Array 1 1409768-1409071 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012889.1 Porphyromonas gingivalis 381 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1409767 36 100.0 30 .................................... TTTAGAGTGGTTTCTAATGCTTCTAGTTTT 1409701 36 100.0 30 .................................... TACCGAAGCCACTGACCCAACTACATTATT 1409635 36 100.0 30 .................................... TTGTCATAATATTTGTTGTTTGTATTGTTT 1409569 36 100.0 32 .................................... ACTTTCTATCTTCATTAAAGAATGCTACACCT 1409501 36 100.0 30 .................................... TCTTCGTTTTTGCCGCACGGGCGTTTCTTT 1409435 36 100.0 30 .................................... ATGATTCGCTATTTTGTCCCCGTTGCGGGA 1409369 36 100.0 29 .................................... CATGCTGTATTTTTATTATCATACTGAAA 1409304 36 100.0 30 .................................... GGAGATGGCGTAGAGGCACAAAGAGCCTAC 1409238 36 100.0 30 .................................... TTCATCAAGAATTTGTTTTGTTAGAGTTCG 1409172 36 100.0 30 .................................... TTAGTAGCAATAACGAAGAAGTGTCTTAGC 1409106 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 11 36 100.0 30 GTTGGGAATACCCTTAGTTAGAAGGGTGGAGACAAC # Left flank : CAAAGCTACGTTGGATGAAGTCAAGACTTTGTTGGGCGAATATGATCGCTGCCGCATCAAAATCTTCGATTGGGCATTTGCACTCGAAGGAGCCATCATGTCTGATCGCGACTTGAAGCCGTATTTGCACGAGTCGTCGAGCAGGGAGGGTAAGAGCGGAGAGCATTCTACACTGGTGAAGATGCTGGTGGAGAAGAAAGGCTGTCTGACTCCTGACGAAAGCCAATACCTGATTCTGATTCGCAACAAGGCTGCTCACAACCAATTTCCCTGCGCTGCAGAAATGCCTCTTATTTACCGAGATGTGAGTGCAAAGGTCGGTAGCATTGAGGGATCTTCTGCCAAAGATCTGCCGGAAGGTAGTTCTCTGGTAGATTCATTATGGAAAAAATACGAAATGATAATTCGGAAAATTCTTCCGATTCTCGACCCTGAAAATAGATTTTTTGGAAAGCTTTTGAATAATATGTCTCAACCTATCAATGACTTATAAAGGGTCG # Right flank : TATTATTCCGAAAGGAGAAAGAGGGGAAGTTGTGCTGTTGATGGGGAAGTATTTCTAAATTAGCGATCGCTAAAGTGATGGAAAATGGATAGGGGGATCGTGTTCGGAGGAGAGGGTTGTAGCCGACAGTGTTTGTGTGCAGCTATCCATTCGATCGGGAGGCCTTTCGTTCTCTTCCTTGGCTTTTGTCCGTAAATACCGATTCTTTTAACTCATATAATTGTTTGTTCCTATCAAACGCTCTCATCTCCTTATCAGTGCTGCTTCATCGGGTGGTGGAAAGACTACTTTCACGCTCGGATTGCTACGATTGCTTCGAAGACGCGGTCTCAAAGTGCAGCCTTTCAAATGCGGTCCCGACTATATCGATCCTAAGTATCACCGCCTTGCATGCGGAACGGAAACGGTGAATCTGGATGCTTTCATGATGAGCCGGGAGCATATCGCCGGACTCTATGATCGCTATGGCTGCGAAGCCGATGTTTCCATCGTAGAGGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAATACCCTTAGTTAGAAGGGTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1837203-1837502 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012889.1 Porphyromonas gingivalis 381 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1837203 36 100.0 30 .................................... CGTTACTTCGATGAAGACTACAACGAAACA 1837269 36 100.0 30 .................................... TAATAAGGTAAAATATAGTAATCCTTTGCC 1837335 36 100.0 30 .................................... GTAAAGAAGAAAAAAGATTAATTCCACTTG 1837401 36 100.0 30 .................................... CTACTCGTGCTACACGAGTTAGTAAATGGA 1837467 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC # Left flank : TATATCGTTTTCATTTTGTATATAAATCATTTTTAATTTATATATAAATCGATTGGGATAAATATATAGATTGTAAGCCCGATTTGATATAAATCGGGCAGCTCAAAAGGCCTTTAGGGGAGGTAAATAAAGAGGCACCCACCGAGTTCCTGCAGGAACTCGGTGGGTGCCTCATCTATTTCGAAGGGGTACGAAACGGCTCTCAAGCTCTACCGCTCATACAGCAGGCTTGTATCAGCCATACGCGCCGGCATATAACCACACAGGCCGAACGAAACCGGCCGAATAAGAATGCAGGGAAGAGAGGGATCGGAGCACATATCTATCATTCATTTAGTCGTTTACAAAGTCATTCCATAGAAAGGGAAAGCACTCCCCGGTACAAATTCACCGAAGAGGGGAGCAGCTTGTCCACCTGCAAATGTAGCGAAAAAGCCCAACGAGGAAGAATCCCCACACTACTGCACATTCCAACGTCCAAGCCACCAATCAAGAATCAT # Right flank : CCTACCCCCATCGAATTTGAAACCGATTGAGAAGTCATCATTCCACAGAAAGTGAGTGACGGTAAGGCTTTGGAGCCACTGCAAGCCGGCGAAAAACAGTCTGTCATCATCATTTTAGTGGGATATTAGGATTGAAAAAATGACTCTCTACGGTCGGGTTTATGCTATTTTCTCTCAAAAAATCATTCCTATGCTCCTGGCGGTTCGCACTCAAAAGTTCAACGTTCGCTTCTTCAGTGCGATGGCTTCTCTAACGGTTTGGGTAAGCTCCTGATGAATGCTGATCATCCGTTCGGCCGTTTCGGGCTTGTTTATCACAACCCTCTCATCCGAGTTCTGCCTCTCCGAAAGCAAAAGGCCGTAAACGATACTTCTATACTCAAAGATACGGGAAATAATCTCTTTAGACAAGAAAATACCGTTCCCATTCTTATAAAATTCGTCCGTCAGTTCGGACAGGAATCCACGGATGCAGGCCGGCCTGAAATAATAGGTTTTCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 2205469-2213348 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012889.1 Porphyromonas gingivalis 381 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2205469 30 100.0 36 .............................. AAACGAAATGAAAAAGACAACAAACAGAAGACCCTC 2205535 30 100.0 36 .............................. GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA 2205601 30 100.0 36 .............................. GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA 2205667 30 100.0 36 .............................. TCCGCGCCGCGAGGTGGAGACCCTGCCGGAGGCGAA 2205733 30 100.0 37 .............................. CCTGAGAAAGAGGGGAGGGAGGAGCGATAGACGAAGT 2205800 30 100.0 36 .............................. CGAGAATCTATTGAGTAGCGAAGTCGTCACAAAGAT 2205866 30 100.0 36 .............................. AGCCATAGCTCTTCAATTTCAATTTCTTCTTTTAAT 2205932 30 100.0 36 .............................. CGAAAATAACAAAAATAGATATATTTATAAAAAAGA 2205998 30 100.0 34 .............................. ACTCTTATCATCTACTATCTCAAAAGCTCTTTTT 2206062 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2206130 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2206196 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2206264 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2206332 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2206398 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2206466 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2206534 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2206600 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2206668 30 100.0 36 .............................. ATTTCTTCATCTCGCGCTTGCTCAAAAGCGCGTTCA 2206734 30 100.0 34 .............................. TGCATCAAGTCACGAACTTTCTGCGAGATGGAAA 2206798 30 100.0 36 .............................. CCGTCTCGAAAAAATATCGGGACGTTTTTGTTTTCT 2206864 30 100.0 35 .............................. CTCCTTCACTTTGTCGACAATGTGCACTGTATTTG 2206929 30 100.0 36 .............................. AGGCGGAGTATCTCTTTGCCACCCAGTCCGCGCGCA 2206995 30 100.0 36 .............................. CGTAACCGCCTCGGTAGACCGCTCCGCACGGTCGTT 2207061 30 100.0 37 .............................. GTGCATTCCGGACAGCTTTCGCTTAAAAAGTTAGCGG 2207128 30 100.0 37 .............................. AAGAACGAACGCCTGCGCGATAAGCACCGCGAGCGTA 2207195 30 100.0 36 .............................. ATTTACCTGCAGACTTGTGCCCACCCACTTGATAGA 2207261 30 100.0 36 .............................. TGGTCACGGAGCGATACCATGAGTGTTTAGTAGATG 2207327 30 100.0 36 .............................. CGGAGGAGATCAGCTATGCGGATGATACCACCCGTG 2207393 30 100.0 36 .............................. TCAGAAAACTCGCGTCCATCTGATAGATGTACACGA 2207459 30 100.0 36 .............................. TAAACGATCGAGGCGCGGAGACCCTCCTTGCCAGTA 2207525 30 100.0 37 .............................. CCGTTCAGGAAAAAGTAACCGAGCTGAAGACCATGCT 2207592 30 100.0 35 .............................. AGGTGCTATCGCAGGACTGCAGGACATCCTCAATC 2207657 30 100.0 36 .............................. AGCCGCTCGACTTGACGCCATGCAAAAACAGATAGA 2207723 30 100.0 36 .............................. TCTGCGAGTTGTGAGAGGCAATAAACTGCTGGGAGC 2207789 30 100.0 35 .............................. ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA 2207854 30 100.0 35 .............................. TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG 2207919 30 100.0 37 .............................. GGGAAGCTGCTTTGCTCGCTGAGATAGCAGCACTTCA 2207986 30 100.0 36 .............................. TTTATTGACGCCACCCCGCCGACGAAAAAAAATCAT 2208052 30 100.0 36 .............................. TTTCGGTCTTTACGTTTGTCGCCACGGATACATGCT 2208118 30 100.0 37 .............................. ATTGTAAATAAATTACATGGCTATTGAAAAACAAATT 2208185 30 100.0 36 .............................. GATTGTACGACTTTGCTATAAAGTCTGAGTTATTAA 2208251 30 100.0 36 .............................. TATCAACAATCACCGTCATATGTGTAATATACTTGA 2208317 30 100.0 36 .............................. GGGCAGGCGTATTGCCCCACTTCTCCCCGAATGCAT 2208383 30 100.0 36 .............................. TGAGGAATCATATCAGTGTTTATTTTTTCATCGATT 2208449 30 100.0 36 .............................. TGGAAGTGGGTAGAAGAAAGCCCCAACGTGTTTAAG 2208515 30 100.0 36 .............................. CATGACAAAGAGACGGTTATCGGTAGAGGACAGGCA 2208581 30 100.0 35 .............................. CGCGTGGAAGGGGCATGTACACTTGTAGTTCGCCC 2208646 30 100.0 34 .............................. TGACAGGCCCTGCAGCGTGTGAGAGCGGAAATGC 2208710 30 100.0 37 .............................. ATTTTCAATCATGATATTTTATTTTTCCTGCAAACGC 2208777 30 100.0 36 .............................. TCGCATGTGGGAGCGCGGCGGTCTCTGCTTTACGAA 2208843 30 100.0 36 .............................. TCAGCGTGATGAGCGCTTGAGGCTCCTCCATCGAGT 2208909 30 100.0 36 .............................. AAGGATGATTTGGAAAATTTAGTAAGATAGTTGATA 2208975 30 100.0 37 .............................. TTCTTGGAGAAAGCGAAGACCATGAACCTAAGCGTCG 2209042 30 100.0 36 .............................. GGAAATATAGTTATTGTATCTACTAAAAGACATAGT 2209108 30 100.0 34 .............................. ACCCCATCTTGCAGAGTATATGCGAGCAAAATTT 2209172 30 100.0 34 .............................. TAGTTAGCACAGTTGCTACTATCGTAGTAGCTGT 2209236 30 100.0 35 .............................. AGATAAACTTTCTTCTCGAATTAAGAAAATCGAGA 2209301 30 100.0 36 .............................. CCGCGGCCATCGAGGCCACCGCCTCCGTCCTCCGCG 2209367 30 100.0 37 .............................. TATGAAAACAGAAAAGAACTTCTCAGCCCTGAGTTTG 2209434 30 100.0 37 .............................. CAAACTCAATGATTATCTGTCAAGAAGCAAGAAACGA 2209501 30 100.0 37 .............................. AGTAAAAATTACCCTAGATGCCGAAACGGACGGCCTT 2209568 30 100.0 36 .............................. CAGAATTTGCACGAACAGTATGATGTTCGTGTTCTT 2209634 30 100.0 36 .............................. AAGCGCGAGACAGGCCGAGCCGGCACAGCTTAGTGC 2209700 30 100.0 36 .............................. AAAACGGCGATAAAATAGCGTTCGAGATTTTCCGCA 2209766 30 100.0 37 .............................. TAGTTGTAGCGATTGTCTCAGTTGCATTACTCCTTAC 2209833 30 100.0 37 .............................. AAATAACGAGAAAAAGAATGCTTAAATTGTTCTTCGT 2209900 30 100.0 36 .............................. AGAAGAGGGTAAACTATTTGCTAATCTTGAATGCTT 2209966 30 100.0 36 .............................. TCTCAATATCTTTCATAGCTACTAAAAATTTACGAA 2210032 30 100.0 35 .............................. ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA 2210097 30 100.0 35 .............................. TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG 2210162 30 100.0 36 .............................. TGCCCCCTCACCCATCTAACCTCGAGCCGTTGAGCC 2210228 30 100.0 36 .............................. GATTACATAATGATAGACGACAGAGATTGTGCAGAA 2210294 30 100.0 35 .............................. GTACTGATAATTACGCTGCAAGGTCAGACGGTGAT 2210359 30 100.0 36 .............................. TTGCCAGGGCTTGCTGATGCGCGCGCTCCAGCTGCT 2210425 30 100.0 36 .............................. ACAGAACCAGCTCCGTCAAATCTCCCGCTTTTTGTC 2210491 30 100.0 36 .............................. TGCCCCCTCACCCATCTAATCTCGAGCCGCTGAGCC 2210557 30 100.0 36 .............................. TATTCATTCGCTCAAGCGAGGGCATCCTGCTGCAGC 2210623 30 100.0 36 .............................. GCTCGCGGAGGGAGAGGGTGCCGGTATCCTGCCTCC 2210689 30 100.0 36 .............................. AGAGTCTGTATGTGAAAGTGTAGTTCGAAACATTAT 2210755 30 100.0 34 .............................. AGAATACTTTGAAGTTGTATTCAATTACTTTGAA 2210819 30 100.0 36 .............................. CCGTTGTGACAGAGCTGCGCCGTCGTGGCTATGATG 2210885 30 100.0 36 .............................. TGAAAGCCCGAAGATAATCTACACGCAAGATTGTTA 2210951 30 100.0 35 .............................. CGTCATCAGGTGGATATTCTTACTGCTATCCACGA 2211016 30 100.0 36 .............................. TCGTCTGCGACGTATCGCAGCTCTGCCAGCTCCGCG 2211082 30 100.0 36 .............................. GCATCTTCGCAGGAAAGAAGAAGGCTCCGTCCTCGA 2211148 30 100.0 36 .............................. AACAGTCAAGGGGGAGCCGACCTCTCCGGCGGATTT 2211214 30 100.0 36 .............................. GCAGTGCGGCCGACAAGGCTAACCTCGCTCAGCTGA 2211280 30 96.7 36 .........T.................... AATCCATGTTCATGAGGAGAGGATACGAGTTCTATT 2211346 30 100.0 35 .............................. CCTTTTGCTATTGCAGCAAACATATACAATAATAA 2211411 30 100.0 36 .............................. ACTTCATGGATTTAGCGAGATACTCATTATAATTAA 2211477 30 100.0 36 .............................. TCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA 2211543 30 100.0 37 .............................. ATCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA 2211610 30 100.0 36 .............................. GCTCAAGCGTCCAAGAAAGTTCAAGAAATTGTACTA 2211676 30 100.0 37 .............................. TACTATGGTGTCTGCATTTGAGATACGCAAATAGCAA 2211743 30 100.0 36 .............................. CCTCAATATCTTTCATTGCGACGAGAAATTTGCGAA 2211809 30 100.0 36 .............................. AATCTATGATGATATAGAAGAAGACGACTTGTTGTT 2211875 30 100.0 36 .............................. ATTAATGATTTTCTGAAATAAAGAAGCAGTTGCATA 2211941 30 100.0 35 .............................. CTCAATATCTTTCATTGCGACGAGGAACTTGCGAA 2212006 30 100.0 36 .............................. CCCCGTGGTAACTCATACCACCGACTATTCCACCGT 2212072 30 100.0 36 .............................. TTTGAGTAATCATCGAATAATTATCGATTAATCATT 2212138 30 100.0 36 .............................. TTATATGCATCATATTCTTAAAGTATTTTATTTGAA 2212204 30 100.0 36 .............................. GACGAATACGGCGTTCATCATCGATAGTCGCGATGC 2212270 30 100.0 36 .............................. CGGGCGGCCAACCGGTCACAACAAGAATAGACCGAT 2212336 30 100.0 35 .............................. TTCCTTCCAGTCGCAGCTTAAGATACTGCGACTAC 2212401 30 100.0 36 .............................. AATTTTCATCAGAGCATAAAAAAGGGCAAACTTTTT 2212467 30 100.0 35 .............................. GATACGAGCACCAAGGCTGCGATACCGATTGCGTA 2212532 30 100.0 36 .............................. CCTCGAGCAGATCTTCCTGCTCTTTGATGAGTGAGG 2212598 30 100.0 35 .............................. GCAGGTTGATTATAATGTTGAAGATGCTTTAAGGG 2212663 30 100.0 36 .............................. CTCGTATCGACTTTCAAGCAGGCTGGAGTGCAGCCT 2212729 30 100.0 37 .............................. AATATGAGATCGGAAACAATTATAGTTGCGTCGATAT 2212796 30 100.0 37 .............................. TCACAATAACCGACAAAATGTCTCGCGTAACGTACAA 2212863 30 100.0 35 .............................. GTCGCCTGTTTTCTTGAACTCCTCACTGATTCGTA 2212928 30 100.0 35 .............................. GATGGTGTCGACATCATACGACAATAGATCGTCGA 2212993 30 100.0 35 .............................. GATGGTGTCGACATCATACGACAATAGATCGTCGA 2213058 30 100.0 36 .............................. AATATTTTTTCAAAAATTGTAAAACTTATTAAGTCA 2213124 30 100.0 36 .............................. AAGTTGCTGATTGTCTTAGAATGAAAGGTTATGCTC 2213190 30 100.0 35 .............................. ATAATATTACATAATGGCACACTGATGGTAAACTT 2213255 30 100.0 34 .............................. CATGATGTACAAATATATCATGATCGTATACTAC 2213319 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 120 30 100.0 36 GTTTTAATTCCTGTATGGTGCAATTGAAAT # Left flank : TAGTTTGTCCATGAGCCCCAACTCTGTCAGTGCCGAACGAAATCGACTGATGGTGCTGTGGTCGGGAGATACCTCTTCCATCTTCAGCCCCAAGAATCGGGAAAAGGTGATTGAATCATTGATGCGCTCCTCCAAAGCACAATCACTGAGGTTGTACCATGTCTCCAAAAGCAACATCTTGAATAAGAGAATCACGTCATAAGCCGGGGCGCCGATGGCATTTTGTCGCTTCGTGTATTTCTTGTTGATCAGCGTCCTGATCGGACGCCAATCGATAAGCGTGTCAACCTGATTGAGGAAGTCGTTTTGTGCTTTGCGATAACGCTTTGAAAGGAGTGCGTCTGCAAATGTTACATGCTCATCGGTATTCTTGGATTGGTATGCCATGGGAGGAATATTATGCTGTTTTTAATACTCAAATATACAAAACAACTCCCTATTATACAATGAATTAACAAACAAAATACACACCAATCGCCGTGCAAAGGTCTCCATATATC # Right flank : TCCGTTACAAATATAGGCTTTTCTGTTTGAATGTGAGGAGTTTACGAGAAGGTGAAACCCAAAATTCAGACATTCATAGTTGTCGATGTCTGATTCTATGAAAAACCAAGGGGTGTGACGACTGATATATTTTATTGATTATCAATCATTTCAAAGATCGCCGGAGGTTAATCATAACAAAAGGCTTGATGAATTTGCTCGAATCGACGCTTCAAAAGATAGATAGCGGGAGCTGTATCGTGCTGTATTATAGAAATATATCCGTTGCAGAACGCTCTTTGCCAATTATTTCTTTTTCCAACCAACGTTCTTGTCTGGAAGAAAATATGATCAGACTATCTTCTTCTTTTTCCATAATTCTGGCTGCTCTACTCTTCAGCTCTAAGAGCTTGACTTCCGATATTTCCCCCTCGAACACAGAGTTCTGAATCCAATTCAGATATTTTCTGCACAGTTTTAGCATTTTGCCAACACGCTTTTCCCCGATATCGTACACTAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTCCTGTATGGTGCAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //