Array 1 764-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_CCXI01000134.1 Clostridium polynesiense strain MS1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 763 30 100.0 36 .............................. TTGTATTCCCTGTACTGAATAAGATTTTTCACGAAC 697 30 100.0 37 .............................. TATTTAAATTTGGGTATTAAGTTTCCTTTTTGTATTC 630 30 100.0 36 .............................. ATAGTTGAAGTTTGAATAGTTTGTGGGATTGCTATC 564 30 100.0 36 .............................. ATAGGTGCATGAATAATAGGTTTTGTCCTAATTGCC 498 30 100.0 37 .............................. TGGTATTTCCCAGGAGACTATTTCTTTACCTGGGTAC 431 30 100.0 37 .............................. TGGATTTGAAAACTGTAAATCGTTGCATGAATAACAG 364 30 100.0 36 .............................. ACTGTTCCCAATTGTACTGCCCAGGAACTAAAGGAA 298 30 100.0 36 .............................. TAGTTCTTTCTAATGCTAAAGATATTTCTTCCGGAC 232 30 100.0 36 .............................. GAAGTAAATACAATGAATTAATAACCAAAGGATTAG 166 30 100.0 36 .............................. TATCCAGTATAAATTTTTATATCCGCAATACCATAC 100 30 100.0 37 .............................. CCTTCTGCCCGCCCCTTGGGTATTCATACATACTCTG 33 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 100.0 36 GTTTATAGAATACCTATAAGGAATTGAAAC # Left flank : GAGACTAATTCGTCTGGAATTATACAAGCTGCAGAAGCATATTACCGATGATGAGAAATATAAGAGTCTTATTGTAAGGTGGTGAAGCCGTGTTTGTTATACTGGTTTATGATTTTGAGGTTAAAAGAGTAGCACGAGCCTTAAAGATATGCAGAAAATATCTCACCTGGGTTCAAAATTCCGTTTTTGAAGGAGAAATAGGTGAAGCTAACTACACTAAGTTAACTAAGGAGCTTACAAAGCTTATGGACAGAACAGAGGATTCGGTTATAGTTTATAGATTTCAAAATACTAAATATTCAAGGCGAGAAACCTTTGGATTAATAAAAAACCAACAGGAAGTTATACTATAAAAAATTCGGTCCACCCCCAATAGCGTAAAAAACCCCGGGGATGGACCGAATCAACAAAACCTGTAATCTCAAGCTTTAATAAAAATAAAAGGAATTTACTGATAAAAATAAAATTTTTCAAATGCAATAACCATGCCCTTTTAACGG # Right flank : CTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGAATACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 2 10862-8919 **** Predicted by CRISPRDetect 2.4 *** >NZ_CCXI01000134.1 Clostridium polynesiense strain MS1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 10861 30 100.0 37 .............................. TAATTCTAGCTGGATTAAATGATGCTATTTGGAATGG 10794 30 100.0 35 .............................. TCTAAAGCACAACATTTAAAAAGTACAGAGTTTCC 10729 30 100.0 37 .............................. CTAGAAAAGAAGTTAATAAATAGTGGCTGGAGGGGAG 10662 30 100.0 38 .............................. TAGTTCAGCACGTTGGAGTGTATAGAGAAGCCGAAGGA 10594 30 100.0 37 .............................. AAGAGAGTCAGACGTTAATTATAACACCACAGAAGAC 10527 30 100.0 36 .............................. TCTAGTTCATCCGCCTCAGCTATTTCGAAGGCCATA 10461 30 100.0 35 .............................. TATGTCAGTATCTCAATTCAAAAGCTTCTTACCTC 10396 30 100.0 36 .............................. GGAACTATAGGTGCTAGTATCGGTAATAGGGTTAAA 10330 30 100.0 35 .............................. CCTCCTGCTATAAGCTCTAAGGATTTATTAAACTT 10265 30 100.0 37 .............................. ACAGAAGAAGAATTGAAATATTGGAATAGGAATGCAA 10198 30 100.0 37 .............................. AATTTTTCGTGACTATATCAAAATAAATAAAATTTTA 10131 30 100.0 35 .............................. TTGTTGATTTTCCAGGTATAGGTAAGTTTAATGTT 10066 30 100.0 35 .............................. TTAATGAATTGTGAATTAACAACCATTTGCCTGAC 10001 30 100.0 36 .............................. TGGTTAAGTGTCATGTTTGTGGGTACAGCGACCATG 9935 30 100.0 36 .............................. CCATATAAAGGATTTTTATACACTATATAGAATATA 9869 30 100.0 35 .............................. CAGGTAGAACAGGTAGCTTATCTTCTTTTATGAGG 9804 30 100.0 38 .............................. GATAGTTGCCAATCTAAAAACGTACTCTGCCAGGCATT 9736 30 100.0 36 .............................. TTCAATTATACTTAACCCCTTTAACCTCCTAGTCGT 9670 30 100.0 36 .............................. TTCATTTTCAAAACCCCTTTCAAAATCTTATTTATA 9604 30 100.0 35 .............................. TTTTATCCCGGTTTCGGAAATGTTGCTTACATTAG 9539 30 100.0 37 .............................. AAGAGATACAGAGTTGGATATATATTAGAGATATTGT 9472 30 100.0 35 .............................. CTACTCTAATAAAGTCATCATTCTTCATGTAGGAG 9407 30 100.0 35 .............................. AAACTCTGTCCCCTCCCTTATATGGAAGGAATCCA 9342 30 100.0 36 .............................. GAAATAACGTTGCCGCCATGCTCCAACTTAAACTTT 9276 30 100.0 35 .............................. CTTGTTGCAGTGGAGAATAACCTTGTTCATCTGTA 9211 30 100.0 36 .............................. TTAGCACTTAATTGTGTTGAAAGGCATTTAGGACAG 9145 30 93.3 36 ........G........A............ ACTAATACTTCTGAATAAGTAAAAGCTCCGTCTATT 9079 30 93.3 36 ........G........A............ CAAGTCATAGTTTGGACAAGTTGTTAGGTTGTCAAT 9013 29 86.7 37 .....A...........A.....A.-.... CATGGAAAGGTCAAGGCACTCAATCTTTTTAATCTAC 8947 29 76.7 0 A....A..G...A....-.......A...T | ========== ====== ====== ====== ============================== ====================================== ================== 30 30 98.3 36 GTTTTTAGAATACCTATGAGGAATTGAAAC # Left flank : AGGGAGATTGCAGAAATAAACTTCAAAAAAGCACAAATAGATAATGGACAAAACTTCATAAATAATGCAGTAGAGGCAGTAAAAGATGGAGGTTATACCATTGAAATGATAAATAAATGTTCTAATATTGTAAAAGAGCTTGAAAGTAATAATATTGGGGAGCTGACTAAAAGAGTAAAGAGCTTTATAACGGATATAAAAAAACACTGTATGGAAGATGACTTTCTATATGATTTGCTAATCTATGAGAGAATAGATAATGAAACAGAGGTAATTAAGGCAGCTAAGGCTATTATATCCAAATTCACCTATATGTACTGCTAGAGAATAATACTTCAATCTCAACCTTTCATTATAATTCGGTCCACCTCCAATAGAGTAAAAAATCCCGGGGATGGACCGAATTAAGAAATGAGTGCTACCAAGCTTTAATGAAGATTATATAAAATTTTATATAAAAGTAAAATTTATAAAATACATTAACCATGCCCTTTCAACGG # Right flank : TCTGTTTCCAAGGAAGCACCTTACTATTTGATCATCTGTTAGAATACATAATATAAATTTAATTAGTAGAGTAAAATCGCTTTTAAGAAAACTATGGTAATTAGTGAATTATATAGTTACATAGATAAATTCTATATGTCATATATAGCTGGAATTCATGCTAAAAGACTATTATTTTGCTTAAAGGGAATCTATAATATAAAATAAAATATTTTTCATAGTTTTATTTTACAAAATAGTAATATATTGTATAATATTTTTAAGAAGAAAAATATTATTGATTTTTAATTATAAAGGGGGGAAAAAATGCAGGAAGCAATTTTACAATTAGGAAACGCAATTTTAGATAGCGGAAATCTCTTGGATAATTTAGTGAAAGAGGTTGAACCTATTAAGAACAAAAAACAGCTTCAGGTTTTAAAGATTATTTTTAATACAGAAAATAACACTTACTCTATAGAATGCAGTGAGGAAATGAATCTTAAAACTTCTAAGAAATA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGAATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 5076-2387 **** Predicted by CRISPRDetect 2.4 *** >NZ_CCXI01000135.1 Clostridium polynesiense strain MS1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 5075 30 100.0 37 .............................. CGGTATATCCCAGGAGACTATTTCTTTACCTGGGTAC 5008 30 100.0 36 .............................. AACAGATCATCAAGGAGTAATACCTCAGCAGTTTGA 4942 30 100.0 37 .............................. TAAAAAATCTGCTTCCAATTCTATTAAGTCGTATTTA 4875 30 100.0 36 .............................. TCTCTTCAACCTTGAATAATGCACTCTCCTTTAAAA 4809 30 100.0 36 .............................. GGAGCTTCTAGTATTAATGGAGTATTCCCTGACTAT 4743 30 100.0 36 .............................. CTCTTAGCACTAAGCCTATCCTGCTCTGTACCGAAT 4677 30 100.0 36 .............................. AAAATGCTAGTAAAGTGCCACAACTTGAGTTGCAAT 4611 30 100.0 35 .............................. TTATACTAGACACTGAAATGCAGGACGCATACAAA 4546 30 100.0 35 .............................. CAAAATGCTAGGGAAATAATGAAGCGGCAAGTTAA 4481 30 100.0 37 .............................. CCAGTTAAGAAGATTGCAAAGGCATTTGGATTGCCAA 4414 30 100.0 37 .............................. TAGAAAAAGAATAATTAAAGGTTCTCCTCAGGGGAGC 4347 30 100.0 38 .............................. TAAGCAGCTCTAGCACAGGCCCCTAAATACCTAGACAT 4279 30 100.0 36 .............................. AAGCTTACGTTTATCTTGTTATTAGCACTCAAGCCC 4213 30 100.0 38 .............................. ACAACCATTGCCTTGGCTATACATTTCACCACAATTGC 4145 30 100.0 37 .............................. TAGTATTCCGGCCATCTATCCCTCCAATTTACTGGAT 4078 30 100.0 37 .............................. TAATATCTTTAACTGAATTTCTTTGAGCCTATACTCT 4011 30 100.0 38 .............................. ACCGCCAGATGTATAATATATTCGGACAATGATAAACC 3943 30 100.0 36 .............................. TGGAAGAGAAGAGGAGATTAAAATAGGTGAATGTTA 3877 30 96.7 37 .................A............ ATAAATTTGCACATATCGAAGTAGCTAGATATATGCC 3810 30 96.7 37 .................A............ AAATCACTACCAGGCAATCTTTGTCCAGTTTGTGCAA 3743 30 96.7 37 .................A............ TTATCCACTCTCTAAAATCATTTATTAGTCCCCATAA 3676 30 96.7 35 .................A............ ACATTAGCAGGGTAATCAAAGGTTAATTTCAAACC 3611 30 96.7 36 .................A............ AACATATTCTGTTTTATTGCGGTTATGGCATCCCGG 3545 30 96.7 35 .................A............ ATGGCTGTAATAGTATCTCTATAAGGCATATATAC 3480 30 96.7 36 .................A............ TTCTTTCTCCTTGTTGCCAAACGCCAACAGCCATAT 3414 30 96.7 37 .................A............ TTTTTAGATTGTAACTAATCAAATATTGAACCACTAA 3347 30 96.7 37 .................A............ CTAAGAGTTCTTCTTTGGTTAAGGATACATTAGCTTC 3280 30 96.7 35 .................A............ CTAATAATCTCAATACCTTCGCTTGAATATCATCA 3215 30 96.7 37 .................A............ TTTTCTGGAATATACATCAATAAACTAGTTTCTTTAA 3148 30 96.7 35 .................A............ GTTGGTGTGGAAAGTATAGAGCTTAGGGGTAAAAA 3083 30 96.7 36 .................A............ ACTACAGGGAGGATTATAGAGAGGTTGACGATGAAT 3017 30 96.7 38 .................A............ ATGCCACTGAACATTGCAAAATATATTTCACCTTTAGT 2949 30 96.7 36 .................A............ ATACAACTCAAAGAATGATAAATTCGCTCAATAAAG 2883 30 100.0 38 .............................. AATTTTGACACATTGCAAGGTATAAAATAATTATACCC 2815 30 100.0 37 .............................. TATGCAACTAATCCGCCTAAAGAATAATCTTCTCTGA 2748 30 100.0 35 .............................. TATTTTTACTCCTGCTTAAAGCTTTACAATTCTTC 2683 30 100.0 36 .............................. TCTTTAATTCTAAACTTTTCAAACCGTGGCAAACTT 2617 30 100.0 37 .............................. AGGGTTAGGAAATAACCTAATAAATTAAAAAGGGGTA 2550 30 100.0 37 .............................. GATTGTGATAATATACTATTACGTTGCTATTTAGAGA 2483 30 100.0 37 .............................. ATATTAATCCACTATATTGATATACTTATACTTCTTG 2416 30 73.3 0 .....T..T.......AA.......CT.GA | ========== ====== ====== ====== ============================== ====================================== ================== 41 30 98.1 36 GTTTTGAGAATACCTATGAGGAATTGAAAC # Left flank : ATATACATTATCTCCAATAACCGTCTCAAGCACAGCAATGATAGGAGAAAGTAAAAAAACCTATTATTACACCCCAATGGAGAAGGAATTCTCAGAAATGATAAGAAAAAACTTAATAAAAAAAATAATAGCCTTCACAGGATCAGAACCGGATAATTTGGACTTTGAAATTAGAAAGGCAGGCGACAAGCTGAAGGAAAGTGTATTAAGCTATAAAGGCTTCGTTATAAAGGGATGGAATGGCGAATTCCTTTTAAAAGGCTCTAAAGAACTTATGTCAGCAGCACTAAACAGCGGCTTAGGCTCTAAAAATTCTCAGGGATTTGGCTTTATTATGATAAAAAAGTAGTTAAAAATAATTCGGTCCACCTCCAATAGTGTAAAAAACCCCGGGGATAGACCGAATAACAAAACAAGCAAAATAGCCAATGAAATGAAAATCAGCTTTTTAAAAGAATTATATACATAGAAAAAAGCCTGGAATAATGCCCCTTTAACGG # Right flank : TTCAGAACAGCTCTTACTCTGGTTTTGCATCGGAGTTGATAGAGAATACTTATAATGAATCAAAAAGCCTTATTACACCTATAACCCCATCACCATTTATCTTTAAAACTCCTTAATTAAATAAAACTTTACTCTTCAAAGAACAAGAATCTAATTAATTCAAATTTAGCCCTGCCATAAGTTATTTCAATTTTGAATTTTCCAAATAAACTAATTTATGCTTATAAGATTTTTATTAATAATCTGAGCTTTAGATAAATAAATCCATATATCCCGTAGGATGTTTAGGCCTTGATTTTTTCGCTGATTTTATATCGAATTTAATAGTGTTTTTTTATTAAATCTTTATCGAAAAAATTGAAGGAATTAACTATAAATAGTAGAACTATACAAATATATACAAAAATTAGGAGGTGGATTATGGCTGTAAAATTCATTAGTGTTTTAGGAAAAGGTCCTTATAAGGAGTGTATGTACCGTTATGAAGATTTCCAGCAGAA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAGAATACCTATGAGGAATTGAAAC # Alternate repeat : GTTTTGAGAATACCTATAAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 109949-108258 **** Predicted by CRISPRDetect 2.4 *** >NZ_CCXI01000133.1 Clostridium polynesiense strain MS1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 109948 30 100.0 37 .............................. TATGTTAATTGTTATGCTTCGAGGAGAATCTTTTCTT 109881 30 100.0 35 .............................. ATATAACTAGTAAGTAATAACCTATAACCACATAC 109816 30 100.0 36 .............................. AATATTTCACCTTTACACCTCCTAATTACCTATAGC 109750 30 100.0 37 .............................. CCCATAGAACCTTCTAAAGCACCGGTTAATACATTAG 109683 30 100.0 38 .............................. AAAAGTAATATTAATTATGGTAACATTACTTTTTAAAA 109615 30 100.0 36 .............................. GAGGTTGAAAATTTTCTGAATGAAAATAGGTCATTC 109549 30 100.0 35 .............................. TTATTCCATGGATAGAAGCAGTTTTAAAGAACTGG 109484 30 100.0 35 .............................. TAGATATTTCTGTATTATACATAATGCAGATTTAC 109419 30 100.0 37 .............................. TAAAACTCTTCTGCACATTTCCTGCAGATTTTTATCC 109352 30 100.0 35 .............................. ACAAGCAATTGTTCGGGAGTTTCTTCTTTTTCTAA 109287 30 100.0 37 .............................. TCTAAATAATCAAAGGTTAATCTCAAACCGTTTTCTT 109220 30 100.0 35 .............................. ATTTAAACTTTCTGCATATAGCCACCTTGTAGCTA 109155 30 100.0 37 .............................. TTTGTTTCTATATTAAAATCTAACAGTAATCCTGTTA 109088 30 100.0 37 .............................. AGATAAGCGAAGCTATAGCACGTTATTATTTATCCTT 109021 30 100.0 36 .............................. TCTGTAAAACCATCTGCATATCCTACTTCTGCCATT 108955 30 100.0 36 .............................. CACCAATTTGAAGTGTCATAAAGTTTTGTACTCATA 108889 30 100.0 37 .............................. TCAATTCTCAAAGAACAGAATATATCACAAATTGATA 108822 30 100.0 37 .............................. AATACTAACAATCTTAAAACTATCACTTCTTTGGGAA 108755 30 100.0 37 .............................. TTTAATTATGAAATGATATACAATATATAAAAAGGGG 108688 30 100.0 37 .............................. CCACAATCACAAATACATTCCCATATAACATAATTTC 108621 30 96.7 36 ...................A.......... TATCATGACAATCGAAATCTTCCGTTTCTCCTATAT 108555 30 100.0 36 .............................. GCAAGTATTGAAGCTAAGGTTTGAGCTTTTTCTCTT 108489 30 100.0 36 .............................. TAGGGATAACGTGCTGTTACCCCTATACTGAAGCTG 108423 30 100.0 37 .............................. ACACTTGGTGGTGCAGCCATAGCTTGGCTGTTTAAAT 108356 30 100.0 37 .............................. TCCACATTTTCTGCCAATTGCGACTCTAAGCTAACGA 108289 30 83.3 0 A..G........T......C......G... | GC [108273] ========== ====== ====== ====== ============================== ====================================== ================== 26 30 99.2 36 GTTTATAGAATACCTATAAGGAATTGAAAC # Left flank : | # Right flank : TTGTGTCGCATTATCTATCTATTATGGATTATTTATTATGGAACAATACTTATAAGGAATTAATACTAAGAGAGTATACTCATACTTTCAAATAAAAACAAAAGTTTGACTATATTATAACTTCAACAGCATAAATTAAATCTGAAAGCAGGTGAAATCTCACCATGAGAAAAAAGCGAATTAACTACTTGGTATAGTTATATTAACTGATAGTATATTGTACCAAGATAAAAATTATATTTACTGTCAGGATAGCTGGACTGCTTTTCTAATTAAAAAATAAAAGAAAAGAGGATCAGTTATGGAGCAAAATAAATTAAATAAAGCATTAATAAAGGACTTTAAGCCATTATTTCCGAAAAACACTTTAGATAACATTCTCAAAGAATTAGAAAAAAGCTTTTTTGAAGCTTTATATGCTGAAGAGTTTTTTCCATATCTCCGTTTTAAAGATGTTGGAGCAGTGGTATATTATGCAAAAATTATTCAGTGGGAATTTC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGAATACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //