Array 1 12224-9944 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDGB01000030.1 Lentilactobacillus parakefiri strain JCM 8573, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12223 36 100.0 30 .................................... GCAGACAATTTATGTTCATCATCAAACGGG 12157 36 100.0 30 .................................... TCAAAAAGTGTATGTTCCAAAGTGTCATCA 12091 36 100.0 30 .................................... TTAGCTCTGCCACAGTCGCCGGTGTTATAA 12025 36 100.0 30 .................................... TCGGTTTCCTTACCAGAAACATCATAGGGA 11959 36 100.0 30 .................................... AAACTAAAGGCAAAAAGGATACTAAAAAAG 11893 36 100.0 30 .................................... ACAATTTTAGCAACGCCCTTGATAACTTCT 11827 36 100.0 30 .................................... CAGTCTGAATATTCACCAACTCGGTTGTCT 11761 36 100.0 30 .................................... AACTTTAAATGTCTCTTTCATAGTTTCCTC 11695 36 100.0 30 .................................... ACGGGACTGATCCGGTCGGTGATACGCTTA 11629 36 100.0 30 .................................... GGCTTAATGACCAGGTAATACTTGGTCCGA 11563 36 100.0 30 .................................... CCTTACGACACTTAACAAAGTCAAAAGGCA 11497 36 100.0 30 .................................... AAATTGATATTCCACGCCCCGAAAAGGTCT 11431 36 100.0 30 .................................... CAATTAACGCCAGCTGAAAAACATAACATT 11365 36 100.0 30 .................................... CAAATGACGATGGATATACTTTTATGATCG 11299 36 100.0 30 .................................... AACGCTTATGGATTGCTTCGTTAGTTTTTA 11233 36 100.0 30 .................................... AAGCCTATTTTACTGCTATCACACCGCAGG 11167 36 100.0 30 .................................... ATAATAAGCCAAATAATAATCGCTAGACCT 11101 36 100.0 30 .................................... TTAATTTTACTGTAGTCATTCAGCACTTAG 11035 36 100.0 30 .................................... GCGAAGATGCAGATATTGCGCAAGCCTATT 10969 36 100.0 30 .................................... AAACCAAAGGCAAAAAGGATACCAGAAAGG 10903 36 100.0 30 .................................... CAGGATTGGCGAATCATGGTCAACTATGGT 10837 36 100.0 30 .................................... GATCATGAGTTATGATTCTGAAAGCATATT 10771 36 100.0 30 .................................... ACACGTTGGAAAGTTTGGCCCAGGGGGTTT 10705 36 100.0 30 .................................... AAACTGACGTTCGCAATGAACGCGCTGCCA 10639 36 100.0 30 .................................... CGACAACAGATAATATATTTATACTTTCAT 10573 36 100.0 30 .................................... ACCATACGTATCTATCGCGCCTTTTAAGCT 10507 36 100.0 30 .................................... CCATGTATAGTCCCTTGTGCTCTTCATTCC 10441 36 100.0 30 .................................... TTTGAAATGAAAGGTTATTCAATTGATTAT 10375 36 100.0 30 .................................... CTGTACATGGTACTACCGCCCACGAGTTTC 10309 36 100.0 30 .................................... TAATAAAGAGATCAAGCCATTAAAAATTAC 10243 36 100.0 30 .................................... GGCTTAATCCGGCCATAATAAGTTCCCCGA 10177 36 100.0 30 .................................... TTGTAGGTCGCTTACCCGCGACCACAACTT 10111 36 100.0 30 .................................... ATGCACAAGTTGCTAACTCTGTTGAAACGC 10045 36 100.0 30 .................................... GTTAATGGATTACTGACATATGTAAACATG 9979 36 80.6 0 ...........................AAGCTGT.. | ========== ====== ====== ====== ==================================== ============================== ================== 35 36 99.4 30 GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Left flank : TAGTGATGGTGTGAGTGAAAAATATAGTTCTGGAATTTACAAGCAACTTGAAGCTGTATTGACTGATGATCAGCGTAAGTCCATAACTGACATTAACAGCCAACTGTATACCTGTGTTCAGAAATGCTTATTCATGATTGATCTACCTTTGGAAGTTACCTACGATTGGGATTTGAAGAAGCTGTTCAAGTACTGCAAAATTCACTTTAATGCTGATACCATGCAGAACCCATATGCTATAATTGAATCAATTATTAAAATTCATTTGGAGTGTGGATTGAAGTCTGCAGTTGGTCTAACTAATGTCGCTCATTATCTTAATCAGCAGCAATTAACTGACTTATCCAAGCTTACAAGTTCCACAGCGATCTCGACATTATTAGTAGAATTCACAGATATGAAGTCACAGGAGCTTTATACCAATTGCGATTTCTACTACATTGACGAGGACTTTGTTGATTGGCATTCATAACACATTAAAACCTGGTTATAAAAAATCG # Right flank : AAGATCTATGATTTTTGATATACTTCTATGTAAAAAGCGAGTTTAAGCTATGAAAAATTATCCCAGCAATATTACTCGGCAACAATTTGAATTAATTCGACCAGCTTTAGAAAATTTTCGTAAGCGAACTAAGCCTCGAAAATATAATCTCGGGATGACGAGAAACTGCGGATCGATCACTGACTAAATCAGTGACGGCGAACAATCAGCTATTGACAAAAGATCTGGCATGGCCTATTCTCAGGTTAATTAAACATGAGACGTTAATGAGAAGAGTAACTGGTTGGCTTACCAAACAGAGACTGCTGAATGCTGAAAATGCAGGCTAAACCAATCGGTGAAGATGAGCTCGGAGTCTTGTCGAAAGTGAAAGCTTTAGACACGTTGAGGGGTCGATATCCCCCAGAATATGATCTTTTTGATTGTATTTTTGAGGTGATTCAGCGTAAGTTGAATCACAAACTTTGGGTGGCACCACGACTAAATTCGTCCCTGGACAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //