Array 1 11937-10450 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLJU01000047.1 Klebsiella quasipneumoniae strain k1821, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11936 29 100.0 32 ............................. GGCTTCCGGGTGACGGGCGTACAGGGTGAGCA 11875 29 100.0 32 ............................. CGATTACTGAGTCGTTCACGAACCGGCCACCA 11814 29 96.6 32 ........T.................... CAAAAATGCCAGGCACTGACTAAACCGCCGTC 11753 29 100.0 32 ............................. TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG 11692 28 89.7 32 .....-......CA............... AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 11632 29 93.1 32 ............CA............... GCACCCTCACGGATACCTTTTGCACAGTGTTA 11571 29 86.2 32 ......T.....CA..............C CTTAGAGAAGCAAAAACCCCAACGAGGCAGGG 11510 29 100.0 32 ............................. TTACTTTTTGGCAGTTGGTAAAACACTTTTGC 11449 29 93.1 32 ............CA............... TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 11388 29 93.1 32 ............CA............... GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG 11327 29 100.0 32 ............................. GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 11266 29 100.0 32 ............................. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 11205 29 93.1 32 ............CT............... ATTCCGTTCATAATTTTGTAGCTGCCCGCTAT 11144 29 93.1 32 ............CT............... TTCTCTCCGCCGGGCAGTGTGATGCCGGAGGG 11083 29 93.1 32 ............CT............... GCAGCGGCCTGATGATGATCGATATGAACGGC 11022 29 89.7 32 ............CA...A........... TGAAATTGACGAGTGGATCAATCAGCGTATTG 10961 28 93.1 32 .....-.......A............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 10901 29 100.0 32 ............................. TAATTCAGGAAATGAATTCTAAAATTGAATCT 10840 28 86.2 32 .........T-.CA............... TGAGGCTGCTGACGGAGAATTGGGACCTGTTC 10780 29 93.1 31 ............CT............... TGACTTTTATGAAATTTTTTCTTAAAAAACT 10720 29 89.7 32 .........T..CC............... CGGTAACGCAAATATGATCCGATGTCGTCAGG 10659 29 93.1 32 ............CA............... TTACTTTTAAAATAAATGTCTATATTGGCTCA 10598 29 96.6 32 .............C............... TTCGAGCACGGCCATGTGGAACTGTTCAGTGT 10537 28 89.7 32 ..........-.CA............... TTACGCATTGTGATCGGGATTCGCTTCAGACG 10477 28 82.8 0 ............CAC........-....A | ========== ====== ====== ====== ============================= ================================ ================== 25 29 93.8 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCTTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCTGGATAACCCACATTCTGCCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGGTAAATTCATGCCTTGGGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGACAGGGCGGTATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGTTTATATATACAGTGTTTTTAGGTGGTCGGAGGTTGTGTCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCTCAGGATTATACTTCCAGTGAGCTAGACTTGAACGATTATTGCATCAGGCATCC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.39, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //