACATCATCCCAATAAACTTGCCATAGGTCTCGATGACTACGCGTGCGGATTTTGTAGTACAAATACAATCAATATGCATTAATGATTTACTTAGTTTAAAGACTAATTCAATTTGCCATCGCCAAGAATAACACTTGCATATCTCCTCATTGCCTATTTGTGTTTCAGATGTGTTGGTAATATAAATGGACCAATCTTGTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //