Array 1 150609-149559 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXYX01000002.1 Microcystis aeruginosa NIES-88 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 150608 35 100.0 43 ................................... CGAATAAGATTCCGGGTTTTGGCAAATAAATTGCCGTCATTGA 150530 35 100.0 33 ................................... TAGAGTTTTTGATCATGCGAAGCATACCAACTA 150462 35 100.0 36 ................................... ATTTTTCTCACTCAGGCTTGGTAGCCTTTTTCTTTT 150391 35 100.0 36 ................................... GGTCTAGTACTGATTCTTGTCGGCGTTTTGCCGAAA 150320 35 100.0 37 ................................... GGGGCTGTAATCAATTGGGTAATTTGAGCGCCGATTT 150248 35 100.0 36 ................................... CCAGAAGCTGAAGCCCTTAATTTCTGTCCCGGTTTC 150177 35 100.0 35 ................................... TTCAAGGGGGGTTTTGCCTGTTGCCAACCAGCCTC 150107 35 100.0 40 ................................... TTTGCCGTTCATGCAGTTCAGGGTTGAACCGCCGGAACCA 150032 35 100.0 38 ................................... AACGCTATTTTAACCAGAGTGAGAAAGGTTTCTTTTGT 149959 35 100.0 37 ................................... AGCTAGTCGTTGCTATCGAGGTCATATACTACCACAT 149887 35 100.0 46 ................................... AGTAATATCTCGCCCTCTAGACAAGGTTTGAGTCGTTGCAATTTGA 149806 35 100.0 34 ................................... CCAGAACTGCAAGAAGGTGTTCTTTGAAATCGGG 149737 35 100.0 35 ................................... GTTGAGACACCGTTCTTGAGACCGTTGTACTCATT 149667 35 97.1 39 ..................................A GATGTGTAGGGTCAATTCATGAATTAACCCTACAATTTT 149593 35 80.0 0 T..AA........A..T......C.....A..... | ========== ====== ====== ====== =================================== ============================================== ================== 15 35 98.5 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ATTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCCAAAAATTGCTCCTTCCAAAAGCGATCGCACTCCCCATCATCAAAATCGCCAAAAAAGTTGCTTCTCCCAAAAGTGATCGCTATTCCTCATCATCAAAAAGCGATGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGAAAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATCAGTGATCAGTGATCAGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTCATGACTGAGGTGACTATTGAAAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : GATGCTTAATTAAGAAAAATCAATGAAAACAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTATTAAACAATCGAGTTTTCTATAGCTTTATGCCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAATCGATAGCGAAATGCAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAATA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 153221-152886 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXYX01000002.1 Microcystis aeruginosa NIES-88 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 153220 35 91.4 38 TA.....................C........... GAGGAATGTTAAAACATTCCTTTTTATTTTCCGTACAA CA,C,A [153210,153213,153216] 153143 35 100.0 42 ................................... CAAAAACGCTGCCCGACCCGACCTTCTGTGGGAAAACGATAG 153066 35 100.0 39 ................................... GTGCCACTAAGGCCACGGGTAAAGGGAGCAGTTAGCTGA 152992 35 100.0 37 ................................... CCAAAAGGATTTTGAATCGCATCTGGCACATCAAAAG 152920 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================== ================== 5 35 98.3 39 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : CTTCTTAGAAATAGATACGATTGATGTCGTGCTTGTCGGTAGTGGTTCCATACGAGGTAAAGAATTAGGGCCTGTGGTCACTCTTGAAGATCTTAAGAAGGTTTATCCGTATGATGGTTCTCTTTATAAAATTAAAGTTACTGGAGCGCAACTGACAAAGGTATTTACCCATTTTCTGCGCCCGGAAAACAGAAAGCCTGGGGAAAGTCAATGTTATCAAATCAGCAAAGGTGTTCGAGTAGTTTATAACAATACTAAGAAAGCAATTGAATCTTTCAGTATTAATGAACAACCTGTAGAGGCTGATCGTTTATATGTAATCTGCGTGCAAGATTATCATTATCAAAATTCGCTGAAGAGTTTGAATCTTACGCCTGAAGAAATAGCTAACGCTAAAGTTGTTACTACTTCAAGCCAAGGTGTTCTTGAAGAATATTTAAGTACTCATCAACTCCTTGACGGTCAGGTGGAAGGACGCTGGACTTTTGTTAACTAGAGTT # Right flank : AGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGGGACAAAAATTTCAGAGGAAGTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCCGATCCACAACTCAACTCGATCGATCTCGATTGAGTTCTCCACTGGCTACAAACCCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCCAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGGA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 215884-212445 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXYX01000002.1 Microcystis aeruginosa NIES-88 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 215883 37 83.8 35 .AAG.......G.....G..T................ GAGACGCGCATAGCCGATCGCATTAATCGAGCGTT 215811 37 83.8 36 .AAG.......G.....G..T................ TTCGGCATAACTTTAAGCAAAAGCTACTATAGTAGC 215738 37 83.8 34 .AAG.......G.....G..T................ GGAAAAGTCTAAGTCCAGTGACAAGGTTGAGGCG 215667 37 83.8 34 .AAG.......G.....G..T................ AATTACACCCGAGTTAACAACGGGCGATCAAATC 215596 37 91.9 34 .AAG................................. TTTAAATATTTCTGAAGGTGAAAGATTTTTTAAT 215525 37 97.3 35 .......................C............. CCCTTACCTCACCGGGGATCGTGTCGGTATCACGT 215453 37 97.3 35 .......................C............. AGCATCAGGAGGGCTATTAAATACTATTCTATCAG 215381 37 97.3 37 .......................C............. TCTTTAATCATTTTCTGCAATTCATCCAGTTTTGAGT 215307 37 97.3 35 .......................C............. ATGGTTGACGCTCTTGACGGGGTAAAATCTGACAG 215235 37 97.3 36 .......................C............. TTTTGACAATGACATCTTACCTGCCCCAGAGCTTGA 215162 37 97.3 37 .......................C............. AAAACTACAGGCCAAATTAAACCCCGGGAGGTTGCCC 215088 37 97.3 37 .......................C............. CTCTACCACCCCATCTACCCAATAAAAAACCCGCTTG 215014 37 97.3 34 .......................C............. ATCTACAGGATATAAGTACCTAATGATCGGTCAA 214943 37 97.3 36 .......................C............. GGGGAAAGGTGATCAGTGAGGCTGTGGCACAGCGCG 214870 37 100.0 38 ..................................... TTGGTACGGTGACGACGGGGACTGCTGCCGCTACAATT 214795 37 100.0 36 ..................................... GCCACCCCATTAATCGTAATGGTGATTAGAATCATC 214722 37 100.0 35 ..................................... ACCGTTGCAACCCGCTCTAGGACTGGGTTCCAGAC 214650 37 100.0 35 ..................................... ATGTGGGAGAAATTAAATCACTTGGTGGCGAAAGC 214578 37 100.0 36 ..................................... GAAATTTTGTATTTATGGGTTTCGATGGAGACTACA 214505 37 100.0 35 ..................................... TTATCTAATTACCCGCAAAAAATAGAACCGCAATC 214433 37 100.0 34 ..................................... AAAAGGGGGAACTAAAGAGTTATCCCGTTCGCCT 214362 37 100.0 35 ..................................... CATCGCAATAATTCTTTCAGCGGGCAAATTCGATA 214290 37 100.0 36 ..................................... AAAATCATTATTTATAATTCTTTTATTTTTAATTTT 214217 37 100.0 35 ..................................... TAAAAGATTTGACATTATCACAGTACAAAGAGTCC 214145 37 100.0 36 ..................................... TTAATACCTTCTCGTAATCGAGACGTTAATCCTGAT 214072 37 100.0 35 ..................................... TAGCGGCATCGGTGGAAGGGGCGGTGATGTTGTAT 214000 37 100.0 33 ..................................... TTCTGGAATACTTCGCTAGGGTTGCCCTACGAT 213930 37 100.0 38 ..................................... GGACCACCGGTATCAAAAGCGAGGCGAGGGGAATAAAG 213855 37 100.0 40 ..................................... CCAACCTACTCACAGCCACCTCAGTCCACGGGCGACCCAA 213778 37 100.0 34 ..................................... TCCAAATTTTTCAGGCGAGAACCCGCCTCCCAAG 213707 37 100.0 35 ..................................... TTTAAATCACCGGCAAAATTTTGCCAGACTTTCTC 213635 37 100.0 35 ..................................... GTGGTATTCTTTGGTGAGGGGGATTCCTTCAAATT 213563 37 100.0 36 ..................................... GCTAAACTGCCCAATTCGACACATTTGATGGCTATT 213490 37 100.0 36 ..................................... CCGATCGCTTTTAAGAATTCCCCCAAAGCTTCCGGG 213417 37 100.0 34 ..................................... ACCTCATCATCATTAAAATTGATCACCTTTTCGC 213346 37 100.0 35 ..................................... TTCCCGGGGGGACATCTCACTTTGTCGGGTGCTAA 213274 37 100.0 35 ..................................... AACAGAAATATTGCTGATTTCGCCGCTATGCCACG 213202 37 100.0 37 ..................................... AAGTTTTTTCAGATTGCGCTTTCTTCCCCCCATAGGG 213128 37 100.0 36 ..................................... ATAAGCCTTGCTCCTATTGATTTTCACTCTTTTATT 213055 37 100.0 36 ..................................... CTTAATGATGAAGCTCACCACGCTTACCGGATAGCT 212982 37 100.0 35 ..................................... TTCATTATCGTCTGCAAAAACACGAAAATTGCCAA 212910 37 100.0 35 ..................................... AAAGTCTCGCGCTCGTACAATTCCCTAGCGCGGGA 212838 37 100.0 33 ..................................... AATTTATCTTGATTTCCGAGTGTGAACTTGATG 212768 37 100.0 33 ..................................... AGTGCTGAGATTGAGCAAAATATTCTTAAACTG 212698 37 100.0 35 ..................................... TCAGGGTTTTTCACTAACATGATACTAACTGTATA 212626 37 100.0 38 ..................................... AAACAAATCATCCAAGCTGTAACCAGTAAGCATCTCGT 212551 37 100.0 33 ..................................... GCATTGTTTCTAGTTTTCTCCAGATTTCCCCTT 212481 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 48 37 98.0 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : AAATATTTTGATCCGTGGCTTACGAGATGAGTTTTTGAGAGCCATCGGCTCTTTATACAAGTTTCCCGTCTCTATGATTGGAAAATACCCTGGTTTAGCAGGGGAATTTACGCCTGATCTTGATGCGAATCAAGAGTCTATCGGGGATGCGCCGATAGAGAATGCCGAACACTCGATTAGTAAGCAGATGAAGCAGGAAGGGAATCGCACCCCCACTCAGCCCGAGAATGGCTCGCAATCCCTTATTTTTCTTTCCGCCCCACCTCAGCCGTGCGGGGATAGCCACGGCACAAATAACCCAAAAGCCTTACCCAATAAGGCATCTAAGCGAAGTTCCAAAAAACCACGGGGCGCAATCCCCGAAAACCCCGACCAGCTTACGATCTGGGATTTGCTAGACTGATTTTTTGAACCGAGCAGAACCTTGAAAACTGAATTTTAACGAATGGGGCGCAATCCTTACCTGAAACCCTTTTACATCAAGGGCTAAAGGAAGATGG # Right flank : TTGATAAAATTTAAGATAGTCTCTAGGGAGCATCTCACCTTTGCAATAAGTAGAAATGCTTAATGAGATCAATAAAAAAGTTAAAAAAGGCAACCATTTAGATAAGCACAGCGATGACGAAGGACTTGCGGTACATTACAAGATTGCCAACTTGCACCAGTAATTTTAAGACGATGAGCAATTTGTTTAATTTTTGATTCGACGGAGCCAGAGCCAATGGAAATCCCCTCTGCCTGCAAATAACCATAATTGACAATTCGATGTTTATGCTTGTTTAAATAAGTAATAAAATTCGGTTCTTCGTTACTTGGTATGGTTCGATCAGGGGACAGAAATCGGCTAAATCCTTATCTGGCAAAGGACTTAATTGATTAGCTCGTTCTAGATTGAAAACAATTGGCAAAAATCGAAGCAATGTCTTTCTATATAAGGGTTTCACCCCTTATAACTCCCGTCCATTACATAACACAAACCGAAGAACCAACTTTATTTTGAAGAGT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA //