Array 1 17565-18815 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOMA01000201.1 Serratia marcescens strain EGD-HP20_1 Scaffold_201, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17565 29 100.0 32 ............................. CCGATTGATTACCAGGATGAGCCGCTCAAAAA 17626 29 100.0 32 ............................. CTTCTAGGTTACTAGGGCTTAGATAGCTTAGA 17687 29 100.0 32 ............................. GTATGGGCGGTATCGACCATCAACGGCAAAGA 17748 29 100.0 32 ............................. TCGACGGGTATAACCCTTTCGACAATGATGCG 17809 29 100.0 32 ............................. GTGGCGCACAAACACGTGCACCGCTGGGTGAA 17870 29 100.0 32 ............................. TGCGCTGTACGCAATTGTCAGCTCCAACATGA 17931 29 100.0 32 ............................. ATATCTCAATCACCCGTAACTTCTCATATCCG 17992 29 100.0 32 ............................. CCAGTCCTTCACGTCCTCGGCGTGGATGTGCT 18053 29 100.0 32 ............................. GCCGGAGACTATGCGCGGATCCTCACCGGCAA 18114 29 100.0 32 ............................. CCGTTGGCGTTATACAGCTCGCGCGGCTCCAG 18175 29 100.0 32 ............................. GTCAGCTTCACGTTGCTTCTCCAGCTTCGCAC 18236 29 100.0 32 ............................. GTCTTCTCGGCATCGTGTTTTCTGAATCGGTG 18297 29 100.0 32 ............................. AAGTTCCGCGTACCGCGTGGAGTGCAACGCCT 18358 29 100.0 33 ............................. CCGTTAACCGGGCTGGCGCCGGCATCGGAGTTA 18420 29 100.0 32 ............................. TACACGCAGAGCGCAGATGTGATGACCGTTTG 18481 29 96.6 32 ...........A................. ATCGATTCACATCTTAAATGGCAGATGCCTGA 18542 29 100.0 32 ............................. CTCAGTTTGGCGATTGCGGGCGCCAGCCTTTT 18603 29 100.0 33 ............................. CATCGGCTTTTGTTTACCGCGCAATACATGTGC 18665 29 100.0 32 ............................. TACAAGGCCGAGAAAGAGGCCGGGCTGATTCA 18726 29 100.0 32 ............................. AATTCGAGCCAATCCCCCTGCCAGCACAAGCA 18787 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.8 32 GTGTTCCCCGCGAGAGCGGGGATAAACCG # Left flank : AGTGCCTGCGCAGCGTCGAGATGATCTACCTGACGCTGGCGTTCATCACCACGCCGATCTTCTACCTGTCCGGCACTATCTGGCCGCTGCAGTCGATGCCGGCCTGGGTGCGCGCCATCTCGTACAGCATCCCCTCCACCTGGGGCACCAAGGCGATCGCCGGCGTCAACCAGATGGGGCTGTCGCTGAATGAGGTGTGGGGCGACGTCGCCATGATGCTGATACTCGGTGTGGTCTACACCCTGCTGGGCTTCTGCGTCGGCTTCTGCGTCGGCTTCTTGCGCAACAGCGTGGCGCTGCGCGGGATGTTCAGGAGGCGGCGGGCGTAGGGGATGTATCTTGTTGTTATAGCGTGAAAATTCGGTAATTCTGCTTTATTTCTATAGATGGATTTTTTATTTATTAAATTTCAAAGGGTTATGTGGTTTCCCGGATGCTTAGATCGCGGTGAAATTTCGTAGATGTTGAAAATTCATTTAATTCAACTAGATATATTTAGA # Right flank : GCCAACAAGAGCCGCACGATTGATGCCGGGTTGTGTTCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 40-672 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOMA01000284.1 Serratia marcescens strain EGD-HP20_1 Scaffold_284, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 40 29 100.0 31 ............................. GTCAACAATTGAGTCCTCGATGGCTTGGGGG 100 29 100.0 32 ............................. CCATCGCGGATGCCCGTGCGTTGCTGGCGTCT 161 29 100.0 32 ............................. TAAACCGCGCACGCGGCGCCGCAGATCAGATG 222 29 100.0 32 ............................. AACAGGCTAACTTCACCGTGCTCAACACAGTA 283 29 100.0 32 ............................. CATGTTGCATAGATAGTGCTTGACTTTGTTTT 344 29 100.0 32 ............................. AGCGTCGCAAAGGCGACGGATGTTCTTCAGTG 405 29 100.0 32 ............................. GGCATGTGGGAGTTTCCGCGTATTAACCAGGG 466 29 100.0 32 ............................. CGCTCGGTGATTGGGTTCATCTCGATGGTGCC 527 29 100.0 32 ............................. CCATCCAGGCAGAGACAGTGCTGTATGAGGCC 588 29 93.1 27 .............T..............C CCAATGCCACTGCGGATCCGCCAAACA 644 29 86.2 0 ...............A........G..TC | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TAAACCGTGCCGTATCGCGCTGTGGTATGCCGCGTGCGCG # Right flank : CCAGAGCTTCACTGCCGCACAGGCAGTTCGAATAGAAGGGATAAAACTTTACCGACACCTGTTAACCAGTAAGCAAATACTCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCCAGCGTCAGCTCCCCTTTGCCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGATACCAGTGGGGTAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAGATGACATCAGGCCGCCATAGCTAAGCGCGGCATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCCGTCTTGACGATAAGGGATTATTTTACACCCACGGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 20-475 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOMA01000309.1 Serratia marcescens strain EGD-HP20_1 Scaffold_309, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20 29 100.0 32 ............................. GATTGGTTCGAGCCATCCCGAACCGTTGAAAA 81 29 100.0 32 ............................. AATCAGTATTGACGCCGCGGCGGGTATATTTC 142 29 100.0 32 ............................. AAGTTGCGCGCACTGTGACCGATAGGCCGGAA 203 29 100.0 32 ............................. CGCTTGGAAGAAGAGCGCGCTGCCTGGATGAC 264 29 100.0 32 ............................. CCCAGGGAACCTCTCTGGGCTCTAAAATTTAA 325 29 100.0 32 ............................. GTAGAGAAAATTTTCACGTGCTGGGTTTGGGA 386 29 100.0 32 ............................. AGCAAAACGATTTGCTTACTCGCGGCCTGATT 447 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GATCACTTCAGACAGTGATG # Right flank : CTGGTTCCGTCCGGGTTCTTTATCCTCAATCCGTGTTCCCCGCGCCAGCGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4962-4505 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOMA01000025.1 Serratia marcescens strain EGD-HP20_1 Scaffold_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4961 29 100.0 32 ............................. CGTTTCAGCTCGATTTATTACGAACCAGGCGG 4900 29 100.0 33 ............................. GTAAGAGCGTTGATCAGCGCCTTCCATGTACCC 4838 29 100.0 32 ............................. ACGTCGGCGCGTCGCTGGCGAACCAGAAGAAC 4777 29 100.0 32 ............................. CAGTTCCAAAACATCCCGCGGATCAGCTGTAA 4716 29 100.0 32 ............................. CCGCGGTTGTCGGTCATCTCCAGCGACAAGAC 4655 29 100.0 32 ............................. CTGATCGTCACCAGGCGTGGCGAGGTATTGAC 4594 29 96.6 32 ............T................ CGGCCCTGACGGCCCGCTAACGCGGAGATACG 4533 29 86.2 0 ..........T.TT............T.. | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGATTGAAGAAGTATTGGCAGCAGGAGAGATTGCAGTACCACCACCTTTCGAGGATGCGCAGCCGCCGGCGATTCCCGAGCCTGTCGGATTTGGTGATGTTGGTCACAGGAGCCGCAGTTGATGGCGATGCTCGTAGTGATAACGGAACAGGTTCCTCCCAGACTGCGTGGCCGCTTGGCGGTCTGGTTGCTGGAGATCCGTGCGGGGGTTTATGTAGGCGATGCATCGCGTAAAGTCCGCGAGATGATTTGGCAACAGGTTACTGCGTTGTCAGATGAAGGGAATGTTGTTATGGCCTGGGCGACGAATAATGAATCAGGATTTGATTTTCAAACCTGGGGGGAAAACCGGCGTGAGCCGGTGGATCTGGATGGACTGAGGTTAGTCTCTTTTTACCCTATGGAAAATCAATAAGTTACCGATCTTTAAAAACATGGAAAAGTTGGTGGAATTTTAGGTTGGTAAAAAAATAAATTATTACAATTGGTTATGTTTATA # Right flank : TCTTTTATTGGCGGGGTGCGCGCCATCTCGTACAGCATCCCCTCCACCTGGGGCACCAAGGCGATCGCCGGCGTCAACCAGATGGTGCTGTCGCTGAATGAGGTGTGGGGCGACGTCGCCATGATGCTGGTGCTCGGCGTGGTCTATACCCTGCTGGGCTTCGGCGTCGGCTTCTTGCGCAACAGCGTGGCGCTGCGCGGGATGTTCAGGAAGCGGCGGGCGTAGGGGATAAATAAAGGCGCCATTTTCGGCGCCTTTATTATTTCGTATTATTGATATGTTTAAGGTGATTTATTTAGCGGGACGTCTACTCTTGTTTTTAATTTGATTTGTTATGTTGACTTTGGTAGTTGTAATTGTCGACCTGCTTAGGAAATTGATGGTTGGCGTTAACTTTATCTATAACATGTTATTTAAAGGATGGAATAATATGTCAACAATAAGAGCGCTTGATTTTGATGAGATGAAATTGATTGGCGGTTGTGGCGATGGAAATAACG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 14374-13856 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOMA01000025.1 Serratia marcescens strain EGD-HP20_1 Scaffold_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14373 29 100.0 32 ............................. GCCAACAAGAGCCGCACGATTGATGCCGGGTT 14312 29 100.0 32 ............................. AACTGGGGTTTCATCGCTGAGCAGAATATCGC 14251 29 100.0 32 ............................. ATGTGAAAGCCCGGATAATGGGCGGTAAAGCT 14190 29 100.0 32 ............................. AAAGCGTCCGACGGTAGCATTTTTATCGCGTA 14129 29 100.0 32 ............................. TACGGCGTGATCCAGACGGCAAAGCAGCACGT 14068 29 93.1 32 ..........T............G..... GTGTTTGCGCTGGATGTGGTGGCACGGCACCA 14007 29 93.1 32 .......T....................C CAACTGATGGGTAGTTGGCCGGTCAAGATATG G [13985] 13945 29 82.8 32 A........ATAT................ GGCGCGACAACGAAGCCTACAGCAGCATTAGC 13884 29 69.0 0 A.......TA..TA..T........G.AA | ========== ====== ====== ====== ============================= ================================ ================== 9 29 93.1 32 GTGTTCCCCGCGAGAGCGGGGATAAACCG # Left flank : AGCGGGGATAAACCGAATTCGAGCCAATCCCCCTGCCAGCACAAGC # Right flank : ACCAATAAAAAGAGATAATATCAACCACAAAAAAGTATCATGCTAATTATATCAATTGGTATAAGCTTTTTTTTGTCTTATTTAAGAGAATATATGAAATTTAAATTAATCTTTTTTTGCTTTGGCTTTACTGTGTGAGCTTAACTGGTTTTTTGTGTTTCCGAATAATTTATAAGTACCCTTAATCTGATAGAGATGCTAAAAGTATAAAGCGTTATTTATATCTAAACGGGATTTTTTATGGGAAGCGATATCCCTGACTATATGCGCTACTGGGGAAAGGCCAAAAAGGTAGACTTACCAGAGGGGGATGATTACCACCTGCTAGCTTATCACTGTCTGGATGTGGCGGCGTGTGGATATCAAATGGTTATTGATAATCGTTTCCATGCCGCTGACATTTTTGCAGAGATCGGATTTTCTCGAGATGATGGCGCATACTGGTTTGCTTATTTCCTGACGTTACACGATATCGGTAAATTTGCGCGAGGTTTCCAACA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1360-50 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOMA01000146.1 Serratia marcescens strain EGD-HP20_1 Scaffold_146, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1359 29 100.0 32 ............................. GTGCTCGCATCCTTGATCTTGGCCTTCATCTT 1298 29 100.0 32 ............................. CAGGTGACGATAGCCACGAATCAGGAACGCTG 1237 29 100.0 32 ............................. CATCAGCGGTGCGTTTTATCACGTATTGAAAG 1176 29 100.0 32 ............................. GTAGAGGACTACACCCTTGATGGAGTGAAGGA 1115 29 100.0 32 ............................. ACCGAGCTGGCAACGTAGTCCCGAACGCAACG 1054 29 100.0 32 ............................. ATGGCGGTCACCGCGGCATCCACCGCAGCAAT 993 29 100.0 32 ............................. GGCGAGCCGTGGCGCATTATTCTTGATAGGGA 932 29 100.0 32 ............................. AACATGGCAGAGCAGGACGGCGGTAGCTTGGT 871 29 100.0 32 ............................. TAGCGATGAGCCGATCACCCCACGATTGTTTA 810 29 100.0 32 ............................. GTCACAGACTTTTCAAAGATGCTCACCAGCAC 749 29 100.0 32 ............................. CAGCTGTCCTATAGTATCCATCAAGCAGTAAC 688 29 100.0 32 ............................. CGATGATGGCCCAGCTGCAACTGCAGAGCCTC 627 29 100.0 32 ............................. ATTTGCCGGCCGGCGAGGGTGATGCTGCCCAT 566 29 100.0 32 ............................. CTAATTGCATCTTGTCGTCGTCGTCCGGCCAA 505 29 100.0 32 ............................. CCGACAGTTTTAAACATGGTGCTTTCTCCTTG 444 29 96.6 32 ............................A AAAACTTGGTCTTGTTCAGCAGTCCATCGCGG 383 29 100.0 32 ............................. CTGTAGAAGTGGTTTAATAGGCTGCGGCTATG 322 29 100.0 32 ............................. ATGTGAAGCATTTCCCGCGTTACCGGACAGTT 261 29 100.0 32 ............................. GCAGTACCACATACGAACGTTTGGACGTACCC 200 29 100.0 32 ............................. CCGGCATTGCATCATTGTTCTCTAAATGAGAC 139 29 100.0 32 ............................. TGAGAAACCGACCAACCACGCCACCAACGGAA 78 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GATAAACCGCGTCGATCCGGTTTGGTGTGGAGGGCTTCAG # Right flank : GGATGGCACATCGCGATCACTTCAGACAGGGATGTGTTCCCCGCGCCAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //