Array 1 1-2257 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYCP01000025.1 Campylobacter fetus subsp. fetus strain H1-UY contig25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1 28 93.3 36 --............................ CCTTTTTTAAAGCTGCTTATTGCTCCAGCACTTACT 65 30 100.0 34 .............................. TTTTCAAACCTAACGACGTATATAGCGCCTTCGC 129 30 100.0 36 .............................. TTTTTACCGTTTTGAAAATCAACAAAAAGTTCTATA 195 30 100.0 35 .............................. GAAATACAAATATCTGCAGGAAGTGTTTTAGATAA 260 30 100.0 36 .............................. TCGAATAAGTTGTTAAGATTATGCAACTTTTTTGTA 326 30 100.0 33 .............................. TCTATTAAGCTCATTTCAACTGTTTTAAACTTT 389 30 100.0 36 .............................. TTTTTACCGTTTTGAAAATCAACAAAAAGTTCTATA 455 30 100.0 35 .............................. ACTCTATTAAGCTCATTTCAACTGTTTTAAACTTT 520 30 100.0 37 .............................. TCGTAATCTTCTTCCATAATTTTAAAGTATAGATTAG 587 30 96.7 36 T............................. TCGTAATCTTCTTCCATAATTTTAAAGTATAGATTA 653 30 100.0 36 .............................. TCTGATAAAATGTATTTGGATCAATACCTAAAGCTC 719 30 100.0 36 .............................. CCATTTAGCATATCATATACTTGATCTGCCATTTAT 785 30 100.0 36 .............................. GATAATCAAAATTTTACAAAGCAAGTTCTTGTACAC 851 30 100.0 36 .............................. TACGCTTCTTTTGGTGCTACGCTTTGGATTTGATTT 917 30 100.0 36 .............................. GGCGCAGCCGTAGAATTAGGGCTTAGTTTCGGCAAT 983 30 100.0 36 .............................. TTGATATTAGTATAAGCAATATCATATTTTTTAATA 1049 30 100.0 36 .............................. TCTTCTAAAGCAGAAACTAAAAAGCCATATCCGATG 1115 30 100.0 34 .............................. TCATTTTTGTCATCAGGACCAGGAGAACTGACAC 1179 30 100.0 36 .............................. CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACT 1245 30 100.0 31 .............................. TATAAAGACGGTGATACTATACGACCCTTTT 1306 30 100.0 36 .............................. TCGAGTATCGGTTTCAATTTTATTCCTTTGTAATTA 1372 30 100.0 36 .............................. ACGACTTAGTGCTGTACATTCAAATACAAATAATTT 1438 29 96.7 36 .....-........................ TTTTTACCGTTTTGAAAATCAACAAAAAGTTCTATA 1503 30 100.0 36 .............................. TTTACCAATTTCTATTACTACCGCGTTCACCGGTAT 1569 30 100.0 34 .............................. CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGA 1633 30 96.7 37 C............................. GGGGATATGGTAAAATCTGCAGTTAAATCTAAGTTAT 1700 30 100.0 37 .............................. CCTTTATAATCTATACTAAAACCATTTAATATAATAT 1767 30 100.0 36 .............................. CTTTTTTCAAGCTCGATTTTAATATCCCATTGCGCG 1833 30 100.0 36 .............................. TTTTTACCGTTTTGAAAATCAACAAAAAGTTCTATA 1899 30 100.0 36 .............................. TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC 1965 30 100.0 37 .............................. TCCAGAGCTAATAAGGGATTTAGAGCAGCTAAAAACT 2032 30 100.0 36 .............................. TCATTAAAACACGATATTGTGATCCGCCTTTCATAT 2098 30 100.0 36 .............................. CTTTTTTCAAGCTCGATTTTAATATCCCATTGCGCG 2164 30 100.0 35 .............................. TTGCTACAAAGACGGTGATACTATACGTATTATTT 2229 29 96.7 0 .............................- | ========== ====== ====== ====== ============================== ===================================== ================== 35 30 99.4 36 GTTTGCTAATGACAATGTTTGTGTTGAAAC # Left flank : | # Right flank : | # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATGTTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //