Array 1 1857713-1856917 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045453.2 Sulfurospirillum sp. ACSTCE chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 1857712 35 100.0 34 ................................... TGATTGATTTGTAATAAACCATTGTAATGTTTCT 1857643 35 100.0 37 ................................... AAGATAACATTGGAACTCCTTTTAATAATTTAATGAT 1857571 35 100.0 34 ................................... GTCAAAACAGCTAAAATAACTAGACGCATTTTCG 1857502 35 100.0 35 ................................... TGAGATTTTCTACCATCTTCTTTTACATTTACTTT 1857432 35 100.0 34 ................................... TAGAAGAATTTTTAGCTTAGGAAAAGGTTCATGA 1857363 35 100.0 33 ................................... TTTAATCATTTTATTTCCTTTTAATAAATTTTA 1857295 35 100.0 34 ................................... CCAACCATCAGAATCTTTTAAGTTTTCTGAATGA 1857226 35 100.0 33 ................................... ATCTCATCAAGCGTGCAATCCCAAGCATCACCA 1857158 35 100.0 34 ................................... ATAGTATTGTGGTTACTGTAACCCATAAATTCTG 1857089 35 100.0 34 ................................... ATTTCTTGTTCTTCAAAAAGAACATCAGCAGATT 1857020 35 100.0 34 ................................... GGATAAACCATAGCTTTTTCTACTTTTTGATTTG 1856951 35 85.7 0 ..............................TGCTT | ========== ====== ====== ====== =================================== ===================================== ================== 12 35 98.8 34 ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Left flank : ATGCAAGAGGAATGATTTTAGCACGTTATGAGAGGATACAGACAGTATGAAAAACTATCTTTTATGCTATGACATCAGCGATAAAAAACGCTTAGCCAAGCTTGCAAAACTTTTAGAAAAAGAGGCGTTTCGTATCCAAAACAGCATCTTTTTACTTTTAGAACCAACTTCTCATGAAGTGGACATTTTGGTACAAAAGATAGAACAATGCATCGACAAGGCACACGATGATGTCAGACTCTATACCATTAAATCAAATGGTTTTCATTTGGGTTCTGCAACCAATCTTGATGAACCGTTTCTTTTGATATAACTCTAAGAGAGAAAACTATACAATGCACTCTGTAAAGCAAGAAATGGTTAACGTGAAAGTTTCGTTTAAGAAATTATTGATGCAAAAAAGGGCGTTTGCAAGGCGTTTAACCTTAAAAAAGTGCCATTTTTCATCATGTAAGGTTTACCTAAGAAATGAAAGTGCGATAGTATCGGCATTCTCTGCT # Right flank : TCGAACCTAGAACATTTTAAAAATATAGTGAAATGTACGCCTGAAAAGCTCTATGCTATCTCAAGGTGCCCATTACTTCCACATCTTCTTGAAAAACTGCAAACTCTAGGTTTTATACTCTTTAAAAACTATCCTGATTCTGCTGATCAAAAGATTATAGATCTGATTACGTTGCAACACTTACTCCTCAATCCATAAATCTTTTTACATGTAAACATCTCAACTATCCAATTTCTCTCTATTTTTACCTCGCTTTTTGACAGTTTTTGTCTCACACTTACTCTACGATAGCACTCGACAAAAGGGAAAGAGTCTTTTGAAAGAGTGGTTTTTGTGGGCGATGACACGATTCAACATCAATAGAGTGCATGTAACTATGAGAAATCATACATGCATCATCAACAATAGTCTAAGGAATTGAAATGACATTTATACAACGCTTTTTAGTGGGTGGTGTGGCAATCGCTACTTTTTCATCACCTATCTTTGCAGAAGATTTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 1874522-1874076 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045453.2 Sulfurospirillum sp. ACSTCE chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 1874521 35 100.0 31 ................................... TTCAATTGGATCGTTGTACGATAGCATTTTG 1874455 35 100.0 33 ................................... TTTTTAAAATTTCTGCAGATCTTGCGTCTTTTG 1874387 35 100.0 34 ................................... GAGAGACCTTCCAAATTCTCCATTACCGCTTCAG 1874318 35 100.0 34 ................................... CTTAAAAAGATTGTTTTATTCTGCTGCTGATCCA 1874249 35 100.0 34 ................................... CATAAATGAAACAATCATTTATTCTCCTTGATAA 1874180 35 100.0 35 ................................... TACCAGAAGAAGAGAGATTGGCATAGAAAAAACCA 1874110 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =================================== ================== 7 35 100.0 34 ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Left flank : TATGGGCATTTTATTCCCAAATAGTAAAACACCTCTACTGAACTATATATAATATTGGCATTTTATTCCCACAAATAAATCTTATGACACTCTTATTTGCTATTATCTATAATTGAAAGAACATTTTTTCTTTACCAAAATAGAACTTTTTGGCTTTTATATCTTTTTTTGTGGTTATGCGGCAATGGTTTTTCTTTGATTCCTTCTTTACATGCAAAGGTGTTTATTTTCAACAAATAGTATTTTACATGACTTAAAAGTTGACAGTTTAACGCTAACTCTATATTTCAGTTATCTCCCATTTGAGAGAACTCTAAGATAGAAAAATATAAAATGGAGTATGTACAAGCATAAATCGATAAAACGTGAAAGTTTCGTTTAAGAAATCATTGATGCAAAAAAGGGCGTTTGTAAGGCGTTTAACCTTAAAAAAGTGCCATTTTTCATCATGTAAGGTTTACCTAAGAAATGAAAGTGCGATAGTATCGGCATTCTCTGCT # Right flank : TAATATGCAGTTGTATGCTCAACTTCTGTTACATTACATATTGACCCGATTTAACATCATCATTGCTTACATGTAAGAAACCATGGGAGGCAACTATCTTAAAAAATTTGCCGTATCTTTTCTCCTTTTTTACAAATAGCATACCTAACTAAGCAAGCTGTAATACTCTTTTTGGCTTAATACTTATTATCTTTATGGGGAGAGTTAAGTGTTACGTTTTATCAAAATCGACATCACTTTCTCCTCTTCTTTCACTACTTCATTAGACTTTCTTGGCTCAACTTTAAGGGGTGCTTTTGGTGTTGCACTAAAAGCGGTCTCTTGCCTCAATAAAACTCAGGAGTGCCAAGGGTGTTTTGCTACTCAAAACTGCCTTTATTATGATTTTTTTGAAATCAAAAATAGAGCGCATGCGTATCGCTTTTCGAAACCATTGCATGAAAACAATTACAATTTTTCTTTGTATCTTTTTGAGGCGGCATGTGAAAAACTTCCTTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 3 1881529-1881219 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045453.2 Sulfurospirillum sp. ACSTCE chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 1881528 35 100.0 33 ................................... CTGTGTGTATATCGATTTTCCTTCCTGTCTTTG 1881460 35 100.0 34 ................................... CTATTTCGCTCTAATTTAACCTCTTTAGTTTTTT 1881391 35 100.0 33 ................................... TCGATGAAATTGATTAATTCTCTAGATAGATAT 1881323 35 100.0 35 ................................... AAAAGCTAAACTTTTACTCTTACCGTCTTTTTTAA 1881253 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =================================== ================== 5 35 100.0 34 ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Left flank : ATAATAGCAAAGTTGTGTTTATTCCTACAGATCTTAAACATAGCCTTGAAGGAGCTACTGGAGGACTAGGGACGATTTTTTCACAAGTAAAGTAGACGCAATTTAGTAACTATTACATCGTTTTTTAGTTGTATTTCTACCTACGGCATTAAATCCATTATTTTGCGATAAAACTCGTAAGCCATTCTCTATAAGGGTACTTGGCATCACGCTTACGAGTTTCAATCTTAGCCATATTGGATGATACTTCTTAAGAGGTTATAAGACAATTCTTTGTTTCTGATTTTTTCTTTAACTTCTCTTTGAGAGAACTATAAGATAGAAAAATATAAAATGATGTATGTACAAGCAGAAATCGATAAAACGTGAAAGTTTCGTTTAAAAAATCATTGATGCAAAAAAGGGCGTTTGTAAGGCGTTTAACCTTAAAAAAGTGCCATTTTTCATCATGTAAGGTTTACCTAAGAAATGAAAGTGCGATAGTATCGGCATTCTCTGCT # Right flank : TTTTCGATGGTTTTTTCTAACAGTGGAAGATCTTAATTACATACTGACCCAATAATTTTTATGGATTTGCCATAAAAGTCTTCACAATAAATATATCCCAGTTTTTATTTACAAATTGACTATATTTGTCACTTCAATACTCTATTATTCCTTATTAAAACAAATAAAGGAAAAAAATGTTTAACGACTTTATAGTACACATTAACAATGCTCTTGGTGCATCGAATTCAAAAGTAATTGTTATAGCACTTGTCATATTTTTATATGTTTCTATTGGATGGTTTATCAATAGCTATGGAGAGAGACATTACCAGTACCCGGTTGTTTCTGAGAATTGGAATTACATTTTATTTCTAGCTGCGTGTATTGGCGTAGCAATATTTTTGGGAATATTAATCTCTTCAGGTACAGGGCTTCTTTCTGGTGAAGAGGTGATGAAATTAATTGTTTTTGGTATTTTGGTTGGATTTATTGCTTTGTATGTCAGAATATATAGAAAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACATACTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //