Array 1 311419-312456 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFT010000006.1 Nostoc sp. CHAB 5824 NODE_6_length_350523_cov_55.525463, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 311419 37 100.0 36 ..................................... AAATATTATACCCGATGCACCAGAAGATACCCCAAT 311492 37 100.0 32 ..................................... TTACCGGACTCAAAGCCTACTTCAAGAATAGC 311561 37 100.0 35 ..................................... ATGAGAAAGACTAGCCTTAAGTTGAATCAGGCTAG 311633 37 100.0 36 ..................................... TTAAAGGCGTGCCAGTTTGAGAGAGATGCCAAGATG 311706 37 100.0 34 ..................................... CATAAAGAGCAATTTCATCAAAAACAACTATTGA 311777 37 100.0 34 ..................................... CGGGCAAGATGGCTTACTCTCTGAAAGCTTGCCA 311848 37 100.0 35 ..................................... AAAACAACTGCAAATACCGCTTTAAAAAATGCTGG 311920 37 100.0 34 ..................................... ATTGTGGTTTGCGGGAATTGAGCTACCATTTTTA 311991 37 100.0 33 ..................................... TCCTCTAAGAAAATATGGGTTGTGGGCGTAGCT 312061 37 97.3 36 C.................................... CGGAACCCCTGGAGGCGTTGGGCTTACGGTCACTGC 312134 37 100.0 34 ..................................... TTTACGATTACTCGCCAAAATTGAATTTGGAGTC 312205 37 100.0 35 ..................................... CCTTGGGATTCCACTGACAATCATCTTCATGGTAA 312277 37 97.3 34 ..................T.................. ATAAAAAGGTATAGAAAGGAACTAGGGATTACTA 312348 37 100.0 35 ..................................... TCCGCAAAAACACTTGGTTGACTGAGACTGTTGAC 312420 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 15 37 99.6 35 ATTGCAATTCAATAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCCCAATATGCCAGGAGCAGTACCTTGGACAGCAACCCAGGCACTTAATAATAGTACATTACCTTATGTTGTCCAGTTGGCGAATTTGGGAATGAAGGCACTGGAAGTTAACTCAGCATTAGCTAAGGGTGTGAATGTGCAGAATCATCACTTAGTGCATCCCGCCGTACAAGAGGTATTCCCTGATTTGGTAAATTAAGGTGTGCAAGGATTAGGCGATCGCTTATTTTAATAGAGGTAGCGATCGGCAATCGGACTAATTTTCTTGCCAAATGCGCGGATGGGTAGGTGTACAAAATGAGAAAGGGCAAAAAAGGCTGTACGCTCCATCTATACAAGACTTTCAGGGCAATGGCACTTTTAAACCATCCGCGCACCTTATGGGGGCTAGCTTTCAGCGATTTGTATCTTGTGCTATGACTATTCCCTGTGTTATGATTCATCCATTCGCGCAACTGCACCTTGAAAACCAAATACAGCAAGGCTTTCAGACGCCAGC # Right flank : CTTTTTGATTCTCTGAAGTGTAACTTCTAATTCATTTTCAAGTCAACAATTCGTCCACAGCTATACTAAAACCCAGTAATACTTTTTGAGTACTAACCACATCACCAGCTTTAAACACCAAAACCTGATTATGAGTCATTACAAAAACTAACCGACTTTCAGGAAATACTAGCCAAACTTCCTCGCAACCAGACTGCAAATACTCCTGTGCTTTGAGAAATAATTCTTCAGCTAAATCGGTGGGTGAAACTATTTCAGCAATTAGTGGGAAACTCTGTGGCAAAGTGGGAACATCACCAAACTGAGCTACCAATTCAGGCGTAAGATAAGCCACATCAGGTCGGCAGCCCTGTTTATATGTGCGACATGGTACTTCAGTATAAACTTTCCCACCTTGTTGATTGGAGTTGATATAATTTCTCCAGTAAAAACCAATATTAAGCTGAATTTCGCTGTGTTTTAATGTCATCCCTGTTTTTTCTACTAGTTGCTCATCTATC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCAATAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 316840-313564 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFT010000008.1 Nostoc sp. CHAB 5824 NODE_8_length_324385_cov_51.189618, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 316839 37 100.0 35 ..................................... CTAAAAAGTACTTTGTTTATACAACTGATGCAGGG 316767 37 100.0 35 ..................................... ATATTTACTAAGTAATTGAAATAATATAAGGATTG 316695 37 100.0 32 ..................................... CCCAAGAGGGTAAATCAAGTAACTCTGGAATA 316626 37 100.0 37 ..................................... AAGCCCTACCCTGGCTTGATGTCCGTAGGCTGCTTGG 316552 37 100.0 35 ..................................... TTCCTAAAATCAGATGCTACCGCGATGATTCAGGG 316480 37 100.0 33 ..................................... CACTAAGACTATTTTCAAGCACAATCACGCTTC 316410 37 100.0 36 ..................................... TTAGCGATATTGGCGGCTTTTGCGATCGCCGGGGTC 316337 37 100.0 35 ..................................... AGATGTTCGGTATTGCCGAACTATTATATTTTCTG 316265 37 100.0 35 ..................................... AAAAGCGAGAGGGCTACATCCTCTCGCTTTTTAGT 316193 37 100.0 33 ..................................... AAGGCCTGAACAAGCTCGATCGGAACTTGATAA 316123 37 100.0 37 ..................................... AGATGTACCAGTTTGGTTTGCTGTTGTCCCACGTAAA 316049 37 100.0 38 ..................................... AAGTGCTTCTCGTGCCTTTCTACATAACGAAAAGTAAT 315974 37 100.0 35 ..................................... TTTCCATGCATCGGGAATTGTATCTAAGGCACAAT 315902 37 100.0 35 ..................................... CGCTCATAGCGCGGATCGCAACTTCTAGGTGGCGA 315830 37 100.0 34 ..................................... TGGAATGCCGGAAAAGTTACCAGAATCAGAAAAA 315759 37 100.0 35 ..................................... TTTTTTTTTTACATCGCCTACTGATTGCGTTAATA 315687 37 100.0 34 ..................................... AGAGCACAGTAAGTTCTTATTTGATATTAACGCA 315616 37 100.0 36 ..................................... TTATTTTCTTTCCGATTTTATGACTTCTCTTGAATC 315543 37 100.0 34 ..................................... AAATATTTTCAAAAAAGTGGCAAAGGGGTAGTTG 315472 37 100.0 34 ..................................... ATAGCCTTTTTATTCAAATCACAGAATCAGGGAA 315401 37 100.0 41 ..................................... TTCAAAAATATTTCTCAATCTCATGATAGCAGCCTTGTATA 315323 37 100.0 33 ..................................... ACTTATCATGCCTTGAATAATGCTATTGAGGAA 315253 37 100.0 33 ..................................... GCGGCAAGTGGGAACCCTGCACCGATGCCTGAG 315183 37 100.0 35 ..................................... AAGACAAACCGCGCGTCCGTCGTTGAGCTTCACAT 315111 37 100.0 35 ..................................... CCAAGACTTGTGACCATAGCATTGATATCAGCAAC 315039 37 100.0 35 ..................................... TCTAAGAGCATACGCCAAGCGACCCAAAGGTTTGT 314967 37 100.0 35 ..................................... CAGTAGTTGATATAAGGGAATAACCATTATCCTCA 314895 37 100.0 35 ..................................... TTTATGGTAGACATTACGGGTTAACCTAAGATATA 314823 37 100.0 34 ..................................... ACTGACCGTAAACCCCAGAGTACTCAAAGCATTA 314752 37 100.0 34 ..................................... AGCCGGGAATATGCTTAAAATCCAGCACGACGGG 314681 37 100.0 37 ..................................... GCACTGTACCGGATAAATAAGCTAAGGTTAGCCCGGA 314607 37 100.0 37 ..................................... CAAGATATTTATGCTTGGTTACGCCTAGCTGATCAAA 314533 37 100.0 33 ..................................... ATCTTCACTGGCCGAGGTATGCGTGCCAGCGCC 314463 37 100.0 33 ..................................... AAAAGCATATTTCCCTACATCCCAATTGAAGCA 314393 37 100.0 32 ..................................... GCTGCTGCCGCGAATATTCTTGTTGAGTTTGA 314324 37 100.0 35 ..................................... ATATTGATGAACTCTTCAGCGATGAAAATTCTCCT 314252 37 100.0 37 ..................................... GAATCAATAAACAGATTGCTGAGGATGAATTAGCCAA 314178 37 100.0 36 ..................................... TACTGAAGTCGGATTTCCTACCTGTACTACCCATTT 314105 37 100.0 35 ..................................... TTCAAAAGCACCGCACGGCACGGGACCGGGGAATC 314033 37 100.0 38 ..................................... TGCAAACAGCAGACCGCAGAGATGGGAGCGCAGATATA 313958 37 100.0 34 ..................................... TAAGTATAGAAAACTATGAGGGTGCTTTGGAATA 313887 37 100.0 35 ..................................... AGAAAATTTGTTCGCAGAAGAACAACAGACATAAA 313815 37 100.0 35 ..................................... GGGTAAATCCAAACTGGAATAATCAGCAGGTAGCT 313743 37 100.0 35 ..................................... CGCCCCCTGGAACCCATGCAGGTACGTTTATTGTG 313671 37 100.0 34 ..................................... AATATAAAGTTGCCCGATGGAATGTGCATGAGTG 313600 37 83.8 0 ..C.....................A.A.C...A...G | ========== ====== ====== ====== ===================================== ========================================= ================== 46 37 99.6 35 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : TATGTTTTCTCTGCTATTCATAGAATTAACAGACCTTATACGTAATTCTTCGCTGGAAAGGGGAACGAAAGAGGTTCTGATTAAAACAGCTTTTAGGGAGTTTGCTTGTGCAATAACAGACTTTGAAGACGTTGCCAAGTAAAGTTGGTTATGAGGGTGCTGGTATTGCGTAGGCGTAGCTTAACCCAGGCATCGCCCTGAAGTCAGCTAACCTAATCAAGTAAGATATCTATGAGTAAGCAGTTTTCTCATCAGATTAGTTTTTTCGCTGAATGCGCGGATGGGTAGGTGTTGGGGAAGGGGTAACTACAAAAAGGGCTGAATTGCCCTATATGCAAGAACTTGAGAGCGTTAGCATTTATAAACCATCCGCGCACCTTATGGGGACTAGTTTTCAGCCATTTGCCTCTAGTCAAATCACAACTCCTCGTGTTATGATTCCTGCATTCGCGCAACCGAACCTTGAAAACCAAATAAAGCAAGACTTTCAGAAGCTAGCC # Right flank : TGTCAGCGCTTCTTAAGAAACTGGCAATACTTGCGTAGGCGTAGCCCGCCGTAGGTATCGCCGCTGTTTTAACCCACATTCCACAGGTGCGATCGATCGCAAATGCTGCATTTTAGAAGCATGGCAACATCAGCATTAGATATCAGGGTAGAGGATATTGACCATTGCGGCATATTCGTAGAGATATGCGATGAGATGGAACTGGTAGAACAAATAAATCGACTGCTTGTTGCCATCCTCAAGAAATAATCAGTGCAAGTCAAGTAGTAAAAGTAATAATTCTCAACAGGTTGAGTTTGTAAGCGCTCCAGTATATCTGGGCTACGTAAACTAGATATAGTTAGTTGCATTAACTATGAGAGCAATGCCTGCGGCGGGTTGCGCCTACGCTCCAAAAATAAAAATAATTGAAAGGGACACTATTGAGTAATAATGTCATTAGGATTTCTAAAGTCCAACTAGTAGAAACAGCGATCGCACTGTTTGAAACACGTAAAATC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 194465-196891 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFT010000009.1 Nostoc sp. CHAB 5824 NODE_9_length_308891_cov_56.913082, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 194465 37 100.0 34 ..................................... TTGTGGAAGTGGAGCCACTGCAAGCATTGCATGG 194536 37 100.0 33 ..................................... CGCAACCCCCGGAGGCGTTGGGCTTACGGTCAC 194606 37 100.0 32 ..................................... TGCGGTTAGATGCGCTACTTTATGATATCTGC 194675 37 100.0 35 ..................................... TATTGTACTACAATTTTATCCAAATGGTGAATTTT 194747 37 100.0 35 ..................................... TACAGTAAACTAAACGGCATATCCATTTCTCTGAT 194819 37 100.0 34 ..................................... CAGAGACTAAGGATCTATTAGGAGCGCTTAAAGG 194890 37 100.0 34 ..................................... AACTAACACCTGCGGGAGGCTGGGCAAACCCTTC 194961 37 100.0 36 ..................................... AGAGCAATGGGCCTCCATTGCCAAAGCTAAGGCTGT 195034 37 100.0 34 ..................................... CGGTAAGACTTCCACAGGTTTTTCAATATTTCCT 195105 37 100.0 42 ..................................... CCATCGCAAGCTGGACAATTGCTTTTGGGCCCATAACCTGGG 195184 37 100.0 39 ..................................... CTGCTTTTCCTTATCAGTGGCGAATTCGAGCGGGTTAGC 195260 37 100.0 35 ..................................... AATAGCTACACCTGGCTTATACCTATTCTTTATGG 195332 37 100.0 34 ..................................... TAATTGCTTTACTACAATATGTGAAGATTAACTA 195403 37 100.0 42 ..................................... CACCTTTCCCCCTTGCCCTTTAACCATTTCCCAGACTAAAAG 195482 37 100.0 34 ..................................... ATGAAATTATCTATAGTAGCTATGGGCAACCCGA 195553 37 100.0 33 ..................................... GTACAGCAACCGACCTTAACCCCCGCGTGGCTC 195623 37 100.0 35 ..................................... CACGATTACCCCACTACGCAAAAGCTCGGAGGTGA 195695 37 100.0 35 ..................................... TCAATAAGCTTCTCAATGGCTAATATCAGCATTCC 195767 37 100.0 33 ..................................... TAGATAGTCTATCCCTAGAGCGGCCGCGGCTCC 195837 37 100.0 35 ..................................... ATCCACTCACTTGCCGAAGTCGGGTATGTGGGCGA 195909 37 100.0 36 ..................................... AGTTTTTGTCTCTTGCAGCCTGGAAGCGTTGCTAGA 195982 37 100.0 38 ..................................... GCGATCGCCTCCTTATGCCCCATTCCCCTTTGCCGCAA 196057 37 100.0 33 ..................................... ACCAGCATCCATCTGAACAGTAGACGAGCTCTT 196127 37 100.0 37 ..................................... CGTTAATCATGCAAATCTCCTAATAATCAACTTTTGA 196201 37 100.0 35 ..................................... CGGCACTATTGATTGCTATGAAATTGATTGCTACT 196273 37 100.0 38 ..................................... TACTAAAACTACTGTATGATAATCTAATTTAAAATCTT 196348 37 100.0 35 ..................................... TAGAGTTAAATGCCCTTTGTACTTAGCAAGACAAT 196420 37 100.0 37 ..................................... TCAAGCATTAGCAAAAAATAGCTTTATTACCGCATAG 196494 37 100.0 37 ..................................... GGGTGATTGAGGCTCCTGTGGAAGAAAAGCTGATTAG 196568 37 100.0 34 ..................................... AACGTTGCTTCGCCCAAATCACCAATCAAAGCAT 196639 37 100.0 34 ..................................... GCGTTAGCTCCAAAGACTTGAGCAAGAGTTGGCT 196710 37 100.0 36 ..................................... ATGCCGCAGCGTCCGGACAAGATGGCAATCGCCCAG 196783 37 100.0 35 ..................................... AAAATTGTGCTTAAATCTATACTGTGAAGAAAAGT 196855 37 86.5 0 ...A.........A......G.G...T.......... | ========== ====== ====== ====== ===================================== ========================================== ================== 34 37 99.6 35 ATTGCAATTCATCCAAATCCCTATTAGGGATTGAAAC # Left flank : TATTTCTTTCATCATCTCTACCTTAAATTAGCGAAAACTTTTATTCTTTGTTATACGTACAGTATTACGACAACAAATACTACAATTTATGAATCAGTCTACCGTAATATTAGCTTCGTTTGCTGTCTAAGCATCCTTTCTCTGTAGCTGTTGTCAGGGAAAAGTCGGATGTATTGGCAAACAAAAGCAATGGGCCTAAATAATTTTCTGTGCTAAGTTCCCTTATAGTTAGGTTCCTGTATGGTTAAATGCGCGGTAGGGTAGGTGTACAAATTCCACAGTCGAAAAAAAGTGCTTCTATCTCAACCCCAGCAAGCATTTCACCTCACTTATATCTAATTTTCATTCGCGCAATCTCTGAAATGCTTACAATCAGTAGGTTTTAGCCTTTAACCTTTACCGCCACTCTTTCCAAACGAATTCTCTAATGCTATGATTGCTCTTGAATCGCGCAACCGCACCTTGAAAACTAAATATAGCTTGGCTTTCAGGCTCCCGCT # Right flank : CCTTAATATCAATACTGGACAAATAGCGATCGCTTATTTAGCGCGATTTATCCAATCTTCTCCACCAGCTAACTGACTGAGATAATCATCCATAATTGCTGGTAATTCTTTTGCCGAATAATTATATGTTAAAGCCAGTAAACTAGTTGCTGTAGTTAAAATCTGGTTTCTATCTAACATCGCTGACAACTGAGAGCGAGTAAATTTGCCCTTCATCACTTCCTCGCTTGCATCAGCGATCGCATCTTCAATAACTTCCTCTTCTATCAAATTATTCCATTCATCTAAATTAATATAGTAAGATGTTTTATTATCTTTGATATTCACTTCTTTAATTTCGCGGATGGCATTGCGAATAGAAACAGCCCAAGAATTTGTTAATTTTTGTTCTAGTTTATTCTTAATCAAATGAATCAGCAAAATTCTTAAAAACGATTTAATCTGCCGCAAAATTGCCTTTTTACTCATCCCCTCTAATTCATCTATAATTGCCAAAGCAT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCCAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 67629-65512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFT010000015.1 Nostoc sp. CHAB 5824 NODE_15_length_188387_cov_53.585956, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 67628 37 100.0 35 ..................................... CCTGTGGCTCCATTTATATTAATCACCGGGGCAAA 67556 37 100.0 35 ..................................... CCCGATCGCGTAAGCAGCAATGGCAAGGGTTATAC 67484 37 100.0 34 ..................................... TAAGCCTTATGATATTAGGTGAAACTGAGTGTTC 67413 37 100.0 37 ..................................... ATTGCAAGCCAACGCAGAGATCGTCAACCAACGCAGA 67339 37 100.0 36 ..................................... ATCGCACACCCAAACTTTACCGTAATCAGAGACACC 67266 37 100.0 31 ..................................... CTTGAATTTCCTGATTTGATTCTTGTGTAGC 67198 37 100.0 33 ..................................... TTTTTCTTCTGGATTTAAACCGCCCATTTTCGG 67128 37 100.0 37 ..................................... ACTGAAGTTGCCGAAGTAAAACTTACATTAGTCGCGT 67054 37 100.0 34 ..................................... CAACAGGTACAGGTATAAAACGACGGGTAGAAAG 66983 37 100.0 35 ..................................... AATACAATCCCTGACAGGCTTCTAAGCAGTATTAA 66911 37 100.0 39 ..................................... TTTACTTCTATTGCTGGGGGGAAGGATAATGTGGTGCGG 66835 37 100.0 34 ..................................... GTAACGGCAATGGCAGACGGAACACAGCGCTTTT 66764 37 100.0 36 ..................................... AAACTCCTTCTGCTGCTCAAAATTCATCATCGGCGC 66691 37 100.0 35 ..................................... ATGGGGGAATCAGTCGCCTGAGGGAAGAGAATAAA 66619 37 100.0 33 ..................................... TCACTCTGCGCTTGCAGAAATCGCCGAATCCGC 66549 37 100.0 36 ..................................... CTCTGAAATAATGGTAATCGGCTTTAGTTGCTGGAA 66476 37 100.0 35 ..................................... AAAATGCATCCTTTCTTATGGGTAGCTTCTACATA 66404 37 100.0 34 ..................................... CTTTAGCGCGATTGTACCGTACAGTGCCAGCCCC 66333 37 100.0 34 ..................................... ATTTTTGTGGCGCGACCATCTACTATTAGTAATA 66262 37 100.0 36 ..................................... TTGCCGCTTCGATTTGCCTTGAAGTAAATTTACTCA 66189 37 100.0 33 ..................................... ATAAATCTTTAACAGAACCCGTAAGTATTGAAC 66119 37 100.0 35 ..................................... CTAGATCAATAATCCACAGTGGGACAACTTTTCCC 66047 37 100.0 34 ..................................... GGATAGACGGCAATCCAGAAACCAAAGGACAGCC 65976 37 100.0 35 ..................................... GCCCATTAATAATCGCAGAATCCACTTCTGTTACA 65904 37 100.0 34 ..................................... ATGCCTTGGGCCAATATTATTTCGTAGGGGAAGA 65833 37 100.0 36 ..................................... CTGGGCTAGCCTGGTAAATCAAGTTTGGCAACTCAA 65760 37 100.0 35 ..................................... TTAAATACCCATGATGCTGTTTATGTTCTCGGGTC 65688 37 100.0 34 ..................................... GATAAAATCTGGCAGGTGGCAGCTAATCCTAAGA 65617 37 100.0 32 ..................................... TGCGAATCATACATGATTTTATATGTGCAATA 65548 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 30 37 100.0 35 ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : AGGCATTGCTTTAAGACCAGCTAGGTGCAGTTTGGTGTAGAATCGTGGCGAATTGAGCGTTAAAAGTGAAACGCAAAGGGACGCTAAGGAAAACGCAGAGGTTTGATAGGTGGCAATTGTTTTCGCATCATGCCATACCGTTAGTCCCATCTGTAACGAGGTAACGCAGAGGTTTGATAGGTGGCAATTGTTTTCGCTAGGAATAAAAGAAAGCCTCTACTTAAGTTCATGGATAATAAACTATTTTGCAATCAGACTAGTTTTTTTGCCAGGTGCGCGAATGGGTAGGTGTTGGTGAAGAGGTGACTACAAAAATGGTTGAATTGCCGTGTATGCAAAGACTTGACGGCTGTATAATCTTTAAACTATCCGCGCACCTTATATGGACTGGGTTTCAGCTATTTTCGTCTAGCACAATTGCCACTCCTAATGTTATCATTTCACTATTCGTGCTATTGAACCTTGAAAACCAAATAAAACATGGCTTTCAGACGCCAGCG # Right flank : ATTACCATGAAGAATTGCTTCAGCAGTAATTTAGCAAATTGATTAACTCAAGCGATCGCGTCCAATACAGTCAAATATTGCATAGTAACTTTATGGCGATTTTGTTAAAGCATAAAATCTGTCAGAACGCATCTGAGTGCCATTTCGCCAAACTTCCACTTTTTCAGAACTGACTAAATAATAAAAACTACCATTATCTGCTCTATATATGCCTTTACCAATATTTAAAGCTGCTATTTTTATAGGCTTGCTTGGGTCTTGTTTCAACTGCCCAATATAAAATAACTCACCATTTTCTTCACAGACTTTTACACGAATATTTGCAGTCTCCCCCTCAATGATGGTAACTCCATTGCATTTAGTATCAGTGTTAACAGGTGCAAAACCTATTGGAATTGGCTGTGAAGATGAAACTTGCTTGACTACTGGGGGTGTCGAGACTGGGCGGTTCAGGTTATGCACTTGCTGAACTTTAGAAGTAGAACCAACACTTGCAGTTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 2 90751-90139 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFT010000015.1 Nostoc sp. CHAB 5824 NODE_15_length_188387_cov_53.585956, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 90750 37 97.3 34 ....................................A AATGCAGTTTTGGCAATACCCAATTCTTTGCAGG 90679 37 100.0 34 ..................................... GCATTTTATCTTTCTTGTGCCCGTATCGTTTTGA 90608 37 100.0 33 ..................................... ATACTATCACCGCAACCGCCGCCGCAGTCGCTA 90538 37 100.0 35 ..................................... ACACCAAGAGTATCCCAGGTTTTCAAAATAAATTC 90466 37 100.0 37 ..................................... CTCCTTTTACACGTATTATTTCTGCTTCTTGTTCGGG 90392 37 100.0 36 ..................................... CGCTGTCTGTCAAAGAATGAATTTGGCTAATTGGGG 90319 37 100.0 35 ..................................... AATCCGTTTGTGGCAGTTGGCGTATTCAATATATG 90247 37 100.0 35 ..................................... AAATCATTCAGAGTTCGCTACAGCAACGCGTGTGG 90175 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 9 37 99.7 35 GTTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : CGGTTCTCAAGTCTTACGGACAATGGATGCAACTGAGTGTATTTGAGTGCGATATCACTCTCACTCAGTATGCTAAACTGCGATCGCGTTTAGCTAAATTGATTAAACCCGACACTGACAGCGTGCGCTTTTATTTTCTCTGTGGCTGTTGTCAGCGAAAAGTAGAACGTATTGGCGGAGAACAGCCACGAGACGAAACAATCTTCTTTGCTGAGTCCCCTTCTGGCTAGGTTCCTGTATGTCAAATGCGCGGAAGGGTAGGTGTACAAATTCCACAGCCCCAAAAAAGTGCTTCTATCCCAACTCCAGTAAGGCTTTCAACCCATTATTCGCCTAATCCTCATCCGCGCAATCTCTGAAATGCTTACCAAAATACGATTTCAGCCTTTAAACTTTCCTGGCGCTCTTTCCAAACAAATTCTCTAATGCTATGATTGCTCTGGAATCGCGCAACCGCACCTTGAAAACTAAATATAGCCTGGGTTTGAGCCTCCTGCGGG # Right flank : AATAGGCTTAGAAAATGAATAATAGTATCTAAATTCACTACCCCCTTAGCTACCATTGGGAGCTTCCTTATCGTTGTTTCCTTATTCTTAGGATAGCTTATGTCATCTACAAGTATCATTCACCCAGCCCATTTTATAATAGTTGAAAGGAAGAATGCAGCGTGGCACTTCAAATACGGAGACGTTTTTTATAATTGTACTGATAAACCGTTGCCAGAGCATGATCGAGAAAGGTTGTTTGGCATAACTAAAAACAAGATTGTCATTGAATTATTTCGCATTAATGGCGGGAAACTGGGCTTTTATTTAGCTAATGTTCGGGACAAGAAATATTACTACTGTGGCACAGATTGGGAAAGAGTAAAAAGTCAGTTGCGATCGCTTGGCATTGGAAGAGATGATCCAATGTCTATGTGAGCGCTTGCAAAAGCCCATCTTATCCCCTGCAAAAATTGGAAAAAGGGTGGGCTACTTGCCCACCCTAAACTATTATTTAATTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //