Array 1 180186-181627 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUMV01000005.1 Bilifractor porci strain Oil+RF-744-WCA-WT-13 seq5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 180186 33 100.0 34 ................................. CATCTGCATCAGCTGCACAGGTGAGTCAGAACTC 180253 33 100.0 34 ................................. ATCAGATCAGGAAGCAGCGCATCTCTGAACTCTG 180320 33 100.0 34 ................................. TCAACGGAATAAAAGTATTTCCGCTGTGAATATC 180387 33 100.0 35 ................................. CTTGATGCGTGTGACAACGATAGCACGGTTGTATG 180455 33 100.0 38 ................................. GTTGTGTTTGTTCAGGTTCGCAACCGCTGCTGCCGCAA 180526 33 100.0 33 ................................. TTTGGAGCCTTGCAAGCAGTAATAAGCGGGTAT 180592 33 100.0 34 ................................. TTTTTGCGGTTTCCACTTCCTTTTCGGATTTTTC 180659 33 100.0 34 ................................. TGCGAAGGAGTACAGCGATGTGACCAGCGAGCTG 180726 33 100.0 34 ................................. CAAATCCGCCCAGAATTATGCGTCGGGCATTGGC 180793 33 100.0 33 ................................. GGATGCTGTGTCAGACATGGTAGGGAAAATCCT 180859 33 100.0 33 ................................. CTTGTAAAGCGATATTTAATAAATTGCGTCAAA 180925 33 100.0 33 ................................. CCAGCTTCTGCCGGATCGTGGCGTCAGCATGAT 180991 33 100.0 32 ................................. TTTCCGATGGCATTATGTCACAGCGCGACCAT 181056 33 100.0 35 ................................. GCAACCTGAACTGCAGGAACAGGCCGGGCAATGGC 181124 33 100.0 36 ................................. TGCGCAGCTGCCCGCGAATTGGAAGATGTCTGTCCC 181193 33 100.0 36 ................................. CGACAATTTGCCGTCAGAGTCGGTGTCAGCTTCAGC 181262 33 100.0 33 ................................. ACTGATAGTGGTAAGAGAACCGATATATCTATT 181328 33 100.0 33 ................................. GAATGCGTTGAAATCTGTGACTGACGCCTCGCT 181394 33 100.0 34 ................................. TTCCAATAATGTGTACAGGCACGGTTGTGATTTG 181461 33 100.0 34 ................................. AAATACGGTTACGTCTTTGCCCTGTACCAGGCTG 181528 33 100.0 34 ................................. CATCCCTTCGACATTCATATACCGTGTCCCAGTG 181595 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 22 33 100.0 34 GTCACGCCTCGCGAGAGGCGTGTGAGTAGAAAT # Left flank : CTTTTGTTAAAAAGAACGGTAAAATAAAGGTAGAGCAGGAATTAGCAATATGATGGTTGTGATCAGCTATGATGTTTCTACAGAAACAGCAGATGGTAAAAAAAGACTGCGCAAGGTCGCAAAAGCGTGTGAGTCTCATGCACAGCGTGTACAAAATTCCGTATTTGAAGCAGATCTTGATTATTCTTCATTTATGAAATTAAAGGGAGAATTATTAAAGATCATGAATAAGGATACGGATAGTATGCGGTTTTATTATCTGGGAAATCACTGGCAGAGAAAAGTTGAACATTTTGGCATAAAAAAAGGATATAATCCTGAAGGTACTATAATTGTGTAAACTGATAAGCACATGGCGAACCAGATATGATTGAAATACGCTGGAAGGTTCGCAGAGGTTTTATCTGTTTTTGGAGAAAAATACCTTCTCAAATATAGTATAATTCCGCCTCTTTCGCTACATATGGGTGAGGATTGCAACTTTTTTGCAAAATGTTGCG # Right flank : TGAAAAACCAAATGTAGAGCCCCTCGGCAAGAAATTAAAAACGGGCATGCTGTTTTATGGCACACCCGTTTGTTATGTGATTTCCTTCCCGGAAGAATGCGGAATACCGGGACGGAAAATTCACCATTGCTGACGCCTGGCGCAGTTCACCGCCGGCTCAAAGCTTCGCGGCTGTAATGATAAATGGCTTCAATCTGTTTTGCGTTGGATCGTCTGGAAAATACAGCGACTGGTTTTCCTTCGCCGTAGAAATGAATATACTTCTCGACAAATCGATGCCCGGATTCCCAGGCTTCTTCATCTGTTACATCAGCCGGAAGGGGTTCCGGGCTGACGCCGAACACAATTTTGTCGCCATAAACGGGAATAAGGGAATCAAAGTCATTCAGAGGCTGTCCGTTCCAGATATCAATATCCGCCTTGTACATGGCAGGAACTAGCAGTTCGTTTTTCCCGCAGCAGTGGAATTCAAAAATCATGCCGTGCCGATGCGCGCTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTCGCGAGAGGCGTGTGAGTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //