Array 1 1484922-1485540 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNJ020000001.1 Clostridium sp. FP1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1484922 30 100.0 34 .............................. CCGATTCCAAAACTTACATTTGAAATTCTTTGGC 1484986 30 100.0 36 .............................. TATTTTGCTTGAAATGTTGCATCAATTGGTATTCTT 1485052 30 100.0 35 .............................. AGTGCTGATGAAATACTCCAAGCTTTCAGAGGGAC 1485117 30 100.0 35 .............................. GTTTCTACCTTTTCTTTTGTTTCTGAATCTGAAAA 1485182 30 100.0 35 .............................. TTTCTTGTTTAAGTTCTTTAGATAATTTTTCTACT 1485247 30 100.0 35 .............................. GTATCTTCAACTTTAAAATCTTTAACTTTACCTTC 1485312 30 96.7 35 .......T...................... CAAAGCCTTTTAGGTCATGCCCAAAGTTCTACAAC 1485377 30 96.7 37 ...............A.............. GTCATTTTTATATATTCATTCATCATTTCCACAACTT 1485444 30 100.0 36 .............................. AAGCACTCTAAAATAAGATTGTAACTATAACCTTCC 1485510 30 86.7 0 ................T...C..AA..... | G [1485537] ========== ====== ====== ====== ============================== ===================================== ================== 10 30 98.0 35 GTTGAACCTTAACATGGGATGTATTTAAAC # Left flank : GACGCTTGTGCAGTGGATAAAATATTAAATAAATTCAAACCCTGTATTATAAAAAATAGTATTATAAATGGTAAATTTGATGAGGATTGTTTTCAGGAGTTAAATTTGAATTTAATAAAATGTATTTATAAATTCACATCTAACTCCATTGATGTAAATTTGAAAAGTTATTTAATTTCTTAAGCCTCAAATATTTGGCGCTGCCCATGAAGTGATTATTTTTGAAGTTTTCATTGAAGGAATATAGAGTTGGAAAAACAGATGTTTTTTTGTGAATATAGAAAATATAAAGTCTTACAATATTATAATTTTGAGAAACTAAGAATTCCCCAACCGTTTAAAAACAAATGCTAACCTTAAATCCAATAGGAACAATACTTTAAGTTAGTAATTATATAGAATTTCTGATTTTTTTAAACGGCTGGTAAAATCTCCTTGAAATATTGATATTTCAACCGCTTAGTGGTATTATAATTTTAGAGAATGGCTTAATTGCATTG # Right flank : CTATTAAAACAGCAAGAGTTAGTAGAGTAAACAAATTACTTTATTAGCTCTTATTCTATTCAAATGAAAATATTGGAATATATAAAGACATAAATGGATTATATGGTACAATATACATAATAGGTTTTGTAAAGATGTACATGTATGAATTTTGTAGAAGTAATATTCACCTGACAGTAGTAACAAAATAAATTTATTAGTGTTTTGAAAATATAAAGGAATAAAGTTACTAAGGTATAAGGGTATGTTAGTTCAGAATAATGAGGACTCGCAAGAACTAGTTTTTCAGCTATAGCTGATGTTATAGGGTTGGTAGTGTAAGATAAGATGTTTTATGAAAGGTGATATAGATGATTAATTGGGATGGCATAAACAAATTCTCATGTGTTGTGACGATAGGAACACCAATAGTTACATTTTTTTTAGGAATGAAATTTAGTAAATTCAAAAGGTGGATTGATTTTAAAAAAATAAGAAAAAATGTATCTCAAAATTCAGGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGGGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 1496215-1497035 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNJ020000001.1 Clostridium sp. FP1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================= ================== 1496215 30 100.0 36 .............................. ACTCGGCCTAATAACCTAGCTTGTATTATTTCTGCA 1496281 30 100.0 36 .............................. AAAAAATACATATAGATTGTAAATACATTTCATGCA 1496347 30 100.0 36 .............................. GACTTTCCATCTAATCTTCCCTGTCTAACAATTATC 1496413 30 96.7 34 .......G...................... TTTTATCTTGCGAGTGGTCTTTATCTGATTTGAA 1496477 30 100.0 105 .............................. TAGATAAAGATTTGTACTTATATAGGAAACAGCTTGCGGAAGTGGCTGTGGATAACGGTTATACTCGACCGTAGGGAGATTTTGTTCCTTGTGTTAATTTCTGTT 1496612 30 100.0 36 .............................. TAATAATAATTCCTCCTTGTATTTTAAGTCCTGTGG 1496678 30 100.0 35 .............................. TCACAGTTAGAATTTCAGAAGGTCAATAGATACAT 1496743 30 100.0 36 .............................. ATTCGCCTTTAATATTAGTGTAAGAAGTTTCTTTTC 1496809 30 100.0 35 .............................. ACTTTTGAAGCTAATTGTGGCTTTTGTGTAAATCC 1496874 30 100.0 36 .............................. AATCAATGGTCGTCTGCATTTCTTGTCTATCATTAT 1496940 30 100.0 35 .............................. AGAAGTTAAAAGCATGGGTGCAAAGGTCTTTAAAA 1497005 29 90.0 0 ..................T..-.......T | T,T [1497022,1497033] ========== ====== ====== ====== ============================== ========================================================================================================= ================== 12 30 98.9 42 GTTGAACCTTAACATGGGATGTATTTAAAC # Left flank : AACAAAATGGATATTGAAGTTATTAAAAATAGCATTAATGGCAATCTTTTAAAAAAACTAAAAATGATCAATGGGATTGATTGTGTATTAGAGCATGATATGATTAAAACAATAGAAGTTAAAAACAATAAGCCTATTGCATTCAAATATAAAAACAACAAATTACTTGGAAATAAATTTGAAATTAAAATTAAGGAAGATGAATTATCTCAAACAATGGCATATGTTGCTATGGCTACAGGCTTACTTGAAAAAAATTCGTTAGGATATGGATATTGTCTTTGCAAAAACAGATAATAGTATAAACTTAAGAAACTAAAAATTTCCCAACCGTTTCAAAATAAAAAGCAGCCTTAAAGCCAATAGATTCAATGCTTTAAGGCTGTTTCTTTATATGAAGTTTCTAATTTTCGAAAATCACTGGTAAATTTTCTATAAAAGTTTGATATTCCAAGTGTTTAGTGGTATTATTGATTTTAGAGAATGGCTTAATTGCGTTG # Right flank : TGAATATTGCCCCCCTCACTTAAATATAATATTCATTATGTGTAACTAAAATAATGTACACATGAAAGTGGCAGCAGATAGGGGTTGAAATAAACTACGTTTAGCACATTTTACAGTGAAAATTTTCTAAATGTAGTATGCAGTAGCTAGTATTTCTTAAACCTGAATTATTGAAATCTTTTTTAGGATATAAGATAAGACAGAATAATAAAGCATGTTATTAATAAATATATTTATAATGAGAATTGAAGATTTTAAAATTTAATAATATGACAGATGAATGGTTAGACTTTGTTGTTTCATGTAGGAGAGGAATTATATAGAAGACTATATAGATGGAATAATAACTAGGGAAGCCTTTTGGGTGTTAGTAAAATTTAAATATCCAACACATCAAATAGTTTTTTGTAATGGTAAATCATTAGAGGATTTAAAATATCAAGGAGCTTATTCATTATGATAAATCTATTTTTTGAAGATGAGGAAATCAAGGAAGATGA # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.56, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGGGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 1636360-1638750 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNJ020000001.1 Clostridium sp. FP1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1636360 30 100.0 36 .............................. CTAAATGGTTGCAAAAAAGATTAGCGTTACCAACTA 1636426 30 100.0 37 .............................. CCAGCAAGAACATTTTGCATCTTTCCACGTTCCATGG 1636493 30 100.0 37 .............................. TCTGCTATAAAGTCATTACTTTCTCCGTTAACGAAAG 1636560 30 100.0 36 .............................. AAAACGAAAGCCATTTAGAAGATGCTAAAGAGTTCT 1636626 30 100.0 34 .............................. CCACATGCCATTTGTTTTAATTGTTCTAAATTTG 1636690 30 100.0 35 .............................. TAATCACCTGTCAGCTTTACAATGCTACTCGGTAG 1636755 30 100.0 36 .............................. GCTTCATATATCTTTCCATCTCTGCCTTGGCATAAA 1636821 30 100.0 35 .............................. GAAATTGATTCCATTGCTTTCGACCCACTCTTGCC 1636886 30 100.0 36 .............................. ATGCTTATGAGGGATTATAAGAATTTAACAGGTAAT 1636952 30 100.0 36 .............................. CAAACATAACAAGTTATTTCATGTTCTCCGGGTTCA 1637018 30 100.0 39 .............................. CAACATTAAGATGCAGAGTTAAAAGAGGTTGGAGCGTAG 1637087 30 100.0 36 .............................. ACGGAGAAAGTACATTTAGTGATTGTGAAATAGCAT 1637153 30 100.0 36 .............................. AATCTTACTGCATCTCCTGGTGCAACTGCTGCACTT 1637219 30 100.0 34 .............................. CCGCTGCTTCCTACTGTACTAAAATCATATGCGG 1637283 30 100.0 36 .............................. AATTGACAACTAATACATTGAACATATAAATTATAA 1637349 30 100.0 36 .............................. TGTTCTCGCAACTCTCTTCAAGCTCTGCTACTCTTT 1637415 30 100.0 34 .............................. GCGTTTTTGATTATGTGAAATGGATATTCGGGGA 1637479 30 100.0 37 .............................. TGGGTATGACCAGGACAATAGATGGGGTCCTGATTAT 1637546 30 100.0 36 .............................. GGGTACGCCCCTATCTTTCTAAATATTTGTACCTTT 1637612 30 100.0 36 .............................. ACGATTTTACCACCCTTGACTATTTCTCCTGTTATT 1637678 30 100.0 34 .............................. AAATATACTTTTATTTTTGTATAATTGTCAAAAG 1637742 30 100.0 35 .............................. TTGTTAAATTTCCCCCTCTATAAACCATTTACCGT 1637807 30 100.0 36 .............................. AAAAGTAAACTACTGTTTAGCATTTCAACTTTGGTA 1637873 30 100.0 37 .............................. AAAATTGATTGTTGTAAAGATTTAATTTCAGATAATT 1637940 30 100.0 36 .............................. CTAAAGGCCATACAATATCTAGCTAAAAATGTTATG 1638006 30 100.0 35 .............................. CAGTAGGCTTGTACACCATCCCCATCCAAGAAAGG 1638071 30 100.0 36 .............................. TTAGGAGTAAGATTGTGTCCTTTTTTCTTTAAGATT 1638137 30 100.0 35 .............................. AGCGCAAGGACAACTCGTGACATGGACACTTATGT 1638202 30 100.0 34 .............................. TCACCAGTTCTTTCTTTTAACAGCCAATAAGCAT 1638266 30 100.0 35 .............................. CCTGTAGCTGACAACCAAACCATTGTGCCACTATT 1638331 30 100.0 35 .............................. AGCGCATCTATTTGTGATTGTAAAGCTTTAATCTT 1638396 30 100.0 35 .............................. AGCCAAGGTTGTTCCCTTTTAAAGTAATTAATAGT 1638461 30 100.0 36 .............................. TGTGATAATCCTATTTTGTGTTTTTTATTTAGTGCT 1638527 30 100.0 34 .............................. AATTTCTTGCCAGTTGCACCAGTTAATCTTGCAA 1638591 30 100.0 34 .............................. TACATTAGGTACTGGGGCAAGTTCGGAAGTATTA 1638655 30 100.0 36 .............................. ACCCATGTTTCTTCACCAGTTTTATTTTTAAATCCG 1638721 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 37 30 100.0 36 GTTGAACCTTAACATTAGATGTATTTAAAT # Left flank : AGCCCATTTAGATTGAAGGAGATGAAGTAATATGGGGAAAACAACTAATTACAATTATGCTTTTGTTTTTTATGATATAAAAGAAAAACGAGTAAATCGTGTGTTTAAAGTTTGTAAAAAGTATTTTAAACATCATCAAAAATCCATTTTTAGAGGTGAAATAACCCAATCTAATTTAATAAAGTTGCGTGCTGATTTAAAAAAAGTAATAGATGAAACAGAGGATTTTATTTCTATTATAAAAGTAATGAATGAACAAAGCTTTGGAGAAGAAACCATTGGAGTGAATTTTAAAGATAGTGAAGCTCTAATTTTGTAATAGTTTTTTACCAACCTAATTTCATTTTTAAAGGCTGAAACCTATTGAAAAACAAAGCTTGCATATACTTATTAAATAAAGTTATAATTATAGATGAAACGGCTGGTAAAAAAACATGTAGACTAGCCATTATAATCGATTAAGAGCTTTTAAGTATAATAACAATGGCTAACTTACAGTA # Right flank : TACTGCAGGACTTGTTTCAGGTAGTAAGCGATGGAACAAACACCGTCATGCAAGTTAACCTCCCTTTTGATATACTTTAATAAAGTAATCGAGGGGAGGTTTTATTTTGAGATCCACAACTAAAGATCAGCTTCTCTGGGAGCAAAGAATTAATGAAAGAACTAAAAGCGGAATGTCAGTTTCAGAATGGTGTAAAAACAATGAAATTAGCAAAAGTAAATATCATTATTGGAATCATAAATTAACTAAAAACCAAAAGTCGGATAACGAAATGTCATTTGCCGAAATCACCCCAATCCTTTCAACTGCCGATGAGGCAATACTAAATTCAGATAAATCGAATGATTTTCAGATATTTTTCAAGGGTATACAGGTAACAGTTCCAAGCAATTTCAATCAAACTTCTTTAGCAGGACTAATGAAAGTTCTGCAGGAATTATGATACATCATATAGCCGATGAGGCTGAACACATCTATATTGCTCTTGGCGCAACAGATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATTAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //