Array 1 207177-206782 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOMJ01000006.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 207176 29 100.0 32 ............................. ATTTTGTCGGCGATGACGGTTCGTGTCGTTCT 207115 29 100.0 32 ............................. GCAACGCGGATTGCAGCCCTGATCGCGGCCGC 207054 29 100.0 32 ............................. CGGAGGTGCGCGACTGGTGCGACCAGGAGCTG 206993 29 100.0 32 ............................. GTGGAATCGTTCAATATCCTGGCGCCGCCCGA 206932 29 100.0 32 ............................. GGCGAGGAAGAATCGAAAGCCCTGGCCGATGC 206871 29 100.0 32 ............................. GTTAAGAAGCGCACCGGCGGCGCCGTGGCGCT 206810 29 93.1 0 ..............G......A....... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTGTTCCCCGCGCCCGCGGGGCTGAACCG # Left flank : | # Right flank : AACTGAATCTGGGCCGCGAAGAGCCGGAATTGGTGTCCCCATGCCCGCGGGATTCCAGATCCATAAGGGGCAACAAGTAATCGGGGGGCATCACCCAGGGTGAGCGAGATGTGGCGCTGGGGGAGGAAGCATCGAAAGCCGCCGCCCCGGCCCGATGGCCCGGCGCCGGTTATGGGGAGCGGCCCACCGACGCCATCGCCCCTTCAAAGTAACAGAGAAAGCTGTTGCTATTCCAGCCGCTCCACCCTGGTGACCTCCTCGCCGTCGTAGGTCACGGCGCGGGCGTGGCGGTTGGGGTCGGGGGCGTAGATGGCGCGCTGGCCGATGGTGGCGCCCCGTTCATTCACCAGATTGTAGGTCCGGTCCGGCGGGCCGCAAGCGGCGCGAACCTCGCCACGGGTGTCGCCGGGGCGGACGAGGTCGTTGCCGCAACGCAGGCTTTCGGCGTGCGCCAGGGGGATGAGGAGGGTCGCCGTAAGGGCGGCGAGGGTGCGCTTCCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCCGCGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.91 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 645-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOMJ01000005.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 644 29 100.0 32 ............................. CACTTCCGCTTGATCGACTCCCTGGAGCTGAC 583 29 96.6 32 ............................C ACCTGACCTCCCGCTCTGATCCGAATGCGTAC 522 29 100.0 32 ............................. GCTTCGACCGTAGCCCGACAGGTAGCCGTGGG 461 29 100.0 32 ............................. CGCATCCGCCGCGCTGGTAAGCGCGGGCGCCA 400 29 100.0 32 ............................. TTAACGGGGACGCGCCACCAACTACCGTCGAT 339 29 100.0 32 ............................. TGACGCTATCCGGCATCAATCCAGACGTGCTA 278 29 100.0 32 ............................. CCGCCGCTCCACTTCCCGCCGGATCTGTTCAT 217 29 96.6 32 A............................ AGATAAAGTTGGCCATCGTTAACTACTCCCTG 156 29 100.0 32 ............................. CCACAGAGGAAGAGGCGGCGACGACCGAGACC 95 29 100.0 33 ............................. GACACCGACCACGAGGTCCACAACGACCTCGAC 33 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 11 29 99.4 32 GTGTTCCCCGCGCCCGCGGGGCTGAACCG # Left flank : GCCACCGGCACCAGCCCCCGAAGCGCAGCCACCCGCGATCCCGGAAGCCGAGTCCATCGGCGAAGACGGCCACCGGAGCAAATAGCATGGCGATGGTCGTAGTGGTCACCGAGGCCGTGCCGCCCCGACTGCGGGGACGATTGGCCGTCTGGCTGCTGGAGATCCGGGCCGGCGTCTACGTCGGGGATGTGAGTCGTCGCGTGCGTGAAACCATCTGGGAGCAGGTGAATGCCCTGCTCGAGGATGGAAACGTCGTGATGGCCTGGTCCAGCCGGCACGAATCCGGTTTCGAATTCCAGACCTGCGGGAAAAATCGACGCGTGCCAGTGGATTATGAAGGTCTGCGGTTGGTGCGATTCGCACCTGAACCGGAAGGGGAGGACTAACTCCTTGAAAATGAAGCGCTCTTTAAAAAGTTGGAAAGAGGCCAATGCACCGGTGTTGCTGGTGCGGTTTTGCTTTTCCTGTAAGGCCTTTTGATTCAGGATGTTGGAGGAAGT # Right flank : GATTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCCGCGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //