Array 1 255307-254187 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG698740.1 Parabacteroides sp. D13 supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 255306 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 255229 47 100.0 29 ............................................... CATAGTATAGTGATCAAAAACATCAAACG 255153 47 100.0 30 ............................................... AGGTAACGGGCAGACCAACCATCTGCCCAC 255076 47 100.0 30 ............................................... GGTGACGGCAACTACACCATCCGGACTCAA 254999 47 100.0 29 ............................................... ATCCCCTTTAACTCCATATCCGCCTATTC 254923 47 100.0 30 ............................................... ACATTTTATCTTCCAAAGAACTTATCTATC 254846 47 100.0 29 ............................................... ATCAGCTCTCTCGTCCGTGAGGATGGGGG 254770 47 100.0 30 ............................................... ATACATGTGTATATACACCAATATACCCCG 254693 47 100.0 29 ............................................... ATACCCGAGAAGTGATTCACTGGTATGGA 254617 47 100.0 30 ............................................... CTCCGGTTTATTCTTCTTAGACATATACTA 254540 47 100.0 30 ............................................... ACGACGCATTCTCGTCCTTTATCTTGCCTA 254463 47 100.0 30 ............................................... GCAAAGAAATACTCCCACGAGTAAACGACG 254386 47 100.0 29 ............................................... TGCTATATCCTCTATTTCGCTTATTTTGA 254310 47 100.0 30 ............................................... TTTTTCAACTCGCAGATCGTTTGCCGTTCC 254233 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 99.4 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : ATCCCCGAAACATTTCCCTTTTTCGGTCAAAATCCCTATATTTGCATCAGTTCCAAGAGCAGAGCGAAGCAATGCAGCGAAACCCGCACAGCTACCAAATCGCTACCGGCTACCGAACTTTCTACTCTTTAAGTCTTATCTACCAACCGATTACAAAAAAACGATTGTTTTTACAGGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : ATATTATCTATTAAAAACTATTAATCAATGGATTACAAAGCACATCAGAATAAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGAAGAAAAGATTTAACTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGGCGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //