Array 1 224060-226411 **** Predicted by CRISPRDetect 2.4 *** >NC_014408.1 Methanothermobacter marburgensis str. Marburg, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 224060 30 100.0 36 .............................. GAAGAAAACGTTGAGGCTCCTGGAGCTGCTGACGCG 224126 30 100.0 36 .............................. TCACAGAGTTCACACCACAAAACGAGAAAGTCAGAA 224192 30 100.0 38 .............................. CACTCTCAACTGCGGATGCGGAGTCACCTATCAAATGA 224260 30 100.0 36 .............................. TTTTTGGGGGTGGGGGTGGTGTCCCCCCTAGATTAG 224326 30 100.0 36 .............................. GAATGATTCATTCGTCCGGTAGAAGTAGATGAAAGC 224392 30 100.0 37 .............................. GGTTTCATGTTTCCGCTGAGAACGAGGAAATTCGCGT 224459 30 100.0 34 .............................. TCTATGAATCTTTCACGCACCCACATGTGACCGA 224523 30 100.0 36 .............................. TGGATTTCCTTGTATCTTCTGAAGATTTCATCGTAT 224589 30 100.0 37 .............................. ACAATCAGCAGGCACCCTTGCATGGATCAAAGCACTC 224656 30 100.0 40 .............................. TCAAGATGGTCTGTAATGACTCCTCCGCCTCCCATAATGA 224726 30 100.0 37 .............................. AAACTACCCCTCACCGACCCAAAACAGATCACACCAG 224793 30 100.0 36 .............................. TGGTCGGATCAGCAACCATAACAAGCCCTTTCTTAA 224859 30 100.0 36 .............................. CTTCCATACCAGCATGTAGTATATTACCCACACCAG 224925 30 100.0 36 .............................. CGAGGTAGTCAGAGGGATAGATGAGGACCTATACAG 224991 30 100.0 35 .............................. TGGAGGAACCCGTAGAGATAGAACTCGAGGACTGG 225056 30 100.0 37 .............................. AGACAGGAACGCGGAGAAAATCATCCGCGTCCAGAGC 225123 30 100.0 37 .............................. TGAGAATGACTTCCAGGACAAAAGCATCCAGGCACTT 225190 30 100.0 38 .............................. TGTCATGGTGTTTTGGATGATTGCGCCCGGTTTCTGTT 225258 30 100.0 38 .............................. TCTTCGATTAGGCTGGCTTTGAGTTCATTGTTTTCTGT 225326 30 100.0 36 .............................. TTTCTTCACAAGGACACTCGCCAGCCGCATACTAGA 225392 30 100.0 36 .............................. TGTACAGGTTTCCGTCCTGGTCTTCGTAGAAGTGGA 225458 30 100.0 36 .............................. TCTTTCCCTTGGATCTCCGCATCTCTGCGGAGATCT 225524 30 100.0 36 .............................. CAGCAAAAGCAGAAGGAATCTACAACCCAGTTGCAA 225590 30 100.0 38 .............................. ACTCAAAGTGATTACTCTATCTCTCTGAATTGTAATGA 225658 30 100.0 37 .............................. GAATAGGGTCTTTTGATATAGTCCACCATAGTGTTTC 225725 30 100.0 35 .............................. AAGTCTACAAAGACACAGACAAAACCAACAAATAT 225790 30 100.0 38 .............................. CCCCGTGGCCTGGTTGTACTCGTATTGTGTTTCGAATG 225858 30 100.0 35 .............................. GAGGATCGTGCAGATTTCGTGAGAGAAGGTATTCA 225923 30 100.0 34 .............................. CAGGGCAGAAGGTTAAGATAACCCCCCATCTTAG 225987 30 100.0 38 .............................. GAGCAGGTAATCTGCTGGTAGGAACTGTGTCTTGTTCA 226055 30 100.0 32 .............................. GATAGTTCCAGGGCGTTTTCGAGTTTCCTTTT 226117 30 100.0 35 .............................. TTGTGAGTTCGCGGGCTAATTCTAGGGGTGGTTTC 226182 30 100.0 37 .............................. TCATCTATGATCACATCTAATTGGTGCTGCCTGAGTG 226249 30 100.0 36 .............................. CAAAAATAAGAAAACAAGGAAGCTACTACTATGTAG 226315 30 100.0 37 .............................. CATATACCAGCTGATTATTAAGGGGGCAAGGTATTAT 226382 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 36 30 100.0 37 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : AGGCTGTTAATGATCCATATAATTGCTTAAATTTTGTTTTTTTAGATTATAAAGATTTAAAGGATTTTGATTCAATAATTGAAATTCCGATAAACTCTTTGAAATCATAAAATATTTTTAATGATTCTAATGATCATATATCACGCTAAAAATTATTTTTAAAAATTTTAATCCAATTAAATTATTTTTTGAGACCATTAAAGGGATATCCTCCAGAAGTTTTTGACCATTTTCCAGCCAGCATTTTATAATAACCCTATGTTATTTTAAGCTTATTTTATAATTAAAATGTCTCATAGTTCATTTTTAACTTTTTATCTCGCTAAAATTCTGATTTTCATTTTTTAAATTATTCATGATCTTTATTTTTTAATTATAAATCCCAACAGCAAGTCGTCTGTCAATATAAATGAACTGCATTATTGGGGATCGACAAATTTATAAGTCTGAGAGAAGAAACCTTAGAGTGATATAGGTCAAATAGAGAAAAAATCCGCCCT # Right flank : TGCTTATTTATTGTGAATTTTCAAAAAAAACGTCCTTTGAATTAAAAATGTGTATAAATTCGTTTAAAAAAATTTAGAGAGGTTAATGGTACTGAACCTGTTCCTCAACGCCACCCTTTGGTTTTATTTTTTCCATGGCCTCAAGGAAGTGTTTCATCGGGACATCCTCCGCGTCCATGTTCTCTCTGAGTGTCAGCATGGCGGCCTCCCTGCAGACGGCTTCAATGTCGGCACCAACGTATCCTTCTGTCTTATCCGCCAGTTTTTCAAGGTTCACGTCATCTGCAAGCGGCATATCCTTGGTGTGCACCTTGAATATGGCGAGCCTTGCCTCCCTGTCTGGATCGTCGACCTTCACGTGTCTGTCGAATCTTCCAGGTCGGAGGAGCGCAGGGTCCAGGATGTCTGGCCTGTTGGTTGCGGCTATCACAGCAACGTCCTGTAGCTCCTCAAGTCCATCGATCTCTGTGAGGAGCTGGTTCACGACACGCTGGGTCACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 2 1634338-1634566 **** Predicted by CRISPRDetect 2.4 *** >NC_014408.1 Methanothermobacter marburgensis str. Marburg, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================= ================== 1634338 23 87.5 26 .....T.C............-... AACATAACAGCAGCCAAATCCTGGAT 1634387 24 100.0 27 ........................ TTACAATATCCAACATTTCAGGAATCA 1634438 24 100.0 27 ........................ ATTCACGACTGAGTGGACAAATAAGTG 1634489 24 91.7 29 ............C.......C... TTCACATCCAGCAGACTGCCGGGGAAAAT T [1634511] 1634543 24 95.8 0 ......................A. | ========== ====== ====== ====== ======================== ============================= ================== 5 24 95.0 28 TTACACTTGAAATGCATGTCTCCC # Left flank : GAACAGTTATCTTGTAACCTCTGAAATATTTTCCGATGGCCTCTCAAAGGACAGATTGATTTCAAGTATAAAAAATGTTTTCAGGGCTAAACTTCATGTCATGTGGATGATACAGGAACGTTTCGGCGATGATAAACCTGAACACGACAGCATGTATGTGTGAGGTTCATTTCCAGTGAAAACATCTATGAAGTGCTTCTGAGCATCTGGGAGAGATGGATTTCAACTGTAAATTGTTTTTTGTGTCATGAATCTGGTTTGAGGGACGTCTATTTCAAGTGTAAATCTGTTCCAGTACATTATGGGGCATGGGTGAGAGGTGCATTTCAACTGTAATTTGTGTACAATACTGAGGGAGAGGTGAGGGAGAGGTATATTTCAAGTGAAATCTTTATTACAATATTAAACTTTGAAATTAAAATGCGACATTGATTTCAACTGTAAATGTATTAGATGTTTCCTGGTCAGATTCGCTTGGGAGATCCTATCTTCACATTTAA # Right flank : TGTCATTATTATGAAACGGATTGATATTAATAAAAACTTTTATCTAAGAGTTAGAATAAGAAAATTTACACTTGAAACTTATCACCCTGTTTATAGGGTGATCTAAAGGGGCACTGCCAGTATTAAAAG # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.13, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTACACTTGAAATGCATGTCTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //