Array 1 83874-83309 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYPZ01000004.1 Rhodobacter capsulatus YW2 seq0004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 83873 32 100.0 35 ................................ TCGGACGGCACGGGGGACATGGCGGACGAGGCTGC 83806 32 100.0 35 ................................ GTCGCCGCGATCACCGACAGCGTTGCGACTGGCGG 83739 32 100.0 34 ................................ TTCCGAGCGCATCACATAGGCCCAGGGCGGATCG 83673 32 100.0 35 ................................ GGATCATCACCATGGCGTTTGCGCAATTGCACGCC 83606 32 100.0 39 ................................ CGGACCTATGGGGCGCCGGCGGATTTGCTGGAAGCGGCG 83535 32 100.0 34 ................................ ATCACCAAGGTGCGCAGCGGATCGATCGCGCGGG 83469 32 93.8 31 ..............................GT GCTGTCATATTGCCAGTTCTCGCCCACGGCC 83406 32 93.8 34 .C...........T.................. GACGCCACCGGCATGGGCTGGACCGTGGCGGAGG 83340 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 9 32 98.6 35 GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC # Left flank : GCGCCAAACAGGGCGCTGCGACCTCATGCAGGCCATTGCCTGCGTTGCGGGCGCGGAAGCGACGCGTCAGACACCCCCTTTGGGGGCTGCACATTCCCCCAGTCCTCCTTCGTCGTGCTATGGTCGGCCCATTTCCGGCGCGTCTGATGCCTTACCAACGCCTTCCGGTCTCGGCGCGCCCCCATCACGCGGTACGATGGTCGAGTATCATCCCCGTCATTCCGCACATCTCCCAACCCCACCAGCGGCGATGATCCCATCGTTGCCGCCGAACCAAGAAGTTCGATCAGGTCGCCCACCAAAATTGGCGCCTTGAACGCGGCCCCGGCGGGCGCGGGACCCGTTGATGAAGCAGCATCAGGAGCCGCCATGTTCGAGGGCGCGATTCGGCGTCAACGGGCTTCAGACGAGCCGAATCGTCAGCTTGGGGCGAAATCCATGTCAATCCCCGGCCGGATGCACCGCTTACGCTAAAACCAATTTGCGCCGCCGCGCCCATT # Right flank : CGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAGGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAACGATCCGCCGCGACATGTCCGAAAATCGGACGCTCTGATTGCGAAAACTCGGCTATCCTGTTGCGGTCTTCCAGCTGCCTGCACACTGTGCCGGCCTATGGAACGGGAGGTCCATGGACCGGGAGACCGCTATCGACAGCAGATCGGCCATTCGTTCGGGGGAGGAGCAGATGGCACACCGTATCAGAAAGCGCGGCTGGGAGGAGTTCATGGCGGTTGGCCGCGCGTCTCCGGATGTCCGCAGCGAAGTTTTGCAGAGTTGGCAGCGGTCCGCGGGGCGACGGATCGAAAAGCTGAAACAAGCGCCGCTCCTGAGCGAGGAGGAATTGCTGACGCAGAGGGCGCAGGCGCGCCGCCTGCGGTCCGGCGCGCGCGGGGTTCTGAACAGGGCAGGAAGTCTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //