Array 1 125099-124277 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FWIW01000003.1 Klebsiella pneumoniae strain VRCO0048, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    125098	    29	 100.0	    32	.............................	ACCGGCTCGCGGAAAACGCGGATCAGGCTGGC	
    125037	    29	 100.0	    32	.............................	TCATTCATAACAAAACCGCTTTTACTAGATGA	
    124976	    29	 100.0	    32	.............................	GCCGCCGAATCGGTGGACGTGGAGCTTAAAGG	
    124915	    29	 100.0	    32	.............................	CAACTTTGGACTAATTCGCATTTTATTTTTTT	
    124854	    29	 100.0	    32	.............................	GCGCCGGAATCCAGACCGAGATCAACCGCGAC	
    124793	    29	 100.0	    32	.............................	AAATACTCGCGCAGGTGTTCAGGCTGCTCTCT	
    124732	    29	 100.0	    32	.............................	AATTAAATACGGCAGAAACACTGGCCGCAGGA	
    124671	    29	 100.0	    32	.............................	GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA	
    124610	    29	  93.1	    32	.....T............A..........	GCGGCGTCAGGTGTGTGGCAGAAAATTATTGG	
    124549	    29	  96.6	    32	.......T.....................	TCTGACTGTCGAGGCATGATCTGCCCTCCGAT	
    124488	    29	  93.1	    32	A..................T.........	TGCGTCACGACGCCGGCGACAGTGACATCGTC	
    124427	    29	 100.0	    32	.............................	ACGGCCCGACAGAACGGCGCTGGAATCTCTCG	
    124366	    29	 100.0	    32	.............................	ACTGATATCACCGAACTGGCTCGGGCCATGAA	
    124305	    29	  75.9	     0	...........ATTC...A......G..C	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  97.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAATCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  GTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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