Array 1 626625-627613 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVAM010000001.1 Pseudomonas sp. PDM16 NODE_1_length_1392308_cov_52.720126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 626625 28 100.0 32 ............................ CTGACCGCCCGCAAGGCGGACAACAGCAACGG 626685 28 100.0 33 ............................ TGAAGCGCGGCACGCAGCAGGGCATGGGGCGCG 626746 28 100.0 32 ............................ CGGAAGTCCTCAAGCGATCCGAACGTATCAGC 626806 28 100.0 32 ............................ TGCGCGTAATCGTGACGGAGTGAACATGGCAG 626866 28 100.0 32 ............................ GGTTGAGTGCCGTGTCCAACGCCGCATCGCCC 626926 28 100.0 32 ............................ AGTACCCAGGAATCAGCGCGAGGATCTGCTCA 626986 28 100.0 32 ............................ TATGCCCGCAAATCCTACTCACCACATCTGCC 627046 28 100.0 32 ............................ GATGCTCAGTGTGTTCTCGACCGCGTTGTTGA 627106 28 100.0 32 ............................ CGAGCCGCCGTGCATCATCAGCCGCGTACGCA 627166 28 100.0 32 ............................ TTCGACGTCGAGTTTTCGGACGGATCTGTCAT 627226 28 100.0 32 ............................ TCTACCACGCCGTTGGCACCGTCAAAGGCACC 627286 28 100.0 32 ............................ ACTCCGAGCAGAACGCGGCATGCTCAACCTGC 627346 28 100.0 32 ............................ AGCACGCCAGCGCCTGGCAGAGTGCCGTCAGA 627406 28 100.0 32 ............................ TATGCCCGCAAATCCTACTCACCACATCTGCC 627466 28 100.0 32 ............................ GGAGTCACCACCCAGCCGCGCACGGCCCGTCC 627526 28 100.0 32 ............................ GGCCAGCGCATACGCGCATTCGTTGACGACTG 627586 28 89.3 0 ..........C...............TC | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.4 32 CTGCACTGCCGTATAGGCAGCTCAGAAA # Left flank : GGCCTTGGACAACCTGCTGGCGCTGAACTGGCTGAGCGGCATGCGCGATCACATACGCCTGAGCGAACTGGCGCCAATCCCTGCGCAGGTGCAATGGCGCTGCGTCAGCCGCGTGCAGGTGGACAGTAGCCCGGAGCGAGCCCGCCGGCGCCTGGTGAGGCGCCACGGCATCAGCGATGCCGAAGCCCGGCAGCGCATTCCCGACAGTGCAGGTAAACGCTGCGAGCTTCCCTATGCAACCCTGCGCAGCAACGGCAATGGCCACAGCTTTCGCCTGTTCATCCGGCATGGACCGCTGCTCCACGCACCTACTGCAGGTTCTTTCAACGCCTATGGCCTCAGCAGTACCGCGAGCATTCCCTGGTTCTGACCCTCTTTTGGGATGTAATACGCAGGCCCTTTGAAATCAGTTACTTGCATGGGACTTCGGATAAAGGGCTATTTGCTGGTACGGGCTGTTTGATCTTTAACAATCAACGAGTTAGCTGATTATCAACCTA # Right flank : CGCCTACCGGTCGCTGTCGGCGCTCCAGCCTCCGCCCAGCGCCCGGGCGAGGGCAACGTCGGCCTGCAGTCGTGACAGGCGCAACTGGGCGCTCTGGTCTTCGGCGGCGTAGAGGGTGCGCTGGGTGTCGAGCAGATTGAGCAGGTCGTCGGCGCCGGCGCGATAGCGCTGCTCGGCCAGCCGCAGAGCTCGTTCGGCCTGGGCCTGAACTTCCTGCTGGGCCTGCCACTGGGCATCGATACCGGCGCGCGCGTTGAGCGCCACCTGCACATCGGCAAAGGCGGCGACGATGCTCTGCCGATAGTCGGCCAGCAGCTCCTCGCGCCTCGCCTCGTTGCGGTCACGCTCGGCGGCCAGTGCGCCGCCGTCGAAGATCGGTGCGGTCAGGGCGGCGGCCAGCGAGTAGACCGGATCGGCGAACACCCGGCTCAGGCCGCCGGCGGAGCCGCTCGCGCCGGCCGAAAGATTCAGACGTGGCAGCAGCGCGGCGCGGGCCGCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //