Array 1 504483-508918 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOWU01000001.1 Bifidobacterium longum strain JSRL 03 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 504483 36 100.0 37 .................................... GTGGTCGGCTCCAATGGCGTGATTGCGCGGCTCATGG 504556 36 100.0 36 .................................... CATACCGTTCAAGGCCGGTGGCCGTGGCACGGTGGC 504628 36 100.0 38 .................................... GAATGGGAACATCGACGAGCGGCGCGGCCTGTTCGACC 504702 36 100.0 37 .................................... TGCGGCCTCAAGATTGCCCAGCGCGCCTTCCATGGTC 504775 36 100.0 36 .................................... TTCTGGAACGGCTCCGCGTGGCTCCCCTACGCGACC 504847 36 100.0 37 .................................... TGGGGACAAAAAGGGAGCGAACCGGGGACAAAAAGGG 504920 36 100.0 36 .................................... ATCGTCGTCTGCTCCGCAGACCTACAGGCAGATCCG 504992 36 100.0 37 .................................... CCAAGATCGTGAGCATATCCTTCGAGCCGAGCGGGCG 505065 36 100.0 37 .................................... GGCGATTTCCTGCCACGTGTCGCCATATGCCTGAGAG 505138 36 100.0 36 .................................... ATATATATGCGCACTGGAACCGGGCGCACCAACATC 505210 36 100.0 35 .................................... TCTTGGGTTGGGGGGAGAAAAAACTGGGCGCGGGG 505281 36 100.0 36 .................................... ACAGCGGCTTCAACGTGTTTTCGATAAACGCACGTT 505353 36 100.0 36 .................................... GAAGAACAAGTGGAGGGCGGCGACACCCGCACCCCC 505425 36 100.0 37 .................................... TTCGTCCAGCGTGTCGAATACGTCAACGCCCATTGCA 505498 36 100.0 35 .................................... ATGTTCGTCGTGAGCTTGACGATCTCGCCGTCCAG 505569 36 100.0 35 .................................... GCCTGAGATGCACGCTGGAAAACACTCAACGGGTT 505640 36 100.0 36 .................................... ATCACATTGTTTCTGTTTCGCCAAACAGCTCACTAA 505712 36 100.0 36 .................................... TTGACTGGATATGTGATGTCTGCGGATAAAGTAATC 505784 36 100.0 36 .................................... CAAAACCCAAGAGAACAAAACCCAAGAACAATCCCC 505856 36 100.0 35 .................................... ACGAGCCGCGAGGACCTCAGGGCCACCGTCGCCAA 505927 36 100.0 37 .................................... CTTCGTCAGATCGCTCGACTGGTCCGGGCGAGGATTC 506000 36 100.0 35 .................................... CAGTGGACGACCACGCGGGCCGCCAAATCACCCTT 506071 36 100.0 35 .................................... GGGCCTTCAACTTGTCGACCTCCTCCTGACGGGAC 506142 36 100.0 36 .................................... GCAGTTCGAGTTTCCGGCACGTGACAGGCAGTGTGA 506214 36 100.0 37 .................................... GGAGTCCCGACCGTATGGTTGCAATTGGACTGAGATG 506287 36 100.0 36 .................................... TCCTCCATTCGGTCCATCTCGTCTTGCAGCAGTCTT 506359 36 100.0 38 .................................... GTTGATGATCTTCTGGTTCGCTCCGTCGCGCCCGCCAA 506433 36 100.0 36 .................................... ATGCTGGAAGGTAACGGCGTAGGGCATGGCAGAATC 506505 36 100.0 36 .................................... TGGGTGCCCTTGCGCCAACACTGTCTTTCGCGCAGC 506577 36 100.0 36 .................................... GACTACAGCAACGCAGAGACCGCCGAACTGAACACC 506649 36 100.0 34 .................................... GCACAAAAAGCTGCCCCCTGCTCAGTGGCGGGAT 506719 36 100.0 37 .................................... CCGGACGTACTGGTGTCCTTCAATGAGACGGCGAGCG 506792 36 100.0 36 .................................... AAGCCCCACGGACGTGCCCCGCCATACTCAGGAGAA 506864 36 100.0 40 .................................... CCGCTCCGGCGGCCAGAGTGTTCGTGGCCCATGAATGGCG 506940 36 100.0 37 .................................... TCTGTCGAGTCGCATTCCGCCGATGACGCTGCGGACG 507013 36 100.0 38 .................................... GCCACAACATAGGGACAACCATAATGCGCGCGTTCGGG 507087 36 100.0 36 .................................... TCGGGAGAACCGTCATACACGGCCCAACTCGGCATA 507159 36 100.0 35 .................................... TCGACCTTGGTCTGGGAATTGGGCACTTCGACGTA 507230 36 100.0 35 .................................... TCGTCGGCGGTGGTCCAGATGCCCATCAGCGAGAA 507301 36 100.0 35 .................................... GAACGCGACTATCCCGCGACTCATTCCGAGGCCGG 507372 36 100.0 36 .................................... AACATTGGGCACCGACCCGGGTGTTCTGGTTACGGA 507444 36 100.0 36 .................................... ATAATAGTAGGGCCATACACCTTATTAGTGCATGAC 507516 36 100.0 37 .................................... CCGTTACAGGGCGTATGGGGTGGCGTGAACAGGAGTA 507589 36 100.0 37 .................................... AAGCCACATCAGCCGAGAACAATGCGTATCCTTCTTC 507662 36 100.0 38 .................................... CCGCCAGCAGCGTGCACTGTTACGAGGCTTCTACGGTC 507736 36 97.2 37 ................T................... GCGTTCCAACGGTCCATGCTGCCGTTGCCGTGCGGCG 507809 36 100.0 35 .................................... ATGTTGTCGAATCCACGTTTCTTTCTCTTGCGGTT 507880 36 100.0 37 .................................... GTTACCGGAATTGTCAAGGCGATACTTGGGCAACGCA 507953 36 100.0 36 .................................... AACCAGTTCATCGACATCCTCGTAAATCGTATCGGC 508025 36 100.0 35 .................................... TACGGTCACCAGTACCAAGTCACAGGGTATGAGTG 508096 36 100.0 35 .................................... TCATCGACCACGTAGTCAAGTCAAAGGACAACCGG 508167 36 100.0 36 .................................... TAAGCGACCAGGACGCGAGGACCGCTAGCGAACGGT 508239 36 100.0 35 .................................... AACAGTTGCACCATGCAACAATATCCAAACTTGAG 508310 36 100.0 37 .................................... TCGGTAATCCAGCAGCCGGATATGCCGACGAATCGGC 508383 36 100.0 35 .................................... GCGAGTGCGATGTGCATGTTCCCGTCGTTGTCGAG 508454 36 100.0 36 .................................... GGCGCGCGTCTGCACATGATTGTCGTCCCGCCCGGC 508526 36 100.0 35 .................................... CGCAACATCGGTCATACTTGGTTCTGTGTCCATCA 508597 36 100.0 37 .................................... CTCAATATCTGGACTCAGATATACGGCGCGCTGGGTA 508670 36 100.0 35 .................................... GACATGCCGTTGTATCGCATCCCGTTGGACGGTAT 508741 36 100.0 35 .................................... CATGAGATAGGCGTATTGCGATACAAAAAAGCCAA 508812 36 100.0 35 .................................... TTGGTGGGGGCTAGCTCGTCGTGGCATATGCTGAC 508883 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== ======================================== ================== 62 36 99.9 36 CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Left flank : GAAAATCCATACGGCTTATTTAAGGAATGTGATTTATTTTTTCGCGATATGCGATAGATGTTTGATAACTAAATAGTGGTACTAAGATAAGGGGGGTGCGGATGTTTTTTTTGACGGTCAGGCGGCCAGTCCAAGGTGTTTGCGGTATTGCACGGGGCTTATCCAGTCCAGTGACTTCTTGATCCTAGTCTCATTGTAGTGGGTCAGGTAGGTGTATTGCTTCAATGTTTGTTGGGCGGGTTCGGCAGTGTTTTTCCGCCCCTTACGCTTACGAAATCAACGGCTCGACGACGAACTGACATCCACGAAAACAGCAATAGCGCCTATTGTTTTTGCGAGATCTGAATCGCTCCTGAATGAGCTACTAGGCATTCGCAATGAGAATATAGCGGTTCTGTGGATCTGAGAATCGAGATTGCTATGTTAGAGGACGTAGCCGTCCTCCACCTCTCGCAGTTTTGTCGGGAAAACCTCCAGTGATACTATAAATTCGAGCCTGC # Right flank : GAGTGTGAGGCATGAAAGAAAACTCTTACACTCTGGCCTTGCATATGATGTGACCTGGTTTTTTGTTCCGCATCTCCTATCAAGTGAGAGGAAATGCGGAACAAAAACCAGGTCACATCAATATCGATACACTTCCGTGTGAAGCTCGTCATAGTGGATTGCACGAAAAACAGGTAGGGGGCTTTCCGCCATCAACAGCGGAAAGCCCCCTATTCTTACGGTCTATCTGCCCTAATTAGAGTACCTCACTCCGCAGCAATCGCGGCCTTGAGCTCCTCGACCTTGTCGGTCTTCTCCCACGGGAACTCAACGTCCGTGCGGCCGAAGTGACCATACGCGGCGGTCTTCAGATAAATCGGACGTTTCAGATCCAGCTCGTCGATAATCGCAGCGGGGCGCAGATCGAAGACCTTGCGTACGGCGGCGGCGATCTGGCCGCGCGTCACGCCTTGCTCGGTGCCGAAGGTCTCCACGTTGACGGATACCGGGTCGGCAACGCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.10,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //