Array 1 2038355-2038146 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032134.1 Acinetobacter chinensis strain WCHAc010005 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2038354 28 100.0 32 ............................ TACTATCAGACAATGAGTTGCGTTCCCGAAAT 2038294 28 100.0 32 ............................ CAAAACAACACCTGTTGTCATCGCTACACGTT 2038234 28 96.4 32 ............G............... AACCCAACCCATCGGCAGATACCAATGATTTA 2038174 28 96.4 0 ............G............... | G [2038148] ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TATGAATGCCGTTTTTATCAAGTATTTTCTTTGAATTGACCAAGAGTGGATCGTGGAAAATACAGCATATATTGTTAAGCACTGCGACCGCTAGAGATTTTATCTGGGTCATCACAAAGAGTAAAGCGAACAAAGACATTTATTGATCAATTGGAACGGGTTGCTGCGATCTGATTTGCACAAAACTTCTGACTTGATAATTGGTGGGTGGGATTGTAATTCTGCTGTTATTCGGTGTCTGCTTAAGCATATAACAATGGCAATAAAATTGGGCAGGCTTCAGCTCTGTTTTTAATATGGATGATTCAGGGTAATCAGGTATTATGAGTATCTGGTGAATAAGCCACTCATAGGTTAAAAGATGATTTTAACCAAAAATATTTTGACTCATTAAAAACTAAATTTAATCAATAGTTTATAATTTTAATTTAAAATTGGGTTATTCCCTGATTTTATGGTTAAACTATTGTTGTAAAATGATTTTAATCATATTTTTTTGT # Right flank : CTTCCAATTTCTGCTGGACAACCTGCTCCGATGTTCACTGCCATGTTTTGAATAAAAATACCGTACGGGGTATAAGCATAAGAAAAGTTGATTGTTTTTTGAAAATAGCGTAGTATTCGTCATTGGAAAAAGTTTTGTTTTGGTAAGTCTTTCTTAAGTATCGTAGTTTTAGTGATAATGCTTCGTTTTACAGATTCCAGTACCTTGCTTTATTATTTTCAAAGTTGTCATCAGTCATTTATAAAAAAATGACTAATACTATTAAAAACTACGTAGGATTTACTATGTCAAACTCAAATGTTGTTAAAGGTACTGTAAAGTGGTTCAACGAAACTAAAGGTTTCGGTTTCATTCAGCCAGAATCAGGTCCTGATGTTTTTGCTCATTTCAGCGAAATCACAGGTTCAGGTTTTAAAACTCTGACTGAAGGCCAAAAGGTTGAATTCAGCGTTGCTCAAGGTCAAAAAGGCCCTACAGCTGTAAATATTGTTGCTCTGTAA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2203109-2202299 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032134.1 Acinetobacter chinensis strain WCHAc010005 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2203108 28 100.0 32 ............................ TGAAACCAGTTTCGAGCAGGAACGTATGAAAG 2203048 28 100.0 32 ............................ TGTGATTTTTATAACCCTGCAGATAATTGGAT 2202988 28 100.0 32 ............................ ATGCACTCCCGTCTGCAAGATGCAGATCTTAT 2202928 28 100.0 32 ............................ CGGTAAAGAAATATGAACAGGCACGTATATAA 2202868 28 100.0 32 ............................ TTTTTGAGCACATTTAACCTGTACATGTCTGC 2202808 28 100.0 32 ............................ AGTACAGTGATGAGCAGTGATGTCAGGTCGAG 2202748 28 100.0 32 ............................ GTGAAACGAATTAAGCTGAGAAAGCCCCCAAG 2202688 28 96.4 32 ............A............... TATTTCATAAGTAAATGTAAATTCAGTTTCAA 2202628 28 96.4 32 ............A............... ACCAAAACCAATACATCCTTTGAATTTTTCTT 2202568 28 96.4 32 ............A............... CCGCGTATGCGTCAGGTGCCGTTCAATATTAA 2202508 28 92.9 32 ............A....T.......... TTCGATCTTCGTAATCTGAATACATCTTCACG 2202448 28 100.0 32 ............................ TCTTGGTGCTTATTTCTTGTCTTATCTCGGTG 2202388 28 100.0 32 ............................ AGAATTTTGAATGATTCAACAGACCGGCTTTA 2202328 28 92.9 0 ............A.............C. | AT [2202312] ========== ====== ====== ====== ============================ ================================ ================== 14 28 98.2 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GAACTAGAAAAATTAAACATTTCCAAGTGGTTGGAGCGTTTAATGGATTATTTGCATATCACATCTATTCGAGAAGTACCTGAAGCAAAAATTTCAGGTTATGCAACCTATAGTCGTAAACAGGTCAAAACCAATGCTGAGCGATTGGCACGTCATCGTGCGAAACGTGGTGATATTGGTTTTGATGAAGCATTGGCACGTTATAGCAATGTAGTCACGACTACAGACTTACCTTATATTCAAATGAAAAGTTTAACGTCTGACAAAAGCTTTAAACTGTTTATCGAAAAGAAATCTGCGACAAAATCTGAAACTCAGGTTTTTAGCACTTATGGTTTGAGTTCAGTGTCGACTGTACCTGAATTTTAACCCAATATTTTTTTATTCTTTAACAGTTTAATAAAATCAATAAGTTATAAATGTGGGCTAAAACTTGGGTCTTTTATAGGTTTTAAGGTTTAACTCACTGTTATAACTTTATTTTTTGCTATAAAATTACT # Right flank : CTCAAGAATTATTCAACAAGGGGAGAGTATTGCCCAGTAAAGTACTTTAAATTTTTATATGTCTATAAAGTAGTTTGCTTATGGGTAAATAAAGAATAGTGTGGAATCACCAAACATAAAAAAGCCCCGATCTTTCGATCAGGGCTTTTCATATTCTGGAGCGGGAAAGGAGACTCGAACTCCCGACCCCAACCTTGGCAAGGTTATGCTCTACCAACTGAGCTATTCCCGCAATAGGACGCATTATAGAGAGTTTAACTGAACTGTCAACACTCGGTCATGCAAATTACATTTAATTGCTGAATTAATCAGCACGACGCCAGATTGTACCTTGACGGGTATCTTCCAGCACCACACCCTGATCAAGCAGAGACTGACGAATGTTATCTGCCTGAGCAAAATCTTTGGCTTTCTTAGCATCAACACGCTGTTGAATCAGATCTGCAATCTGTTCTTCAGTTAGACCTAAAGCTTCCTGTCCAATATCAGATTTTAAGAAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //