Array 1 387007-386782 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMS010000001.1 Myxococcus sp. CA051A NODE_1_length_1373247_cov_21.6895, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 387006 24 100.0 42 ........................ GCCAAGCCCGCGGAAGCCGAGGGCGCCGAGCCCGCCGCCCCG 386940 24 95.8 45 ....................G... CCGAAGCCGGAGGCTCCTCCGCCCGGCGCCGAAGCCCCCGCGCCC 386871 24 100.0 42 ........................ GCCAAGCCGCCCGAGGCGGAGGGCGCCGAACCCGCCGCTCCC 386805 24 95.8 0 ........T............... | ========== ====== ====== ====== ======================== ============================================= ================== 4 24 97.9 43 AAGAAGCGCGGCCGTCCGCCCAAG # Left flank : ACGTGAAGAGCGTCTTCGCCTTCCTGCGCTCGGACGGTGACAAGGCCGACCTGGACTGGAAGCAGCGCGCTCGCACCAACCTGGACCGGATGACCCAGGGCGGCATCCTGGGACTGGCCGAAGTCGTGAAGGATCTCCAGATCCTCAGCGAGCTGCGGCCCCTGCCCACCAAGGAGCGCGAGCTGTACGACAACGCCCGGCACCTGCTGGTGTCGGAGGTCGCCGCCGCGCTCGGGACCGCCGAGGTCAACGCCGAGGACGCCATCGACATCGTCCTCTTCCCGCCCGGCCGCGAGCGCCCCAAGCGCACCGCCGCCGAGTTCGCGCGCGGAGAAGAAGACGACCTGGGTCTGGATGGCGACCTGCTGGGGCTCGACGGAGACCTGGACCTGCCCTCCGACGAGGAGCCGCAGGCCGAGGCCTCCGAGTCCGAGGAAGAGACCTCCTCCGAGGAAGAGGGCGAGGAGTCCGAGGAGAAGTCCTCCGACGAAGACGCGCCC # Right flank : GCGAAGCCCGCCGAGGGCGGCGAGGACTGACAGTCGACACCCGAGTCCCGGGGGCGGTGCTCATGGCCCCCTCCCGAGGGCCCTTTGCGCCGAGGTGACGCCCCGTGATTCGCGTCGTGACGCTGGACCCCTTCGACGACAAGCAGCTCGCCAAGCTCAACCGCACGCTCTACACGGCGTTCGGCGTGGGCAGCGAGCACTCCGGCACCGCGGAGATTCCTCCCGGGCTCGGCGAGCCGCTCGACGCCGAGAAGCTGCTGGACCAGGTGAAGGGCATTCGCGCCTACCAGGATGACAAGGTGCTGCTGCTCACCTCGCGCAAGCTGAAGGAGCGTGAGCTGCCCAGCGGCGTGGCGCCCACCCCGGGCTTCGCGCGCCAGGGCAAGGACCGCGCCGTCATCACCCTGCTGCCCCACAAGGATTTGGAGGTCGGCTTCAAGCCCGTGGCCCGCCACGCGCTCCACCAGCTCGGCCACCTCTGGGAGCTGCACCACTGCCTG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGAAGCGCGGCCGTCCGCCCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 307072-311184 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMS010000002.1 Myxococcus sp. CA051A NODE_2_length_1176142_cov_23.5874, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 307072 37 91.9 35 ...C......A....T..................... ATTTCGCCAGCCAAGTCAGGGCACCAGCAGCCCCG 307144 37 91.9 32 ..T............A......G.............. TTGACCGTGCCATCCTTGTTGCCGAGGTAGTC 307213 37 97.3 32 ...........A......................... TTCGGCCCTGAGTCGTACGGGGACGTGGACTC 307282 37 97.3 35 ....................................A ATCCTGGAGGGCGAGGACTACACCGCTCAGATCGA 307354 37 94.6 33 .........................C....C...... ACCACCATGGTCCACGGCCAGGTTGTGGCGGAG 307424 37 89.2 18 ................A.................CGT ACTGGGATCAACGTCCCA G [307455] Deletion [307479] 307480 37 100.0 34 ..................................... TTGATGTCATCCGCGCCACCGACGACGTCCGGCG 307551 37 100.0 35 ..................................... GGGAACCCGGCGCCATACATCCACGACAGGGTGTC 307623 37 97.3 34 ......................G.............. TGGAGCACCACGTTCTGCACGCCCTCCACCGCGG 307694 37 97.3 34 ..............................C...... CGCTCTCGTGGCATCAACATCCACGAGTGGACCA 307765 37 100.0 32 ..................................... AGGGGCGACCCCAGCGAGATGAAGGACGGCAA 307834 37 100.0 33 ..................................... TGGGGCTCGCGCTACATCCGCTCCGGCCGTCTG 307904 37 100.0 36 ..................................... AGCGTTTCCATGCTGACGCCCAAGGGGGCAGCCCTG 307977 37 100.0 34 ..................................... GCCAGCGACATCCAGAATCTCAAGGCCGAGGTCA 308048 37 100.0 32 ..................................... CTTCAGTCAGTGGATGGGTGCGACGCCCAATG 308117 37 97.3 35 ...............G..................... CAGGCGCCCAGCTCGCGGGAGATAGGCGCGGGGAA 308189 37 100.0 33 ..................................... AAGACCAACACGAACGCGTCCGGTGGAACCATC 308259 37 100.0 34 ..................................... AGCTCGCGAGATGGCTTCCTCGCTCACCAAGCTG 308330 37 100.0 33 ..................................... GATTCGAACGCGAAGGTGAAGTCATACTCGGTC 308400 37 100.0 35 ..................................... GGTCGGTTCGTTGTGCACGACACGGGAACCGGAAC 308472 37 100.0 31 ..................................... GCTGGAGGCGAAGGCCAAGACGGCCGAAGTC 308540 37 100.0 33 ..................................... GTCAGGTGCTGGATGATGAGCATGGGGCCGGAC 308610 37 100.0 32 ..................................... GACTCCGGCTGGAAACGCTCGCTGGCGCTCAT 308679 37 97.3 36 .......................T............. CGTTCCGGTAGTGGCGCACCTCCGACGAGTCCAGCA 308752 37 97.3 33 ................A.................... GAGTGAATCGCCCGAAGGCATCGGCCACGGTGG 308822 37 100.0 34 ..................................... TCGGTGATGTACTCGTACGCGACCGTGTCGGCGC 308893 37 97.3 32 ..............................G...... TTGTGGGCCGGAGCGTCGAGACTCCTGTCGCT 308962 37 100.0 33 ..................................... ACCCAACGAGAGTGGCTCGTCAACGCGCCGGCC 309032 37 100.0 32 ..................................... GGAAGGGTGAGGTGGCCGGGCTGCTCTGGGCG 309101 37 97.3 33 ....................................A ATCGTGGACACGGGGACGAAGAGCCCCGGGCCC 309171 37 100.0 33 ..................................... TCCGCGCGATTGATGGCGAGAACCTGGGCCTTG 309241 37 97.3 34 ..........................C.......... GCGTTCCCTCCGGAGTCCCTGTCGTTGGCGTCCG 309312 37 100.0 32 ..................................... CCACCTGGTGTGTGTGTCCGTACTTGTTTTGC 309381 37 100.0 32 ..................................... GCGAAGGATGGCCAGTACATCCGCCGGCGCCT 309450 37 100.0 35 ..................................... ATGGTCCACTGGCCATCGGGCCCCTGGGACCACGA 309522 37 100.0 33 ..................................... GCGGCCTCGTCCTTGACCCGCTGGTTGGCGCGC 309592 37 100.0 33 ..................................... AAAAAGGGGCTCCAGCAGTTCGACCGCGATGCG 309662 37 100.0 36 ..................................... AGGTCGCCCAGTGGCATCCCGACGGACAGAGGGCTC 309735 37 97.3 34 ....T................................ CTCGCGGAGGCCATCCGCGCCCTGCCGTTGGAGT 309806 37 97.3 32 ....T................................ GGCATCGTGTCGTCGTCCGAGTTTCGGTTGAG 309875 37 94.6 36 ....T.................G.............. AAGGTGTTGTCAGAGGGGCGGGGCCCAGGGCGGGAA 309948 37 91.9 33 ....T..T................A............ TCCTACCTGACGCCGGACCTCTCTGCCGTGGAA 310018 37 97.3 35 ....T................................ AAGGGCATCTATCTGGATGGCGTTCCCGTTCAGAA 310090 37 97.3 33 ....T................................ GACCGAAGAGGGGCCCTCACGCGTCATGGTCGA 310160 37 94.6 32 ....T.........................G...... GCCACGGCCTACCCCCGCCTCGCGAGAGCAAC 310229 37 94.6 33 ....T.........T...................... GAATTCTGGGCGCAGGAGGCCAGCCCCGAGGTG 310299 37 97.3 34 ....T................................ GCTCTCATGGCATGCACGCCCGACGGCACGCGGG 310370 37 100.0 35 ..................................... ATCGTCTGGACGGACGCCCAGCCGTCAGCGGCTGA 310442 37 100.0 34 ..................................... GGCTTCCGCCTTAGCCACGAGCCGGGCTGACTCC 310513 37 100.0 33 ..................................... CAATTCGAGCTCGGTGACAAGTTCTCCGCCCCG 310583 37 100.0 33 ..................................... GCGGGTTCGGTGTACGCGGAGCCTTTGCGTGCC 310653 37 100.0 34 ..................................... GGCGGCTGGCGCATCACCGTGTCTGCGGCCGACG 310724 37 100.0 34 ..................................... TTGATGGTTTGCCGCGCCTCCACCGGTCCCGCAT 310795 37 100.0 31 ..................................... AGAAGGGCGCCTGGGATGCTCAGATGGTCGA 310863 37 100.0 34 ..................................... GAGCAGTAGCTGCCGGACTCCAGGAGGCCGGCCA 310934 37 97.3 35 ...............T..................... ATCGACGACGTGAAGCCGCAGATGAGCATCCTCTT 311006 37 97.3 33 ........................T............ AGCGTCTCTGGGGACTCCACCGGCGAGCGCTGA 311076 37 97.3 35 ......T.............................. AACATCTGGATGCAGGCGGAGACCTTGCGTGGGAA 311148 37 83.8 0 .C............T.T.A......C......A.... | ========== ====== ====== ====== ===================================== ==================================== ================== 59 37 97.9 33 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : TCTTCAAGCACGGCTCTGAGCTGGGAAATGCGCCCGCGCATGCCCTGTTTGGCCGCGTCCGTGCAGACGCTGTGTCGCCGGAGAAGACCGCTCGGGCGTTCACGGACTACACGGTGACGGTGGACACGGCGAAGCTGCCTGAGGGCATCGAGGTGATGGACCTGGCAGGATGAGCGACGCCCGCGAGACCTGGGGGCGCGGTCTGCCTTTCGGCACCCGCGGTACTGCGAACGGAAGGCCGCGCTCATCCATGTCGAGCGGCGTTGGCGGGAGGATGTGAACACCGACCTGTGCTGGCTGCTCGCGGCTGCGTATCGCGGGCCGCACGGACCTGTGCTGGTGTCGGATCCGTCGGAGTTTGCGCTCTTTGAAATTCCCAATAGTCGTCAGAGGTTGCGCGGGGCGCTGGATGAGGACCGTGGACGGATTGAGTCGTATGGAACTAGATTCGAGCGAAACGGCCGAAGTCCCGCAGCGTGACGGGGGCGGTTGGAGGCGGG # Right flank : CACCGTGGCGAACGGCGCGTCGTCCAGATGCTCCAACTCGTGGTGTCGGTCCGGGTACCCTTCGGCCAGCACCTTCACCGTGTATGTCCCATGGGGCAAGGGTTCGAATACGAAGCGACCTTGCTCATCCACGAGGGCCCGCACTTCGCCCGGCCCCGCCGGGCTGACCTTGTCCACGGCGCCCGGATGGGCTTGGCCCTCCTTGTTCCTCGCCGTGCCGTTGAACGGGCCGAGGGAGTGGAACTCGATGTGGACCCCGGTCTCCGGGAACTCTTCTTCCAGCGTCACACTCGCGCTGCCTCGTTTGCGCGAGGTGCTCGCCGCTCACCCGGGGCCATGCCCTTGCCTCAGGAGTCCGTCCGCCTCCGCCCTCATCTTCCTGAGGATTCGAGAGGTGGCCGGACTCCCGTGGCCTGCTCCGGTTGGAATCGTCCCGCTGGTCAGAGATTGGCGGCGAGCATATCGAGCAGCGCGCGGACCTCGAGCTGTGCCGTGCAGTC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [18-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //