Array 1 385986-385690 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CABFWF030000014.1 Pseudohizobium endolithicum strain JC140, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    385985	    32	 100.0	    35	................................	ACCGTCTTCGACGGCCAGCACCGGGTCGCGGCTGC	
    385918	    32	  96.9	    35	...............A................	ATATGCCCCGCTGGGCATCCCGCCTGACGCTCACC	
    385851	    32	 100.0	    34	................................	GGCTCCGTCGTGAGGAACGAAAACAGGTCGCAGG 	
    385785	    31	  96.9	    34	...................-............	CACGGCCCAACAGCGCGGGGTGCGCCGGCAATCT 	
    385720	    31	  90.6	     0	.......T...A-...................	|                                  	
==========	======	======	======	================================	===================================	==================
         5	    32	  96.9	    35	GTCGCCTCCCCCGCGGAGGCGTGGATCGAAAC	                                   	       

# Left flank :   GTCAGCTACGACGTGCTGACGCCTTCAGCAGCGCGCGGCATCATCGAGGCGATCCACTGGAAACCGGCGATCCGCTGGGTGATCGACGCCATCCATGTGCTCGAACCGATCCGCTTCCACTCGATCCGCCGCAACGAGGTGGGCGGCAAGGCTCCGGCCGGCAAGATCAGGAGCGCCATGAAGCGCGGTGACCTGCAGGACCTGCAACTGGTCGTGGACGAAGACCGCCAGCAGCGCGCCTCGACCGTGCTCGCCAAGCCTGCCTATGTGATCTGCGCGCATTTCGAGATGACCGCCAAGGCTGGGCCTGGCGACAACGAGGGCAAGCATCTCGACACCTTCAACCGCCGCGCCGCCCGTGGCCAGTGTTTCCATCAGCCCTGCCTCGGCACCCGAGAATTCGCGGCCGATTTCGAACTCCTGCCACCAGATGCGCCCATGCCTGAACCGAAGGAGGAGGCAAGGACGGCCGATCTACGTCGGCATGACGTGCCCCGGCT
# Right flank :  GAGCAAGTCGCGTTCGGAAGGTCGTCGATCTTGCGGTGCGCGCCCGGCCTTCCGGGAATGCGCCTCAGAAAGGCGCCGCACAGCGGCCGCGTATGACACGGATCGGCAATTCAACGTCCTGATATTAACCCTTGGTTAAGCACATCGGCGCCTAAAGTCGTATTCAAGCGGGTTCTTGTATTGATTTGCCGCGTCATTCCCCAAGGTTGACGAACAAGGATCGTATCGTGTCGGCAGCGAGAACCTTCATGTTGCACATTTGCATGGGACTGGTGGTTTCCTCTGCCGCCACCGGATGTAACTCCACCGGTACCGTCACGCGCCCTGTGGCTCCCTCGCTCGTGTCGGATGAACAAGCTCTCGCGCTCCCCCCTCCGGGCGGGCCGGCAATCGTCGGTGTGGTGGAGCGGCCGCGCCGCAATGGTGTGGAGCAGACAATCTCCCTGGCCACCACGGCGCGTGTTCCGGGGCAGAACTATCTAAGGATCGAGTTCTTCGGC

# Questionable array : NO	 Score: 5.83
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCTCCCCCGCGGAGGCGTGGATCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.20,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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