Array 1 15831-9330 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCYK01000012.1 Leuconostoc lactis strain aa_0143 Scaffold_0012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 15830 36 100.0 30 .................................... GACACAGTCGTCCATACCACAGGTGATGAA 15764 36 100.0 30 .................................... TCACAACAGAGTATTCCAGTGCTAATGAAT 15698 36 100.0 30 .................................... TTTAAACCAAACTTCTAAAACAGACTTCCA 15632 36 100.0 30 .................................... GCAGGATCAGATTAGAATTGAGACAATGAC 15566 36 100.0 30 .................................... ATTGGCTTCCACCCATGTTCAGATTAATCT 15500 36 100.0 30 .................................... TAATGATCAATGGTATGGACGTTGTTTATA 15434 36 100.0 30 .................................... TTTCTATATATGAAGGTTGTCCGTATCTAT 15368 36 100.0 30 .................................... TCAAGAATGAATTTATCGACACCATTACTA 15302 36 100.0 30 .................................... GAAAACCTGTTTTAACAGGCTCTAATCTAA 15236 36 100.0 30 .................................... TAGATCTTCTCGTGATAAAAGTTTTGGTAA 15170 36 100.0 30 .................................... CAGTTACGACAAGAAGATGAACGGCTTAAA 15104 36 100.0 30 .................................... TTGCGTGCCTTGTCGTATGCACGATCCTTA 15038 36 100.0 30 .................................... GCGGATGATTAATTGACATGAGTGTTTGAT 14972 36 100.0 30 .................................... CGTTAGTGTTTTGGTTCTGACGCTGCCACC 14906 36 100.0 30 .................................... TCTTGTTCTGCTCGCATCAATGCCCAATAT 14840 36 100.0 30 .................................... CAGCATGCCAAGCTACATAATTCTCACCAA 14774 36 100.0 30 .................................... CTGGTATTCAGTCACTGATTATCATGAGTA 14708 36 100.0 30 .................................... CTAGTGAAATTAATGTATCTGCTGACGGTA 14642 36 100.0 30 .................................... TTCGTGCGATCGCCGCTGTTTCCTTTTCTT 14576 36 100.0 30 .................................... CTGACCGGTGTTGCTGCGGCAATTGGCCCA 14510 36 100.0 30 .................................... TCACAATGAAATGTTTACCGTCTATTTTTA 14444 36 100.0 30 .................................... TTGCGGCTTCATTGAAATCTGTAAACGGAG 14378 36 100.0 30 .................................... AAATGACAATGATGTTATCAGTCAAGCGTT 14312 36 100.0 31 .................................... ACGTTCCTTACTGGTAAACAAATCTTTATAA 14245 36 100.0 30 .................................... ATGTTGCTAAGCGTTCAGACAGTCGGACAG 14179 36 100.0 30 .................................... ACATTGATGGATATATATCACTCATGTTAA 14113 36 100.0 30 .................................... TAAATTCAATAATCGAGTATAGATAGATAA 14047 36 100.0 30 .................................... CCAGCAGCAATAAAACATATTTAGGATTAA 13981 36 100.0 30 .................................... GTGATGCAATGGCTAATGGGCAAATCACAG 13915 36 100.0 30 .................................... TGGTGTATCTGATGAAATTATCAACGGAAA 13849 36 100.0 30 .................................... TCTGGCGAAATAAACTATGCAAACCCAAAC 13783 36 100.0 30 .................................... AACACACATGACAGGTGGCGGAATGGTTAG 13717 36 100.0 30 .................................... CAAAGTAGTTTTTGACCGCTTCAACTGTCG 13651 36 100.0 30 .................................... TTAATTGGTGTCCCAATTGCTGTTAGTCCA 13585 36 100.0 30 .................................... AGCTTATAAAGTGAATAACTGATACTCATG 13519 36 100.0 30 .................................... CGTGGTTTACTGAACGAACCAATGGCACGT 13453 36 100.0 30 .................................... CTGATATGAACGATTTAGCATTCAATTCAG 13387 36 100.0 30 .................................... TTCGTCAATTGTTCGCGTAAAGGCTATTGC 13321 36 100.0 30 .................................... AAACAGAAATGTTTAGTTGGGTTATGGCTA 13255 36 100.0 30 .................................... TACTTGTCTAATTCATCTTGCAGACCCTGT 13189 36 100.0 30 .................................... CCAGTATTAGATGCCAGACCATTTACAAAG 13123 36 100.0 31 .................................... TACGCTTGGATCGTAACTGGTATCACATCAC 13056 36 100.0 30 .................................... TAAATAAAGATTTACATAAACACTTATCAT 12990 36 100.0 30 .................................... CTAATTGATCAATAACAGACCACCAATGAC 12924 36 100.0 30 .................................... ACGGATCTAAACACGTAAACAACAAGCAAG 12858 36 100.0 30 .................................... TCAGCAGATCCTCAAGAATTATATGTTTTA 12792 36 100.0 30 .................................... ATAGTCTACCAACTTTACTGTTTCTGGGTG 12726 36 100.0 30 .................................... AATACGTGGTACTTATCTCTAATATCCTTG 12660 36 100.0 30 .................................... TGCGCAAGTATCACTTGCAAATGGCAGTCT 12594 36 100.0 30 .................................... TTTCAGAGACCGCATTTGGTGTCATGGTTT 12528 36 100.0 30 .................................... CTGGTCGTCCAACGCAATACTCTTCATCAA 12462 36 100.0 30 .................................... TCATCGTGATACCTCGCTTCAAGTTCTCTC 12396 36 100.0 30 .................................... ATGACAATGTGACAGAGCAAGCCTTGCTGA 12330 36 100.0 30 .................................... GAGAATGCTCTTAGTGACGTCAAAGGTAGC 12264 36 97.2 30 ..........................A......... TGTTGTTGCATGACAGTCAGCCAGTTATTG 12198 36 100.0 30 .................................... CTTCACGCTTGGCGTTTTAACCGCCTTAGT 12132 36 100.0 30 .................................... CTCCTGTTTATTCTGCTATGGCATCTGCTT 12066 36 100.0 30 .................................... AAAAGTTGGCGGCGGCACGTGAAAAAGACT 12000 36 100.0 30 .................................... ATTGGTTGCAAAGCGAATTGAGTTTTTACG 11934 36 100.0 31 .................................... TCAATACTAGACCAATACGCAACGAGAATGA 11867 36 100.0 30 .................................... CAAAGCGCATCACTATTCAGAACAATAAGG 11801 36 100.0 30 .................................... TCAACTCGAAAGCCTTGCGAGCCGCCAAAA 11735 36 100.0 30 .................................... CCAGGTTGCTATCTACCTGAAGAGTTTCGT 11669 36 100.0 30 .................................... AAATTGAATAGTTGGCGGTCGAATCAACTT 11603 36 100.0 30 .................................... GATCCGTCAGATCAACGCCGGCAACTTTTA 11537 36 100.0 30 .................................... CAAACCACCACAACGCGACGCCACTCAAAG 11471 36 100.0 30 .................................... TCGTGTTCAATGAGTATGATATAATATTCA 11405 36 100.0 30 .................................... AGCCACCCGCCTGATATTGTTCAAGCAAGG 11339 36 100.0 30 .................................... GTGCGTTGTGTGTGCCGCTTTATAGTGTGA 11273 36 100.0 30 .................................... ACTTTTTTTAAAATTATTTTTTTAAGTTGA 11207 36 100.0 30 .................................... AAATAAGTACGATGAGCGACACCAGCCAAG 11141 36 100.0 30 .................................... ACAAAATACGCAAATCGCGCAACTGTTGAA 11075 36 100.0 30 .................................... ACTTGCGACATGTATTTATTAAGACTTTGC 11009 36 100.0 30 .................................... AAAACGGCGCGCGTTTTAAGCGGTCTATCG 10943 36 100.0 30 .................................... TTGCATGTGATCGCGTCGCTTGTCTTTGCT 10877 36 100.0 30 .................................... TCGCTTTCATCGCTTGACTCGCAGCGTTAG 10811 36 100.0 30 .................................... CTTACTCAAAAAGATCGCGACGCGATCCAG 10745 36 100.0 30 .................................... GAAAAACTTGGTATTTACATTTTGCCGGTA 10679 36 100.0 30 .................................... TATCAGCGGCGCGCGTGTTTGGGATTGCGG 10613 36 100.0 30 .................................... AAATAAAATAAATAAACCTTTATCCATATC 10547 36 100.0 30 .................................... AACGTCGCACCTCTAATATTCAAAACGTCA 10481 36 100.0 30 .................................... CTCAAACCCAAAAGCGCCACCACCCTCCAA 10415 36 100.0 30 .................................... GTTGGGCTTGAAGCAAATTTTGCTCAATGC 10349 36 100.0 30 .................................... ACAAGCCACCGCCACCACGCCAAAGACAAG 10283 36 100.0 30 .................................... AGCCACAAGCCCGACAAACCACGCGACAAG 10217 36 100.0 30 .................................... AAAATGAATTTATGTTCACACTAACATATG 10151 36 100.0 30 .................................... CGCAAAAATGGAACGGTGTCAAATTATAAG 10085 36 100.0 31 .................................... TTGTCGCTGGTGGCGTCGGGCTGGTGGCGGG 10018 36 100.0 30 .................................... GTAAAGGGGTAGCGGTCTGTTAGAAGCAGA 9952 36 100.0 30 .................................... TAAGAAGTTATCGGAAGCAGTAGATATTAA 9886 36 100.0 30 .................................... ATATTTATCGGTTTGCAACGCGTTGTATAT 9820 36 100.0 30 .................................... TGTCATTGTCATTATTGACTTAGATTGTAT 9754 36 97.2 30 ............C....................... GCGAGGGTGGCCTATTTGGCTTTGGCGGGG 9688 36 100.0 30 .................................... TTAAAGGTTTATAGATATTGGCAAAAAACC 9622 36 100.0 30 .................................... AAATATGGATAAATTTTATAAGCAAGCTGA 9556 36 100.0 30 .................................... GTCGCTCTCTAAATTTGCGAACTCGCTGTG 9490 36 100.0 23 .................................... CCACGCGACAAGCGCGCGACAAG Deletion [9432] 9431 36 100.0 30 .................................... TTAGAATTAAATATCTTTTTCTATCATTGG 9365 36 94.4 0 ..............................A.A... | ========== ====== ====== ====== ==================================== =============================== ================== 99 36 99.9 30 GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Left flank : AAACCATTGCGTCAATTGTTAACACAACATTTAGATGATTTACAGTTACGCGAATTGTATGAAACGGATCGCACTATGCGTCACATTGTGCAGCGGGTGTTATTTGAGAATGATTTGCCAGGTGAAATTGACACCGAATGGCAGATTTCAGAGCTTTTGAAATATCTGAAGCTACGCATAGAACTCCCAGAAACACACGGATTTTATGGTATAATAGAGAATATTATTGATCTTTCCCAACGCCTGAGTGATGACAGGTTATTGGTATTTGTTAATGCGAGTGTTTATTTGCGTGATGAACAAATCAAAGCACTTGCATATGATGCAATGTTGAAACAAGTCTCGTGCTTATTTATTGATAAACAGACCACCGTTAATTTTATTGGTGGCAAGGGATTGAAGCAGATTTTTATTGATCATGATTTCGTACAATTTGTGAGTGATGACACAAAAAACGAATAGATGTTTGATAATATATGTTGATTACGAACAACTGGTCT # Right flank : AAAATACACAATTAAAAGAGGTAAATAATGGATAAACTATTAACGTTTATTTTGATAATTGCCGCGCCGTTCATCGTGATTGGCATTGTCTATTTGTTTGGATGGCTTCTTACTGGTCTTATCATGTTGTTTGGTGTGAGCTATGCAAGCGCCAGGCTTGTAGGCATTGCTTTAGCGGTGTTGATCAGTTTTGGGTTTATCGGTTATCAGGGATTTAAGTAAATGGCCTTGTATACCATCATAATGAACACATAGCCAAATATAAAATCCCCTCACACGCTAATCCGTGTGAGGGGATTTTTACTAGACAATATAATCCGCGTACAACTTGCGTTCCAACTCGGACAATTCAACGGTAATCAGCGTGCCGGTCTCATCATAGTCCTCTTTGCTAAAGGTATGCTTAGCGGCGAGCTTGGCTTGCACAGCGCCTTGGTCAAATGGGATGTGGAGCGTGACTTCTTGGACGTCGTTGAAGATTTGCTTCTTGATTAGGTCAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //