Array 1 224623-225848 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADOFX010000003.1 Pediococcus pentosaceus strain FAM 18523 FAM18523-i1-1_scf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 224623 36 100.0 30 .................................... TTGTAGAATTGAATTTTGAATAATGATCGA 224689 36 100.0 30 .................................... GAATCGTTTCGGCTGTTAAATCCGGAATGA 224755 36 100.0 30 .................................... ACCAGGATGAGTTTGAAATCAGTCAACGAA 224821 36 100.0 30 .................................... GGCCGTTTCATCAATTTCAAACGTTACGTA 224887 36 100.0 30 .................................... CATTATTTTTTAGAATGTAAAAATAAGGCT 224953 36 100.0 30 .................................... CGTCCTTTTGAGACACCTGCATAGTTACCT 225019 36 100.0 30 .................................... TCTGATTAACATCACTTGTAACGGTAATTG 225085 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 225151 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 225217 36 100.0 30 .................................... ATCGCAATCAAGATATTTTGATTCAAATCA 225283 36 100.0 30 .................................... CGACCGGAATTTCAGACAGTAAAAAGGTGC 225349 36 100.0 30 .................................... TGATGTACTAGCGATTGTGCTAATTACCGT 225415 36 100.0 30 .................................... TACTTGTAAAAAATCGTTTTGCGGGCGCTA 225481 36 100.0 30 .................................... AATTCGGATGGTAGCAACCGATTGTGGTTG 225547 36 100.0 30 .................................... AGGGAATGAGACAGACGAATACCAGTGATG 225613 36 100.0 30 .................................... ATGTTTGTATCATCTAGTTTCTATCGTGCA 225679 36 100.0 30 .................................... TACAAAAAGCCAAAGGTTAGCAAAGTAACA 225745 36 100.0 30 .................................... GATGTTTTAGATTTTGAAGAATACACAAAA 225811 36 91.7 0 ...........A.................A..T... | C,A [225839,225841] ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.6 30 GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACGGTCTGTTACAGATGAACAGCAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCGTTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAGCTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAATG # Right flank : CAAACTGTACCCCCGCAACAACTTAGCCAGCTGTTGTAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAAAAGAATCATTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGATCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATATGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATTGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATCGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACCAAGGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATCGTAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //