Array 1 177103-178910 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021256.1 Legionella pneumophila strain D-4954 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 177103 36 100.0 35 .................................... AAAAATAAGAATCATGGTCACGCTCCTAATTGATT 177174 36 100.0 36 .................................... ACTACTGTTTTATTATCGTTGCTCTAATCGCTTTAA 177246 36 100.0 33 .................................... ATAAACTATAATTTCCACAACACAATAAACTAT 177315 36 100.0 35 .................................... ATGTAAATAAATGATTACGTAACGCCGTTTCAATT 177386 36 100.0 36 .................................... ATGTCTCTGCTTGGAACTGTTCTCTCCCCATTTCAA 177458 36 100.0 36 .................................... TCTGTTCACCCTACACAAAAGCCCGTAGCTTTAATG 177530 36 100.0 35 .................................... CTTGATGTATGGCGCATACAAGCAGACGACGACAC 177601 36 100.0 35 .................................... TTTAACACATATTGATAGGCGTCTTTCTCTACGCA 177672 36 100.0 34 .................................... GAAGGTATGATGAGGATATCTGCTTTAGAGTGGT 177742 36 100.0 36 .................................... CCTGTAATTGCAGGTAAGGCTTTATTGACAGTTAAA 177814 36 100.0 33 .................................... TTTCTATGTTCAGTTTTCCAATTTATTATTGAC 177883 36 100.0 34 .................................... CCATAAGCCCCATCAAGATGGAAATTGCCCAGAT 177953 36 100.0 35 .................................... GTAAATACAACATGGTTACTAACTTACCGTGCTAC 178024 36 100.0 35 .................................... ACCGTGTCGGAACTTGCCCAAATCACGCCAAAACT 178095 36 100.0 34 .................................... GTGACATATTAGAAACCATGGCTCCAAAGCTATA 178165 36 100.0 36 .................................... GTTTATTAATGAATAGTTGCATTTTGTGCAGCAAAA 178237 36 100.0 33 .................................... GTTTAAACGGGCTTATTTACACCTAGTTCTGCT 178306 36 100.0 35 .................................... CGGTATTAAAACCTACATGGAAAGGTATAATGTAT 178377 36 100.0 34 .................................... ATCTCATATCCAGCCTCTAAATTTTTTAGTAAAA 178447 36 100.0 34 .................................... CAAGTAAATAACCTCTAAGGTTAATTTTGTATAT 178517 36 100.0 36 .................................... AGAATTAAGCACAAAGTATATAAATTATAAAGACAA 178589 36 100.0 35 .................................... ATCCCGAAAATCAAAATTTAGCATTTCCACGCACA 178660 36 100.0 36 .................................... TAATAGGATTATATGTAGGTAATTTACGATAATGAA 178732 36 100.0 36 .................................... TCGAAAGAAATGATTCGAAGCGCAGCGAATGGGGTC 178804 36 100.0 35 .................................... CTGTCGGCATAACTCTGTATATCTCTGTGTAGGCC 178875 36 86.1 0 ......................TT...T.A.....T | ========== ====== ====== ====== ==================================== ==================================== ================== 26 36 99.5 35 CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGCTAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //