Array 1 27292-28725 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009583.1 Corynebacterium ulcerans strain 210931 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 27292 29 100.0 34 ............................. AATCGCGGCCACTAGAAGCCATGTGATTAAGTGC 27355 29 100.0 32 ............................. CAGGGGCAGCGGAAAGTGTTTTCTGCAGCACG 27416 29 100.0 32 ............................. TGCTCAAGCGATGCATTCAACTTCTGCAACTC 27477 29 100.0 32 ............................. TACCAGGCGGCTGCTAGGAACCCCCAGCGGGG 27538 29 100.0 32 ............................. CGTTTCTTGGTTTGTGTAAGTAAGGGGAGAGA 27599 29 100.0 32 ............................. ACCCAATCGCAGGCTTCGCCGGCGGTTTCGCC 27660 29 100.0 32 ............................. TCGAGTTTCACGGATCCCTGTAGGCCCCATAG 27721 29 100.0 32 ............................. TCGAGTTTCACGGATCCCTGTAGGCCCCATAG 27782 29 100.0 32 ............................. TAGAGGAGGGGGTTGGAAAACCGCCAAAATAC 27843 29 100.0 32 ............................. CCTTTACCTTGCGCAGAACAAGCTGCACAGCA 27904 29 100.0 32 ............................. AAGGGCATTCCACCTCATCGGGCAATCGCCTC 27965 29 100.0 32 ............................. ACCGGGATCAGGCCAGGTGTGAGCTTCGCGAA 28026 29 100.0 32 ............................. CGGCACGCCTCATAGGGCGCTTGAGTATCGAA 28087 29 100.0 32 ............................. TTTAAGCCCGCGCAGGGAAAGTACCGCTTCCT 28148 29 100.0 32 ............................. CGGGTTTCCGCCGCATCAAGGCACTGCTTCGC 28209 29 100.0 32 ............................. AAGGCTCATTCTGTGGCTTTGCGCACCGCGTT 28270 29 100.0 32 ............................. CACCCCCGGCACCCTTACCGGCTGGGGGAACC 28331 29 100.0 32 ............................. AGGTCAATAGTGGCGACAATCGGTATGGGTTT 28392 29 100.0 32 ............................. GGTAAGCGCCACAGGCGCTAGGGAGGCGGTCA 28453 29 100.0 32 ............................. GGGTAGCTACCGACGCTTTTGATATAGGTAAT 28514 29 100.0 32 ............................. ATGCTCTTGACGGTGCCGAACTCAGCCAGGTA 28575 29 100.0 32 ............................. ATGGCGGGCTAGGTGATATTTGGGATAAAGTG 28636 29 100.0 32 ............................. GAATACGGATTCCGGTGCCACAAGGCCATAAT 28697 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 24 29 100.0 33 GGAACTACCTCCGCATACGCGGAGAAAAG # Left flank : ATTCGCTTTCACTTTTGAATTTTCAAATAACCTGCACTGCCCCAATATGCGAGGGTGTGCGTAGTGCCCGGCGTGGGAATCGAACCCACGGGAAACCATTCGGGCTTTTAATTTTTAAAAGATCGTGTATAGTGGAACTTGGTTTTGGCTAAGGCCCCGGTTGTGGTGACTGGGGCCTTTCCTTTTGCCCATTTCCCGCCAGTTGTTAAAGAAGTTTGTCCGCGGATTTCACAACACCATGATTGACCAGCGTTTTTATCGTCGCAAAAACTTCGTTGATCTTGGTAGTCTTCACGGTGGTGTTATCGCCTTCAGGCCACACCATAGGGGCACTACGCTGCACAATCGCCTTATAACCAAAGGATTCAAGAAGATCAGCGCGGGCCTTAGCCCCAGAGCGTGATTGATAAAGCTTCGTAGTGGAAGGCTCAATAAAAACATTAGTATTGAACCGATCAATATAATCCTGCATCGGTATCCAGCCTTTAGGGACTACGCTT # Right flank : GACTAAATAACCTGCGCGTTTACTCACTCTCTGGGCAAAAATCCTCCAAAACTTCGTCTGGAATAATTGCATCGGCTTCATCCAGGGGGTCAGCAAAACGCACGTCTTCTATTAGACCACGAGCAGAGAGGAAAAGACCATCAAGATCAACGACGGGGCGCCGTTGTTTTCCTGTTGTGCGGATTCTGAACCCTTGCTCAGCATCATATTGTGGGTGAATCAGAGTAAGAGATCCTGCTAGGTCTACGGATTGGCATTTTTCCCAAAGGTTTTCCATGACGGCTCTGGATAGAACTCCTACATAAAGACCTGCGTCTACTTCTGAAAGGAAGCGACTGAGGTAGCCGTTGAGGTGGTTCGGAAGGTTATGTCCTTGGATGACCGCAAACATTTATTTACCACCATATTGTGTGTGCCCTGGGACTTCGTGGTTTCTTCCGCCGATGAGGCGGTCGTCGGTACGCTCGGGGAGATGTGGAGTGAGGATCTCCATCATAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCATACGCGGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 1906919-1910426 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009583.1 Corynebacterium ulcerans strain 210931 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1906919 29 100.0 32 ............................. ATCATGGAGGCGAGGCTTGACAAGCTTCAGGT 1906980 29 96.6 32 ............................T ATGCCACAGGGTAGGTTTGATATTCGTGGCGT 1907041 29 100.0 32 ............................. CGCACCTATCCACGAAAGGTTGGCAAGCAGAA 1907102 29 100.0 32 ............................. GTGGTGAGCTATCCGGCTTGGTGGAGCAGGCT 1907163 29 100.0 32 ............................. GAGACCTCGCTTTAGATGTCACCGGATCAATA 1907224 29 100.0 32 ............................. GCTGCGGGTCCGAGCTTCGCGATCACGCGGTC 1907285 29 100.0 32 ............................. GACTGGACATGCCCGTCCTGCGGCACACAGTG 1907346 29 100.0 32 ............................. ATCCAACGTCATCGCCGCCGAAGCATGCCCCA 1907407 29 100.0 32 ............................. ATCCCAGACTCCGAATCCGGTGTTTTATACCC 1907468 29 100.0 32 ............................. TTTAATTTTGGGTATGGTGATCCCCGAGCAGC 1907529 29 100.0 32 ............................. GGGGTTTAGCGCTCGATTGTTCGATGAACTCA 1907590 29 100.0 33 ............................. CCATCACAACCCCCTTTACGTGTGATTACTCAG 1907652 29 100.0 32 ............................. ACCATCGGTTCGTGTGAGCCATTCGGGGGTGT 1907713 29 100.0 32 ............................. GATGTGGACGCGGTATAAATATTGCTCACTCA 1907774 29 100.0 32 ............................. ACGGTGGGAAGCTGTGAGGGTTAGAGTGTTTC 1907835 29 100.0 32 ............................. ATTGTTTGTAGTCCCTGCCCCACAGCGGTTAC 1907896 29 100.0 32 ............................. GTGAAATCTTCTGATTTTGAGCTGGTGTATTC 1907957 29 100.0 32 ............................. CAAAGGTGCATCCACATGATCACGCGCTCGCT 1908018 29 100.0 32 ............................. GTCGCGAATCTGATGCTCGGTTAGCCGCAGTT 1908079 29 100.0 32 ............................. GGCCTAGAAGCCGTGGATGTACTCAAAGAATT 1908140 29 100.0 32 ............................. TCCGTTGGCTACGATGCTCCCCATGATCGCTT 1908201 29 100.0 32 ............................. CTCGGACTCCACAATTTCACTCAGGTATTCGG 1908262 29 100.0 32 ............................. CGTCAGTGGTTTATTCATCGTTTCTGCTTTCT 1908323 29 100.0 32 ............................. AGTGGATACCGTCGCAGTTGCCGTCACGGAAG 1908384 29 100.0 32 ............................. TGCGACGGTATCCACTGTTTCGTCGCCCTCCT 1908445 29 100.0 32 ............................. TGGAAGCGATTGGTTATCTCGAACGACTGCAA 1908506 29 100.0 32 ............................. GGCCTTAGGATTATCAACGGCGAAAATGCGCT 1908567 29 100.0 32 ............................. GTACCCAGCGGGTTGCCCTTTGCACTTTCCCA 1908628 29 100.0 32 ............................. GCTGTGTGTTTTTTGTGAAGGTGGGTGGCATC 1908689 29 100.0 32 ............................. TGAAGGAGCGCGATGTTCTTATTTCAAAGCTG 1908750 29 100.0 32 ............................. GCAAAAGCGGCTCAAGGCTCAGCTGATCAAGC 1908811 29 100.0 32 ............................. GTGTCATAAGCAGAAGACGCCCCACCAATGAG 1908872 29 100.0 32 ............................. TTTTTCCGAGGGCATTAAAGAGCTGGCGGAAA 1908933 29 100.0 32 ............................. GCTAAAAGCTCAGCCCCGCTTTTCCGAATCCC 1908994 29 100.0 32 ............................. AAAAATTTTCACCCAATCAGGTCCGCGTGTCA 1909055 29 100.0 32 ............................. ACGGGGGCTTCTGCGACGGATAAGCTGAAAGC 1909116 29 100.0 32 ............................. ATCCTCCTATCACCAAAAATAGGAGGGATCCA 1909177 29 100.0 32 ............................. ACGGTCCGTGGGTCGATTGACATCCACAACAA 1909238 29 100.0 32 ............................. CTGCGACCACCACGACTGTGACCCGTTTTTAG 1909299 29 100.0 32 ............................. GCGTGGTGGATTCATTTTCACGCCGCGCTATG 1909360 29 100.0 32 ............................. TGGCTGCTCACTGACGAAATAGGTCATGTATG 1909421 29 100.0 32 ............................. GATATGGTCGAGGTGGAGTGCACGTCATTGTC 1909482 29 100.0 32 ............................. AAGACTGCTTGATCATGCTCTACTGCCGCTGC 1909543 29 100.0 32 ............................. AGCTTGTTGGAAAGAAGACTGCGCACCTTGAA 1909604 29 100.0 32 ............................. ATCCTCAACGGTTTTGAGAACAGTTAGTGGTT 1909665 29 100.0 32 ............................. ACTTCTGCCTGAATCCAGTAGCCGTACCATTG 1909726 29 100.0 31 ............................. ATCAATGGCGATGTGATTGCCTACGACCTCG 1909786 29 100.0 33 ............................. CATCATCGTGATGGCAGTGTGGCGTGCAACGTG 1909848 29 96.6 32 T............................ GGATCACTAGCGGAAATCCGTGGAATCAGCGA 1909909 29 100.0 32 ............................. GGGCTAGAACCCGTGCGTCTTGATCCTGATGG 1909970 29 96.6 32 ............................T AGCTGTGCCCATAGGCGACAGTAGCGTAGCGG 1910031 29 96.6 32 ........A.................... CAGTTGCGGTCGAAGCCGCTGCAGCGGGCTGG 1910092 29 100.0 32 ............................. GCTGGTTTCGGTGTTGCGGCGAATATTGTTGC 1910153 29 100.0 32 ............................. CAATCGGCTGGCCTATAGTGTTCAAAACTTCC 1910214 29 100.0 32 ............................. AAGCTGGGCAACCCTCGACCCCGCTGGAAGCA 1910275 29 100.0 32 ............................. ATCATTGCCCAGCTCACGAGCACGCTCGGCGG 1910336 29 96.6 32 ............C................ GATACGCTTAGACATAACACCGGCGGCATCAG 1910397 29 82.8 0 ....................A...AGC.T | A [1910416] ========== ====== ====== ====== ============================= ================================= ================== 58 29 99.4 32 CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Left flank : GAACACCGCCAGCCCGAGAAACCCCCGAAACTGCGACTGCTCAACATCAAGGATCTGCACGCCATTAGCAGCTAACACTCGGAAAGCTGCTGCCGACACTCCCTGTCGATCCTGGCCTGAAATAGTAATAACAGCCGGGGTCAGCTCTGGGCGAAGGCTAACAGTTACTTGAGGCTGGTCCAGTTCAATCACCGATCTATTGTCGCACGAAGCCTTTCAAATCCTCCCAGTGCTCCCCTATTTAGGAATGACGGGCTCCGCATCAACGAATGCGCACTTGCGCTTCATCCTATGGGGCAAATTATCTTATCTTTTGATTTTGCGATTTTATGTCTTCTCCTGGATATTGCGAGGGTGGTTAGTAGATCTTCCCGCTTTTGTCATGGTCTAATAAGGAAGGCTAGTTTTCGCACCGATTGTATGGAGTTAATGTGCTGATTCCAGACGCAGTTTGGACTGTTTTTGATTCCTTTGGTGATTAAACACGCAGGTAAGTTAGT # Right flank : TACAAAAACCTATCATCAGCCTTGATGAACTTTTTAGACGTCGAAGACCACAGAAGAAAACAACAAGTTGATCCGGTTTTCCAGCCACTGGCAAGACCTCAGGAGTAATTCACCACGTTGCTATCGCGACAGCAATCAAGAGGAAGAGCGAAGACATGAATACGTACCAGAAAATAAAGGAAAAGACAGGAGGAAAAATCTATCTCGGAGTAGGACTACAACCAGGCAATCAAGACGAAATAGCTATCGAAGCCTGCTACATAGAAGCACTTATTGACTATGGCTATCTCGATGTAGAACTAAAGAAAGAATTTCTAAAATTATGGCTCACTGATGATATGTACGATGATCTGAGCGATCTTGACTCAATAGAACTGAAAACATATCGTAACCTACTAAAATATGCAGGCATGCAGCCTCGTGTAGATACGTCTGTCTTCCGCCCTGAGCCCGCATAAAACTACATCGTTTAATCAATACATCAGTAACAAGTTTTCTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //