Array 1 120136-119311 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FAXG01000063.1 Campylobacter coli isolate H055260517, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    120135	    36	 100.0	    30	....................................	AAATAATCTTTAATAATTTCGGCGTTATCA	
    120069	    36	 100.0	    29	....................................	CTAGCCCCTATCATATAGGGCTTAGAAAG 	
    120004	    36	 100.0	    30	....................................	AGTTTATTTCTTTTTCTTCTAACCATTTAT	
    119938	    36	 100.0	    29	....................................	GCCGACAATTCTACATAACTATCACCAAG 	
    119873	    36	 100.0	    30	....................................	CCCAAGAGAACTTGGGAGACTTATTTTAGG	
    119807	    36	 100.0	    29	....................................	TAAATTGACAAATACTTATGCCTAGCATA 	
    119742	    36	 100.0	    30	....................................	TAAAAGCTTAGTAGAAGTCGGTGCTGATAA	
    119676	    36	 100.0	    30	....................................	CAACGCTAAATCTTTTGTAAATAGGAAAAT	
    119610	    36	 100.0	    30	....................................	TTTTCGTATAAATAAGGTATTAAAAACTCT	
    119544	    36	 100.0	    30	....................................	TGCTTCTTGAGGCGATAAACCTGGAGCAAT	
    119478	    36	 100.0	    30	....................................	GCTTACAGCGAAATTGATTATTCTATAGAG	
    119412	    36	 100.0	    30	....................................	ATAACTGAAATCCCAGTCATCAGGCAATGA	
    119346	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	 100.0	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   TCAATCAAGTCCTAATATTTTTAAATAGAAATAAAATAATGTTAAAATATTTTGTTTCTATATTAAATCAAGGAGAAAAACAATGAAACATTTTATTTTTAGCGGATTAATTGGTTTAGGTGTTTTGGCTTTTTTAGTAGGTTGTGGAGATGAAGCAAAAACAAGCGATTATTATAAAGCGCACTTAGATGAGGCAAAAGCTAGAGTTGCAGAATGTAAAAAAATGGAGAAAATGAATGAAACTCAACAAAGGGATTGCTCTAATGCAAAATGGGCAGTTGAAACAAATGGACTTGAGAATGCGGGTAGTTCTTGGGGTAAATCAAACCCAGACGCTCTTAAATGGAAATAAACTAGCGATTATTTTTTTAATTTTTCTTGCTCCAAATTTAGCTTTTGGGGTTAAAAGTGCGGAAGGCGTTTTAAGCATAATACGCAATGGGCTTTTATCTTGAACGCCCCTTATTAAAACCGCTTGTTTGTAGATATTTTGAATTTTT
# Right flank :  AGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTTGTTTTCTTTGTATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCATACTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGTAACTCCGCCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCAGTTATGGTTAATACTCTTATATTGCCACAAGGGGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTGCAAATTTTAACATATACGCTAAATTGCATCATAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTATT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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