Array 1 3827542-3823653 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCRO01000001.1 Delftia acidovorans strain ATCC 11299b, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3827541 32 100.0 35 ................................ AATCAGCCCTGAGTACAGGGCTGCAATCGACCAAG 3827474 32 100.0 36 ................................ CTGGCGCGTGGCGGCGCTGTGGCTGTGCAGTCTGGA 3827406 32 100.0 35 ................................ GGCCATGGCGCGGCGCAGGTAGATCGCCTGATCGT 3827339 32 100.0 34 ................................ CACATCGATGAACTTTCCCAAGACCTTTACGACC 3827273 32 100.0 35 ................................ CTTGCTGGTCGGATGTTTGTCCTGGTCGTTAACCC 3827206 32 100.0 34 ................................ TCCATCTCCATACCCAAGAACGCGGCCGGATAGC 3827140 32 100.0 34 ................................ TTCGCAGACGCTTCCGACTGGCACCGGTTGGTGC 3827074 32 100.0 33 ................................ AACTTGGCTGTAAGGCCCCGGTACGTATGGTCA 3827009 32 100.0 33 ................................ GGATTGATCTGCTGGGACTGCAGACCGTCCATG 3826944 32 100.0 34 ................................ GTATGCCGGGAGCATCTTGAACAGCTTGTTGACG 3826878 32 100.0 35 ................................ ACGGTCACATGGACTCCACCCGACGCCGTCCCGAT 3826811 32 100.0 34 ................................ GCCCAGCTCTTCGCGGATGTCGTCGTACATCGGA 3826745 32 100.0 34 ................................ CACAGCACCCATTGCTGACGCTGCGCAAGCTCAG 3826679 32 100.0 36 ................................ TGGACCGATAAAACCCAGCGCCTGCCGGTGCCCAAA 3826611 32 100.0 34 ................................ GGGGGCACGCCATGGCTCTGATCCAGCTCACCGG 3826545 32 100.0 35 ................................ ATGGTGCGGCTGCAGCCGCACAGGGCGACGATGCA 3826478 32 100.0 34 ................................ ACGCGCTCCTATGAGGAGGTGGCGCGCAAGAACG 3826412 32 100.0 34 ................................ TACCTGCTTCCCCCGCCCCTGTCGTGTCCATGCA 3826346 32 100.0 35 ................................ AAATCATCAAGACCAACGAAAAGCGCAGCGGCGTC 3826279 32 100.0 35 ................................ AAATCATCAAGACCAACGAAAAGCGCAGCGGCGTC 3826212 32 100.0 33 ................................ GAGCCGGCACCCATCCCGCCACCGCCCAGCGAC 3826147 32 100.0 33 ................................ TCGCCGGCCTGTCCATGCTCGGCATGGCAGGCA 3826082 32 100.0 35 ................................ ACGCATCGGGCCGGCCCATCATGATCAGTGCCTAT 3826015 32 100.0 35 ................................ GATCCGCGCGAAGGAAGCCCAGGAGCAGAAACAAA 3825948 32 100.0 33 ................................ GCGTCAGGACCAAAAGCAATCATGATCTCCATC 3825883 32 100.0 34 ................................ TTCCTTGAGGCTGCCCACCAAGGAGCCGACCGAA 3825817 32 100.0 35 ................................ TCAACGAAATACTCGTTCACCATCAGGTGCGACCT 3825750 32 100.0 35 ................................ GATGATGCAAACAAGGATTTGCGCGACAGGCTTGA 3825683 32 100.0 34 ................................ AAGCAGCTGGTGGACCAGTACGAAACCGCCCTGC 3825617 32 100.0 35 ................................ TTGATCCGGCTGACCGTGGACTCAGAAACGCCCAT 3825550 32 100.0 34 ................................ TGCAGCGCGCTGGCGCCATCGCCTTGCAGCTGCC 3825484 32 100.0 33 ................................ GATCACGGCTGAAGGTGATGCTGGTGGCGGGGG 3825419 32 100.0 33 ................................ ACGCCTGACGACATCAATTTCGCTGCCTACGAG 3825354 32 100.0 33 ................................ AGCCAATCGCTTGCGAGGCCGAGGTTGGCGATC 3825289 32 100.0 35 ................................ TGCGGAGGCAGCAACTCCTGGGTCAACGAGCACTC 3825222 32 100.0 35 ................................ TCCCTCTACGCCAAGTACTGGGATGCGTTCACGCC 3825155 32 100.0 35 ................................ ATGATGCCGATCCGCAGATGCTTGACGCCGTCGTG 3825088 32 100.0 35 ................................ ATCGACAGCTGGCGCCCTGCCATTGAGGCAGAGTG 3825021 32 100.0 34 ................................ AAAAAATATCCAAGTGCCACCAAAGTCGAATGCC 3824955 32 100.0 35 ................................ ATCAGCGCGCTGGTTGAAGTCGGCTTCATCGACGG 3824888 32 100.0 36 ................................ GAGACCTGATCGTAGAACTGGACGGTGACAGCAACG 3824820 32 100.0 35 ................................ GCACCGAGTACCGAGCCAAAGCCAAGCAACTGAAG 3824753 32 96.9 34 ......................T......... CAGCGGCACCGATGCGGACGCCATCCGCGCCGAT 3824687 32 100.0 35 ................................ CAGTTGGGGAAGGTCTCAACCATTGACGGCATCAG 3824620 32 100.0 35 ................................ CCCTGCGGTCGCGAGGTTGCAGGCCTGTTTGTGGG 3824553 32 100.0 35 ................................ TCCAGGAACGGGCCGAGCGATGCGATGATCTTTTG 3824486 32 100.0 35 ................................ TGAACAGGCCCGATACCTGCTCAAGTGCGTCGCCA 3824419 32 100.0 36 ................................ CGTGCATGCCCCAGCCGGGGCGTGCGTTGCTGACGA 3824351 32 100.0 35 ................................ ACTGCATTAATGATCGTTAGCGGAGGGACTAAAGA 3824284 32 100.0 33 ................................ TTGAAACCGCTGATATGGGTCTCGGGTATGCCC 3824219 32 100.0 35 ................................ CAGGTCGACAAGGCCGGCAAGATCAACACCGACCG 3824152 32 100.0 34 ................................ TTCCGCATCAGCCGCTGGCAGCTGCAGGTCGGGC 3824086 32 100.0 33 ................................ AGCATGACCCCTGCAGGCATGCAGAAGTGGTTG 3824021 32 100.0 36 ................................ AAGGAATGGGTCCGTCGCATGAAACGTGCGCTCGGC 3823953 32 96.9 34 .........G...................... ATGGGGCAGGGGGCCTGGATGAGCCTGGCCGTGG 3823887 32 100.0 36 ................................ GATAAGGAGGCCTGTGCCTTCGGGCTGGAGCGCCTG 3823819 32 96.9 35 ............A................... AAGCAGGAGAGGGAGGTTGCCAACGACTGGCATTC 3823752 32 100.0 36 ................................ CGCGCCAGCCAGGGCATCACCAAGGCCCTGACGCTC 3823684 32 96.9 0 ................C............... | ========== ====== ====== ====== ================================ ==================================== ================== 59 32 99.8 35 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : CCGGCGATGAGAAATGAGGTGTGCCGATGATGGTCCTGGTGAGCTATGACGTCCGTACCCAGGACCCGGATGGTGCCCGCCGCCTGCGGCGCATCGCCAAGGCCTGCCGGGACTTCGGCCAGCGCGCGCAGTACTCCGTCTTCGAAATAGAAGTGGACGCCGCGCAATGGGTCGCCCTCAAGGCGCGGCTGATGCAAATCATCGACCCCGCCCAGGACAGCCTCAGGTTCTACTACCTGGGCCAACACTGGCGCAGCAAGGTCGAACACATCGGCGCAAAGCCCGTGCTGGACCTCGACGCCCCCCTCGTCTTCTGAACCTCCGCGCGAACCCCAAGTGACCGCCGCCTGCCCTTGAGGTTCGCAGCCGCGCAAGCTGTTGTTTTCAAAAGGGGGTGGGCGAGCGAATGGCTGAACGCCGATCCTGCAGCATGACAGCGCCGTATGGTTCGCGGAAGCCTGGCTTTTTTCATAGCGGTGAAATTGCTCTATAAGTACCCC # Right flank : CCCTGCCGCCACAGCAAGCGCCCCACGCATTTGAAACGAAGCGCCTGACTCATTCCTCGCCGCGCAGACCGCTATTGAGAGAGAGCCCACCCACTGCCTGCAGCAGGTACCCGCGTGCCTCATCCAGCGAGGGACCTGCATGCCCATCGATCCGCCGGATATAGGGAGATGTGAGCACAGCCATGGCATTGCCATCAGGCCCGAGGATGGGGCAGGAGATGTCCACCACGCCATAGGACTGCAGGCTTTCGCTCTGCCTGTAGCCCGTGCTGCGTATCTGTTCCAGCATGTCGTGCAGCTGTGCCTCGGGCAGATGTACCTCGCCTTCCAAAGGCGTGTGCTCGGCCAGCATCTGCGTGCGGCGTTCGGGTGTCTGGCAGGCCAGCAGCACATGGCCTGACCCGGTGTCCAGCAGCCCGACGCGTGCGCCCAGCCTGATCGACAGGCCCCAGTTCCCGGGGCCGGGGACCTGGGCCACGATCAGGACATTGCCACGGTCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //