Array 1 1175861-1179252 **** Predicted by CRISPRDetect 2.4 *** >NC_014125.1 Legionella pneumophila 2300/99 Alcoy, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 1175861 28 100.0 32 ............................ TATTAAATTACTAAATACAAGTCCTTTTGATC 1175921 28 100.0 32 ............................ ACCTTATGTTATATTAAATAGTGTAAAGATTT 1175981 28 100.0 32 ............................ TATCTATTTAGATATAGTCTTCTTTCTATATA 1176041 28 100.0 32 ............................ TTAGCTTTGTGTACAAAGTGTGCTAGTGATTA 1176101 28 100.0 32 ............................ TATAAGATGAAAAGTTATTGACAAAATGTACT 1176161 28 100.0 32 ............................ TGTATTTGCTGTTAGTTGCCAGCCACCTGCTC 1176221 28 100.0 32 ............................ TTTTGTTCCTAGCCCAGATCTAGGAATTATTA 1176281 28 100.0 32 ............................ TTGGGAAATGTCTAATACAGTCACTTTTTATG 1176341 28 100.0 32 ............................ CAGTAGACGGCACTAAATGCTATGGATATGCT 1176401 28 100.0 32 ............................ AGTTTGCCGCTTAAAGATGCAAATGAAATGCT 1176461 28 100.0 32 ............................ GTAACTTTCCGTTTACACCAGTTACTTCATAT 1176521 28 100.0 32 ............................ TTTGTAATTGTCTCCACCATGCTTTTTTATCC 1176581 28 100.0 32 ............................ AAAGACACTGCACCATCCCAAGGACAACCTCT 1176641 28 100.0 32 ............................ AAACAACCAGCATATCGTTCTCATCAGCAACT 1176701 28 100.0 32 ............................ AAGCGCAAGCGATCAAGGTCGTTGGTCTCAAA 1176761 28 100.0 32 ............................ AACAGCGGGTGCGACATCAAATTTAATAATAA 1176821 28 100.0 32 ............................ AACTACAGAAATCCGATTGGCTACAACATCAG 1176881 28 100.0 32 ............................ ACTATCTGGTAGAAGGATCGCATTTAACTAAG 1176941 28 100.0 32 ............................ CTTAGCGTATCTACCATTATAATACCTTTTCC 1177001 28 100.0 32 ............................ TGTTTTTAAATCTTTATACTGTAAATTTTGCA 1177061 28 100.0 32 ............................ AAGTTGTGTTTGCTGTAATGCAAATAACTTCA 1177121 28 100.0 32 ............................ ATTAGCACCACTTGCCCCCGCAGTCGATGTAG 1177181 28 100.0 32 ............................ TACAGATAACACTGAATATGAGGCTTACGGAT 1177241 28 100.0 32 ............................ TGACGTTAACAATGAAATTAAAGTCAAAAGTG 1177301 28 100.0 32 ............................ GTGCGACATAGGAGTAAAGTTAAAATCGCAAA 1177361 28 100.0 32 ............................ ACTAAGTTCTATATATCCAAGTCCTTTGCATT 1177421 28 100.0 32 ............................ AAAGATTGCACGTAAATTTAAATTGTTTTCTA 1177481 28 100.0 32 ............................ AAAACACCAGGATTATGAATGTGTCTTTTTAA 1177541 28 100.0 32 ............................ ATAATCTCTGCGAATTGCTTGAGCTAAATCTT 1177601 28 100.0 32 ............................ ATAATTCTCAGTTTCAGTAAGTATACCATATC 1177661 28 100.0 32 ............................ TGAAACACTTTCAAAAGTGGCTTCGTATTCTT 1177721 28 100.0 32 ............................ TGCTTTGAGTCATATTGGAGAGCAAGCTGTTC 1177781 28 100.0 32 ............................ AAATGCCTGCGCTATTTGAGCATTGCGCGCAG 1177841 28 100.0 32 ............................ GTCCAGAAGATAGATTGCTCGTACTCAGCATC 1177901 28 100.0 32 ............................ AAAACGCCATCAATTCAACACCATCACTAATG 1177961 28 100.0 32 ............................ AATGTTCTTTTGAAAAAATTAATTAATAGTCA 1178021 28 100.0 32 ............................ TGTATACTGCATAATGGGGGTATTATTGCACA 1178081 28 100.0 32 ............................ TCAATCTGGGGTACTGACCGGCTCATATCATA 1178141 28 100.0 32 ............................ AGCGTGGGGTAAACAAATATTTGATAGCTTAA 1178201 28 100.0 32 ............................ TCTATATGCTCTCGCTTAATGTCTTTTAATGT 1178261 28 100.0 32 ............................ TTTGAACGATCAAAGGCTCAATCTTGTTTCCC 1178321 28 100.0 32 ............................ ATTCGTCCTTGGTAACGTAGAGTTAATCTATA 1178381 28 100.0 35 ............................ CCAATTAATCACCCTACTAGTACAAATTTTATACT 1178444 28 100.0 32 ............................ TTCTTAGCCCCTAACACTTGCATTTAAAATAT 1178504 28 100.0 32 ............................ TAAAGTGATGATAGGTTCCCAACCATTGCGAG 1178564 28 100.0 32 ............................ TTTTGGGGTAATTAGTGTGTGTTTGCAAATGC 1178624 28 100.0 32 ............................ TAAACGCTGGATCTCTATCCTGTGTTTGATGT 1178684 28 100.0 32 ............................ ATTCGAGGACAATAAATCCCAGTTTAACCCTT 1178744 28 100.0 32 ............................ AAATACAATTGGTATGGTGTTTTGTAGCTAGA 1178804 28 100.0 32 ............................ AGCAGATATCTCATCCCATTCATTATCTGATT 1178864 28 100.0 33 ............................ CAGTACCCGCTACCAAACAAAGTGCCAAACCAT 1178925 28 100.0 32 ............................ ATTTGGAGAAATGGATATCCCCATTTGGTGAC 1178985 28 100.0 32 ............................ AAAACGAATCATTAATGGAATTGCGCATGAAA 1179045 28 100.0 32 ............................ AAACCTAAAATAAGTATATACTGAATTTGAAT 1179105 28 100.0 32 ............................ AGTGATTTAGATAATTCTCAGCTTCCTGTTTT 1179165 28 100.0 32 ............................ TGTACTTATTTCATTTCCTGTAATATGTAATA 1179225 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================== ================== 57 28 100.0 32 GTTAACTGCCGCACAGGCAGCTTAGAAG # Left flank : CAATCAAAAATGAGGCGATTATTTAAACGTGGTTCGATGACAGTGGGTGATATCAGGCAATACAAAGCTAAAATGTTTGCCAAAAGTATTGATAACCCTTATCTTGAATTGGTAAGTGGATCAAATGGGTATAGATATAGGCGCTACATTGAATTTGGTGAGTTACTCGACCAGCCAGTTTATGGAGAATTTGATCGGTTTGGTCTTTCCAAAACAGCCACTGTCCCCTGGTTTGATTAAATAAAAGAATATGAAATCAGTTAAGTTCGAAAGGTTGAAGTGGAAGTTTGTAATTTGTTCAAATACTTGAGTCATTTTTCTAAATAAGATAGAAATAATAGGTAATTTGAATATTTCATACTTCAAATTACCTATTATTTCATCTAATGTTAATTTGTTATTAAAATCAAATGGATATAACTAATTGGGAAAAATTGGGTAAATCAATTTTTTCCAATTATCTCTTTGTTTTATCAGTTTTTTTATGGATGATGTTACAG # Right flank : GAGTCCTTTAGCTTTATGGACAGTCGACAGCATTTCAAAATTCTAGTGTTGAATATACTACTAAATTTAAAGTGATGGGGTTAAACTGTAACAGTTTTAAATTGATATGATATAGATCAATGAGCCTAATTATTACTCAATTTCTATGTAAACAAAAAATGTAACATCTATCACAAGTTGTTCGTAATTTGCATTCTAATAAAAAAAATAGCCATTTTGTATATATGCAATATTTCCATTTTCATTATAGAAACGGCCCCATATGGAGCCTAATAATTGAGAAAAATATAGACAAACCCATTAAAGGATACTGAACAATAATCACTGATAAAAAGATCTCGAGCAAAAGCCTCAAAATCAAAATAGCAGATCAAACAATCCGGCATTTGATGGGCATAACAGTCATCAAATAACTGTCTGGCAAAATCTACCTCTGAATCATAACAACCTAGATAATGATCCTCCAACATGGTTTGGGCATCATCTACCGAATAATCACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCGCACAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //