Array 1 331542-326937 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNC01000002.1 Olsenella porci strain CA-Schmier-601-WT-1 seq2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 331541 29 100.0 32 ............................. CATACCAGCCGCCTCGCGCGCGAGTATATATG 331480 29 96.6 32 ............................T CCCGCCCGAAAAGCGCGTGAGGTGGGCCACCA 331419 29 100.0 32 ............................. GGACGGAACTCGTAGTAGCCCTCCTCGACCTC 331358 29 100.0 32 ............................. GTTGTGCATGGCCCTCGCGTGGGTGCTCTCGA 331297 29 100.0 32 ............................. AGCCGCAACGGCGGCACATGTGAGGTATGGGA 331236 29 100.0 32 ............................. CCATACGGCAACCTGCGACGCCATGCTGCTGA 331175 29 100.0 32 ............................. TCCTCGCCCTGGATCTCGAGGTTGACGTAGAG 331114 29 100.0 32 ............................. TGTCGTGCTGCTCACAGGTGCTGCAATGCGTG 331053 29 100.0 32 ............................. CGCCAGACGGGCAAGTGCCTCGACCTCAAGGG 330992 29 100.0 32 ............................. TCCGACCATTGCCAATGGCGTAACCACGTGGG 330931 29 100.0 32 ............................. TGCGCAAGGTTAGTTGCTGCCGTCTCCGCGTC 330870 29 100.0 32 ............................. GCAGAGCGGAATCGTGATTCTCACGAAGCCCG 330809 29 100.0 32 ............................. GCACTCTCATCGGCGGCGCGCGGGCTGGCACG 330748 29 100.0 32 ............................. GGATGGTGCCGCAGGTTCGTGGACGAGGTTCA 330687 29 100.0 32 ............................. TACATATCCCAGCACCTGGGAGTCTCGCGGCA 330626 29 100.0 32 ............................. CGTTTCAACGCGCCTTAACGCATGTCAGGTAA 330565 29 100.0 32 ............................. AGGCGCGATTCGCGGAACGCGGGGCGAGACAG 330504 29 100.0 32 ............................. GTCCGCCGTCCCTCCATGCGCAAGTCCCCAGT 330443 29 96.6 32 ............................T GGGCCATTCGCGGATTCGGCAAATTCCACGTC 330382 29 100.0 32 ............................. GAGTTCGTGAGCGTTGCCGAGAACCTCGTCAA 330321 29 100.0 32 ............................. AGGGTGTCGTCGCGCTCGCCCTCCACGATCTC 330260 29 100.0 32 ............................. GTTCCCCCGCTCACGTCCGCATACTTGCCAGT 330199 29 100.0 32 ............................. GAGCGAGAGGACCGGCAGGCACTTTTGGCTCC 330138 29 100.0 32 ............................. GGCGCACGGCCTGCCGCCCACCGTGGCCTGCC 330077 29 100.0 32 ............................. TGGTCTTTTGCAGCGACTGATTCTTGTAATCG 330016 29 100.0 32 ............................. GGCAGCGCGAACGCCTCCAAGGGCAACGTCAG 329955 29 100.0 32 ............................. GTCCAGCATCTCGACGCGATGAAAGTCGCAAC 329894 29 100.0 32 ............................. TCCGCCGAGGTGGTAATCGGCGGGGAGATATA 329833 29 100.0 32 ............................. AACGTCCCTTCCTTGAAAATGCCGCTTGCCCA 329772 29 100.0 32 ............................. GCCCTCTCGCCGGAGACCACGGTCTTTGAGCC 329711 29 96.6 32 ............................T CGACGATGAGGATACCTGGGGTGAAGGGACAA 329650 29 100.0 32 ............................. GGTCGCACCTCCACCGTCCACATCAACACCGT 329589 29 96.6 32 ............................T AGCCGGAGACACGGCGGAGGAGGCGTCATCGA 329528 29 100.0 32 ............................. AGCCCCTCCGAAGAGGGGCTATAAAGGTTTCG 329467 29 96.6 32 ............................T AAGCTGCGGGCGCGAGTCCTCGGCCGTGGTGA 329406 29 100.0 32 ............................. GGGTAGTCAACCGCGTGCTCCCACGTGGTCTT 329345 29 100.0 32 ............................. TCCCGAGCTTCCTCCGGGCTCGGAACCTTGAG 329284 29 100.0 32 ............................. AGTGTGCCGACGCGCTAGGGTATGACCTCACG 329223 29 100.0 32 ............................. TGACCGTGTGACCTGCGAAATCTCTGGCTCCC 329162 29 96.6 32 ............................A CGACTGCAGCTTGTCGTTGCTCCACCCAAGCT 329101 29 100.0 32 ............................. GTGCAGCAGTGGACGGACAACGGCAGTCGCGC 329040 29 100.0 32 ............................. TTCGGGGATGACATACCCACGGGACGGCTCGA 328979 29 96.6 32 ............................T CGACGCGCTGGCGTGGCCCAGTATCGCCGAGA 328918 29 100.0 32 ............................. GCACTGGCCGAGTACATCTCCGAGCATAGCGG 328857 29 100.0 32 ............................. TGCGCGAGGTTTGTCGCAGCCGTCTCGGCGTC 328796 29 100.0 32 ............................. TCCCTCGACGTGCGTGGCTATGACGTGACCGC G [328779] 328734 29 100.0 32 ............................. CCGTCGCGGTCCGGCATCTCCCACATGTGGGA 328673 29 100.0 32 ............................. CACCTAGACACGATTCGGAACTGGGCGCGTCG 328612 29 100.0 32 ............................. GGAGCCGTGTAAAGCTCGCGCCCGATGCCAAG 328551 29 100.0 32 ............................. CACGGCTCGCGCTCGTCGTACCAGCGAATCGA 328490 29 100.0 32 ............................. GGGCTAGAGATATCGTCGTTGAGCAGGTAGTG 328429 29 100.0 32 ............................. ATTCCGCAGTACGAGCCGACTGGCGAGTGCCC 328368 29 96.6 32 ......................C...... GTCTTGCCATCTGCGCTCTTGCCGACCGTGAT 328307 29 100.0 32 ............................. CGCCTGCAGTAACCGCACGTCACGTCGGTGGT 328246 29 100.0 32 ............................. GACGCGGGATTCACCGAGTTCCTCAACTCCGG 328185 29 100.0 32 ............................. TCCGCCTCGGGCTCCTTGGAGAAGAGCACGTG 328124 29 100.0 32 ............................. TACCTCATCTCCGATTCTTACGTCGTGGACAT 328063 29 100.0 32 ............................. TTTACCTTGTACAGGAACTCGCCCTTGTACTT 328002 29 100.0 32 ............................. GTAACCTGGGAGGACGCCGCCACCGAGGCCCG 327941 29 100.0 32 ............................. GCGTGCCTTTACGAGTGGAGCGACGCACTGGA 327880 29 100.0 32 ............................. GACACCACCGGATACCCCAAGAAGACCGCCGT 327819 29 100.0 32 ............................. GACTGGGCGTACTCCGTGACCTCGCCGGCCCC 327758 29 100.0 32 ............................. CGGCCTGGACGACAGCGCCATCTCAAGTTCCG 327697 29 100.0 31 ............................. CGCAACCTCATGATTCGGGCTTTTCAAAAAA 327637 29 100.0 32 ............................. CAGTAGCAGGCCAGCCCCGCGCCGAGGGTAGA 327576 29 100.0 32 ............................. CCAGTCTTGCCGTAGCCGCGCCCGACGTACAG 327515 29 100.0 32 ............................. TACAGCCACACCATGTTTTCATGACGTTCTAT 327454 29 96.6 32 ............................G AGGCCGAGGCCTGTCGCAAGAGGGACGAGGCA 327393 29 100.0 33 ............................. CTCGTGGAGCTGAAGAACGACAAGATTACCAAG 327331 29 100.0 32 ............................. TGCCGATGGGCTTATCCCGCACTCGTTCGCCA 327270 29 100.0 32 ............................. TCGGCGGTTTCGTGGGTCAAGGACAAGCTCAA 327209 29 100.0 32 ............................. ATCGCTCGTGGAGCGCCGTGCTTCTCGATGAG 327148 29 100.0 32 ............................. AGACAATCTGCCGTGGCAGGAGTGGGCCGCCC 327087 29 100.0 32 ............................. GACACATACCTCGCGGACAGCGAGTTCGACAG 327026 29 96.6 32 ............................T GAGCCGTGGTCTGCGGCGAGCCATCACCTCGT 326965 29 89.7 0 ....C......................TT | ========== ====== ====== ====== ============================= ================================= ================== 76 29 99.4 32 GTGCTCCCCGCATACGCGGGGATGATCCC # Left flank : AGAAGGTTGGAGAGGTTCCGGCAGGTAAGTCATATAGAGAGGGCTGAGGGGAAGAGGGGAGGTGACCGGCAATGGTGGTCATCGTGCTCACCGCCTGCCCTACTGGGCTGCGCGGCGACCTGACGCGCTGGCTGATGGAGATATCCCCCGGGGTGTTCGTAGGTGACGTCTCGGCTAGGGTGAGGGAGGCCCTCTGGGACCGCGTGCTCGCGCTCATCAAGACCGGGCGGGCGACGATGGCGTACTCGTATCCAAACGAGCAGCACCTTGCCTTCAAGGTGTGGCAACCGGACTGGGAGCCGATCGACTGCGAGGGGATAGAGCTTGTGAGACGCCCGAGGGGTACCGAGGATGCGACGATATTCGGCTCTCCTCCCAAGGGGTGGAGCCGCGCATCGAAGTATCGGCAGGCAAGAAAGTTCGGAAACTAGTTTTGAGGCGAACCTTGAAAACCGAATGACTTTCGTTGAAATGGGATATGATTCTGCTGGTCGTTAAGT # Right flank : GGATGAAGCCACAAGGGCGGCAATCCCAGTGGGTACAACCGGAACTTGCCGGGACGTCGGTTTTGTCGAGGTTCGGGAAGGGGTCTGCCGCGCATAGGGATGACTGGAGGCTGGCGGTGTTACCCGTGGCGGATACGCAAGGATTTGTCGCGTATGGGTATCCCCCTGGCTTTCCACTGAGCTTGGAGATTAGGCAGCCCGACTTGGGAGGGGGCAATGCCAACGGATGGGCGAGAGGAGCAAGTAAAAGATGGACATCGACGCTGTCTGCCGGTCGCTGACGGGTGTGGGGCTTGTCGACGCGGTGATTCTCGACACCGAGACCACGGGACTCCATCCCGAGTGGGATGACGAACTCTTGTCGCTCGCAATCGTGGACTCCGACGGGCGGAGGCTGTTCAACAGCCTCGTTCGACCGAGGCACCATGAGGCGTGGCCGCAGGCACAAAGGGTGAATGGCATCTCACCCGCCATGGTCTGGGACGCTCCTACCGCGGATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCATACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //