Array 1 943-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQI01000001.1 Capnocytophaga canimorsus strain 12161B-4 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 942 47 100.0 30 ............................................... TTTCTAATATTTAGGACGATTCCAATCTTC 865 47 100.0 30 ............................................... CACTTTACCGTTTTTGTCTATTTTGTCAAA 788 47 100.0 30 ............................................... GGGAATACATATCTGCCTGTAGAGGCACAA 711 47 100.0 30 ............................................... AATATTAATGTATTAATAAATTATCATTTT 634 47 100.0 30 ............................................... TGCAAATCATTTGCGAGAGCCTATTGAGAG 557 47 100.0 30 ............................................... TTAACCATTATGAAAATAAATCTTTTTACA 480 47 100.0 30 ............................................... TAAAGTAATCGGCTGGATAATGCCTAATTC 403 47 100.0 30 ............................................... ATCAGTGAAAAGAAGTTGTAAAATGATACG 326 47 100.0 30 ............................................... GGCGCGACCAAGCTACTCGAAAACCTGGAA 249 47 100.0 30 ............................................... TTGCCCTGCAAGATGCCCTCAAAGACATTT 172 47 100.0 30 ............................................... AAGTGAGCGTTGGTGGGGTTGTAGTACGAT 95 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 12 47 100.0 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : ACAAATGCTATACGGGTGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAATGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAGTTTTCTATCTATTTGAGGCACTGTCCGAGTAGAGAAAATGCAGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAGCAGTTTGGTGATATGGAAATATTTCATTCTAAAGTACGCGAAGATCCGCCACCTACTTACCAGCAGCTCGAGTTATTTTAGAAATAGAATGAAAAAAATGGATTTACTCAGCCCAATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAATAAAAATAATCCTCTGACAGACAGAGGATTATTTTTTGAG # Right flank : CCATTACACGCTCCGTCAATGAGGGTAAAAAGTTGTAACTAATCACAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 5-513 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQI01000042.1 Capnocytophaga canimorsus strain 12161B-4 sequence42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 5 47 100.0 30 ............................................... ATACTTCATAGTGCATTGTGTGCTAATGTT 82 47 100.0 30 ............................................... TTCAATCGGGTTATAGGCAAATATAAAGAA 159 47 100.0 30 ............................................... GAAATTCCATACATTCTTCATATTCTCCCC 236 47 97.9 30 .........C..................................... AGAATGTTATCAAGAGGCTGATGAAAAAAA 313 47 100.0 30 ............................................... TTATTCTGAAGGCAAAATACTGCCTTTGTC 390 47 100.0 30 ............................................... CTTGTCGTACTTGGGATACCTGATCAACGT 467 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 7 47 99.7 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : GACAG # Right flank : CAGCGTTGTTGGAGTTTAGTCTATCATTTCCGTTGTAACTAATCACAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAAAGCAATTTACAACAACTTTGATACCCGTACTTCAAAATTAGAGGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTGGGTTGTTTTATTTACCTTAACCACGTTTGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACATAGTCCTATTGATAGTGAAATAAAAGTAGGTTGTAACTCATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTTTTCCCCCAATGGTCAGCAATCCGATACGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTTTGCTGATTTGGCAGATGAAAACAAATCGGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACAATTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 42501-40788 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQI01000005.1 Capnocytophaga canimorsus strain 12161B-4 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================================================================== ================== 42500 47 97.9 30 .........A..................................... CTATTGGTATAAGTATCGCAAGAAAAAGCC 42423 47 97.9 30 .........A..................................... AAAGGAGATGATGTAGTTGAGCTAAAACAC 42346 47 100.0 30 ............................................... AGCCTCAGAGGTTTCCGAACTGGCAATTTT 42269 47 100.0 30 ............................................... ACCGCCAAAGGCGTTACCACGAAATCAACC 42192 47 100.0 30 ............................................... TCTTGTGAAAAGGACACCGAGAGGATTCTA 42115 47 100.0 30 ............................................... ACAAGAGCAATTGTTCTGGTGGAAAATTTG 42038 47 100.0 30 ............................................... CGCCGTGATAAGCAAACGTGCCTTTCAGCG 41961 47 100.0 30 ............................................... CACAGGAACAATCAACAGTTGGAGTAAGAA 41884 47 100.0 30 ............................................... CTCGTATATTGGTCGAACGTAGAGCAGTCC 41807 47 100.0 30 ............................................... ACAACTTACAGAAAAGAGATAGGCGTGTTT 41730 47 100.0 30 ............................................... ACTCCAATTCTATGGCACTATCCAACCCGT 41653 47 100.0 30 ............................................... CACCGCCTCATAACTCATTGTGTCAAAGAC 41576 47 100.0 30 ............................................... ATGGCTACTATGATAACCGAGAAGACTTTA 41499 47 100.0 30 ............................................... TGCCCTTCGTTGGTGTTGTAAAGCAAGTGC 41422 47 100.0 30 ............................................... AATATGAGGATATAAAATACAAAAAGCCTT 41345 47 100.0 30 ............................................... AATCTTTAATTTGTTCAACCAAAACAGAAA 41268 47 100.0 30 ............................................... TACTCGCCAAACCACATCGTTTCGTTAGAC 41191 47 97.9 30 .........A..................................... TTAGAAGCAGAAAACCTCAAAAAAAGGAGA 41114 47 97.9 30 .........A..................................... TCTAACTCTGTTGTTTGCCGTCCAACTAAC 41037 47 97.9 30 .........A..................................... TGCTTGGTTTTATTCAAAAGACGCAGGTTT 40960 47 83.0 78 .........G........................T.....AGCACT. ACTGAATACCATTGAAAAAAAAACTAATGAAGTAAAGCAATTTACAACTCGCATTTTGCGAATGAGTTTGCCCGAGTT T [40918] 40834 46 72.3 0 .........A.C...........A-...T.....T..G..AGTACT. | T [40800] ========== ====== ====== ====== =============================================== ============================================================================== ================== 22 47 97.5 32 GTTGTAACTCATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : CCTTAGCATAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACCTCTACCATATCAATAAGTACAGGAGGTACGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACAATATTGATTGGTATTATTATGAAGGACAGGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTATAGATGCTTCCTACTCCTATCGGATACAAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACATGAGTTTTTACTATAATGGACAATTGCGTGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAAAGCAATTTACAACGTATCTGTGTAGGGGTCTGTTGATGAAACT # Right flank : ACTGAATATCATTGAAAAAACTAATGGAGTAAAGCAATTTACAACGTTTTTGGGGAAAAGCCCCATAAGGTACTCGTTGTCTTTATCCGCCTTGTAATCAAGTTCTAAAAATCTGATATAAATCAATGGTTTTACTTATAAAGATTTCGATGATTTTACTTTTTCATTGCAAAAAGAATTCCTAAATTTGCATACTTCTTTATTGAAAAGGAATTTTTTACTTATCTGTTTAATCATTTTTAATAAATTTTAATTATAAACAATGAATAAATCGGTTTATATAATCACTCCTGATGCTTATAGCGGCAAGTCGTTGGTAAGTTTAGGGGTGATGCAAATGGTTATGCGTAATACTCCCAAGGTAGGTTACTTTAAACCCATTTTGGAGAGTAAAACCCAGAAAGATAATCATATTGCTACAATGCTCGCCCATTTTAATATCGAAATGGAATACGATGAAGCCTATGTATTTACCCGTGCGGAGGTAGCCGCAATGAAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTCATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 2 43376-42712 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQI01000005.1 Capnocytophaga canimorsus strain 12161B-4 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 43375 47 100.0 30 ............................................... TTATTATGTTGACGTTCCCACTGATAACAA 43298 47 97.9 30 .........C..................................... AGCTCTCTTATATTCCCATTCCAGTCATAT 43221 47 100.0 30 ............................................... TCCCACGATTGGCTTTCTCTTTGGTTTATT 43144 47 100.0 30 ............................................... TGAAAATAAACTTGGACGATAAAAACCGAC 43067 47 100.0 30 ............................................... TATACGCCAATATAAGCATCCCTTAGCATA 42990 47 100.0 30 ............................................... CTCTACCATATCAATAAGTACAGGAGGTAC 42913 47 100.0 30 ............................................... AATATTGATTGGTATTATTATGAAGGACAG 42836 47 100.0 31 ............................................... TATAGATGCTTCCTACTCCTATCGGATACAA 42758 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 9 47 99.8 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : GAAAGCAATTTACAACGTAGAAAGTGTTCGCATCACTGGAACGATAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTAGCCGTTTCGGCATCCATACGCTCCAGTTGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACCATACGGAACTACTACGTACACGTGCGAAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTTGATTTTGTTCCAAACGTATTGAATTTTAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACCAGTACCATTTTGCAAAATGCAGGTATTTCGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAGCAATTTACAACAAGTTTCACTATTACCAACAAAAAATTTA # Right flank : ATGAGTTTTTACTATAATGGACAATTGCGTGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAAAGCAATTTACAACGTATCTGTGTAGGGGTCTGTTGATGAAACTGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACCTATTGGTATAAGTATCGCAAGAAAAAGCCGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACAAAGGAGATGATGTAGTTGAGCTAAAACACGTTGTAACTCATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACAGCCTCAGAGGTTTCCGAACTGGCAATTTTGTTGTAACTCATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACACCGCCAAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA // Array 3 43825-43548 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQI01000005.1 Capnocytophaga canimorsus strain 12161B-4 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 43824 47 100.0 30 ............................................... TAGCCGTTTCGGCATCCATACGCTCCAGTT 43747 47 100.0 29 ............................................... CATACGGAACTACTACGTACACGTGCGAA 43671 47 100.0 30 ............................................... TTGATTTTGTTCCAAACGTATTGAATTTTA 43594 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 100.0 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : GAAAGCAATTTACAACGTAGAAAGTGTTCGCATCACTGGAACGAT # Right flank : CAGTACCATTTTGCAAAATGCAGGTATTTCGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAGCAATTTACAACAAGTTTCACTATTACCAACAAAAAATTTACGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTTATTATGTTGACGTTCCCACTGATAACAAGTTGTAACTCATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACAGCTCTCTTATATTCCCATTCCAGTCATATGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTCCCACGATTGGCTTTCTCTTTGGTTTATTGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTGAAAATAAACTTGGACGATAAAAACCGACGTTGTAACTAATCACAAAGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //