Array 1 41386-43274 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXEU01000002.1 Lacticaseibacillus rhamnosus strain B1 scaffold2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 41386 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 41453 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 41519 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 41585 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 41651 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 41717 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 41783 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 41849 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 41915 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 41981 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 42047 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 42113 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 42179 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 42245 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 42313 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 42379 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 42445 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 42511 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 42577 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 42643 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 42709 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 42775 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 42841 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 42907 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 42973 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 43039 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 43105 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 43171 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 43237 36 86.1 0 .......................AA.C....T...G | C,G [43263,43269] ========== ====== ====== ====== ==================================== ================================ ================== 29 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : GACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //