Array 1 155230-155661 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSQB01000009.1 Paenibacillus alvei strain MP1 NODE_9_length_158263_cov_42.983951, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 155230 32 100.0 34 ................................ CAAAGAGGTCATGTATGGATGGAACAGCAACAAC 155296 32 100.0 34 ................................ ACATCCGAGAACGATGTACCGGAGCAAATCATTA 155362 32 100.0 34 ................................ CTTGTACAGAGTTCTGGTGTACTGGCCTGCTTTT 155428 32 96.9 36 ...........T.................... CACAACAGTACGGAATTTGTCCTCGCTCTCAATCTC 155496 32 93.8 36 ....T........T.................. TTTGCTCACATCGCGTCCGTCGATAACCAGGGCAAA 155564 32 100.0 33 ................................ ATTCAGCAACCCACTAGCACGCCAAGAGAATCC 155629 32 93.8 0 .............T.................C | T [155657] ========== ====== ====== ====== ================================ ==================================== ================== 7 32 97.8 35 GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Left flank : ACAAGAAGATTGGCGATGCTGTTAAGGTAGGCGAGTCCTTGGTAACGATCCATGCGAACCGTGAGAATGTGGATGACGTCATTGCAAAAATTTACGAGAACATTCGGATTAGCGATCATGCTGAGGCACCGGTGCTTGTCCATGATATCGTAACGGAATAAATAGGAAAAGAAGAGCCGTGTATGACGAAGGGAGTATTTTGACCTGAGTCATGCACGGTTTTTGTATTTTGTAGTTGTTTTATAAATATAGTATTTACCTAAATTAAAAGAATGGTATATATTGGGGTATAGGTGTGGTCATAAAGCTGGAATAATTCTGGTACGAATGTATAGTGCACATGAAAATCCCGGGAGATTCGCACCTGTTATTATGCATTTTTATCCTTTTTTTTCTCTATAACATTGCATCTATCTTGGTTTTTGACCGAAAAGTTCGTTATAATGAGTGATAAAATTATTGACATGAAGTGATTTTATAAATTAGGCTCATTTTCCGCT # Right flank : CGAGATGCGGTATACAATACGTTAAACGTTTTGGGTTATTGTGTCCATATCAAAGTTTGAACCAACTGTATAAGCTATTCGGCACGTTGCCTCATTTACACTATTTCAATATTATGGTAACATGAAACAAGAAAAAATTGGAAGGGTGAAGGTATGAAAGCGACGTCGCCTCAATATTCAACTATTGGCGACATCATAAGAAAATACAGAAATGAAGCCAATCTAATGCAAACCCAACTTGCAGAAATGTCGGGTGTTAGCTCGGGGTATATTTCAAAGATTGAAAATGACGAAGTGGAACGCCCATCATTTGAAAAAGTATATCCTATATCTGCCGCCTTGCATATTCCAATCCGCGAAATCGTCCATCCGTATCTAGAAACTGCACAGAAACCAGATGTGTTTTTCGGTATTTTGAATAAATTAGTTAAAGAACAAAGGGACGATTTAACAGATTTAATCATGCAAACGGCATCAGCTTGCTTATATAGCAAGGATGA # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.00,-9.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 367004-362665 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSQB01000003.1 Paenibacillus alvei strain MP1 NODE_3_length_374955_cov_42.837277, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 367003 32 100.0 35 ................................ AATATCAAGGACATTTTTCCAAGCTTCTTGCAAAC 366936 32 100.0 34 ................................ CACTGGAGCTGGTGACCATACCAAGACATCCATG 366870 32 100.0 34 ................................ ACGAATCATCTCAGCAGACGGCCCAATGAGCTTG 366804 32 100.0 32 ................................ TGCACAACCAGTTGCTTGTCACGCTTATGCTC 366740 32 100.0 36 ................................ AATAATGAGAATCCCAAATATTATGATAAAAGACCT 366672 32 100.0 33 ................................ TTTAACAAACCCCTTATCAAAGCGAATATTTAC 366607 32 100.0 37 ................................ AGCATACTTAAGTGATAAATTACTTGTCATTTGTATC 366538 32 100.0 34 ................................ AATACCGCATATGTAGAGTCATCGCCGTCCGTCA 366472 32 100.0 34 ................................ CGGTGCTGACGCAGCTCATAGAATATCTGGTAAG 366406 32 100.0 34 ................................ TTTGCTGATTTTTCCAGAATCTCTATCGGCGTTT 366340 32 100.0 34 ................................ AACTTATCAACTTCGAAAAGAACCTTGTCGTCTT 366274 32 100.0 37 ................................ CTGCACAGCAGCAAGTATGTTGCTCTTGTATTGCTCC 366205 32 100.0 38 ................................ TCAGAGTGTCAAGCATAACGAAGCTCGGCTCGTCTGGA 366135 32 100.0 32 ................................ TATCCATCCGCGCAACAATGATAATATCTATC 366071 32 100.0 34 ................................ CTCTTGTTGCAATTTTAAAGCCGCCATTGCTACG 366005 32 100.0 36 ................................ ACGAACAACAGATTCGCCACAATCAACGGAACCCTG 365937 32 100.0 33 ................................ AACTTATAGAAATTCGGGAAGTTATCCCTTGCC 365872 32 100.0 36 ................................ ATCCTGACCAGGACGACGTTCGTTCGGATTTTGACC 365804 32 100.0 37 ................................ ACAATTACGTCTGTTTATTTTGGTTATGGCTTGGCTC 365735 32 100.0 38 ................................ ACTCATTTTACTGCTTTATGGGGTGGAGGGATTAGTAG 365665 32 100.0 35 ................................ AATTTGAGAATCGGATCCACTTTAAGATGGGGCCT 365598 32 100.0 37 ................................ TCTCCATACATTCCTGAGACGGGCACAATCATGTATT 365529 32 100.0 33 ................................ CATCAAAATGCACTGACTTTCCAAAAATGCACC 365464 32 100.0 38 ................................ ACCACGATATCGGAAGCAATGACAGAATGGAAAGCAGC 365394 32 100.0 34 ................................ ATGCTTAAGCAGCTGCGGACATTTTTTTCTTGAA 365328 32 100.0 36 ................................ TATCCATCCGCGCAACAATGATAATATCTATCCAAC 365260 32 100.0 34 ................................ TATCCATCCGCGCAACAATGATAATATCTATCCA 365194 32 100.0 35 ................................ AATGTCGTATATTCAGCTTCAGAAAAATACACTCT 365127 32 100.0 37 ................................ ATGGGTAAGGTGTCCGAATGGCTCACCCTACCCAGTA 365058 32 100.0 37 ................................ CTTCATCCGTGCCATCATCTCTTCGATTTCCATCTGC 364989 32 100.0 34 ................................ AATACCGCATATGTAGAGTCATCGCCGTCCGTCA 364923 32 100.0 33 ................................ ACCACGATATCGGAAGCAATGACAGAATGGAAA 364858 32 100.0 36 ................................ TTCGAAAGATTACTAGACTAGAGAACCGTTTTTCTC 364790 32 100.0 37 ................................ CGATACAAGGTATATACGGACGAACGAATGTCATTCC 364721 32 100.0 37 ................................ AATTTCGATAGACTTGTTATATATCCGTGTAGAACAT 364652 32 100.0 38 ................................ CATCTCAGCAAACATGGTATAAAACATAGATAAGGCAG 364582 32 100.0 35 ................................ AATCAGGGGTATTTTTATAATTTTGCTCAACCCGT 364515 32 100.0 35 ................................ ATCCATTACGATCAATGCATTTTTAACATGACCAA 364448 32 100.0 34 ................................ CTACTGCAATACGAACTCTAAAATACATATAATA 364382 32 100.0 37 ................................ ATATTCACGTTCCAAGTCAAACATTTCATCAAAACTT 364313 32 100.0 34 ................................ CTCTGGATGTGCTTTGCTTGCTCTTTAAGCTGCT 364247 32 100.0 33 ................................ CGATTACGGGTTACGGATGCTTTAAATCAAACG 364182 32 100.0 36 ................................ TATTTCACTCCAAGAAAAAGGGCAGATAATACCTAG 364114 32 100.0 35 ................................ AGGAGTATAGCCTAAATGCAGATACGGCTTATGAG 364047 32 100.0 35 ................................ TTAAAGTCCGTGAAATCAAGCGCAGGTGTCTTGTA 363980 32 100.0 38 ................................ TCATATGCGTCTGCTAAATTTGCCGATCCGGTTGTACC 363910 32 100.0 34 ................................ ACGCGAGTGATGTCGGGATGCTCTAGCACGAAAC 363844 32 100.0 34 ................................ TATTATGAGCGACCCGCGAAGTGGTAAACGAGTC 363778 32 100.0 33 ................................ ACGAATCTGCGCTAAATCGGCACGATTCAAATA 363713 32 100.0 37 ................................ AGAGCACAAGAGGACGCTTATGACAGAATCAAATCTA 363644 32 100.0 37 ................................ AGAGCACAAGAGGACGCTTATGACAGAATCAAATCTA 363575 32 100.0 34 ................................ AAACAAGAGCTTATCTATGAGAAGGATGGATATA 363509 32 100.0 35 ................................ ATCGAATTATTAATAAAAAACCGTACATCCAAGTG 363442 32 100.0 35 ................................ TACACTCTCCCCTTGGGCTTTGCCCTGATTGGTTT 363375 32 100.0 36 ................................ TCGGCAGTCAACCCTAGATGAGGACGGAATGCTATA 363307 32 100.0 37 ................................ AAATACCGCACACCTAAATAGTCAGCAGCGAACGCCG 363238 32 100.0 33 ................................ TATCCACGAGTTAGGGGAATCTATCAAGTCGGA 363173 32 100.0 34 ................................ CAGACGGAACAAGGGAAAGACTCAGAAAGTCAAT 363107 32 100.0 39 ................................ TATGGACGATAGAGGTGAGTAGATGGCAGAGACTATAAA 363036 32 100.0 36 ................................ AAAACGTACGCTTCAAATAGCATCAGAGTTGTCGAC 362968 32 100.0 34 ................................ TAAGAGACATCGAGAATGTAGACCGAAAGCTTAA 362902 32 100.0 38 ................................ ACTATCGACAAGATGAACGAGAACGAAACAATGATTAA 362832 32 96.9 38 ..................T............. TCCCGAGTCTGTCACACATGTACCCTGCACTGCTTCCA 362762 32 96.9 35 ..................T............. TGTCTAACAGCGGGAAGGTTATCAGTCGTTTTGTC 362695 31 84.4 0 .......................-.CG...TA | ========== ====== ====== ====== ================================ ======================================= ================== 65 32 99.7 35 GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Left flank : CCCTCCATTTTTATGGAAGTAGGTGTATGGGATTGTTGGTGTTAATTACGTATGATGTCAGCACTACGAGTAGCGACGGACAGAGACGGTTGCGCAAGGTGTCGAAGACGTGCCAGAATTATGGTCAGCGTGTGCAGCATTCGGTGTTCGAATGTAATGTAGATGCCACTCAATTCGCTGCTCTCAAGATACAGCTCGCGGATATCATTGATCAGAAGGAAGACAGTCTTCGATTCTATCAGTTAGGTAACAACTATAAGAACAAGGTTGAGCATATCGGCGTGAAGGAATCGATTGATTTGGATGGGTCATTGATTTTCTAGTGCGAATGTGAAGTGCACATGATTTCTCTGGGACATTCGCACCTGATTTTTGCCATTTTTATACCAGTTCCATGATGTTGATGTAAGGTTCTCAGTTGTTTTTTATTAAAAATCGCGATTTTTGATTGAATAAATCATTATATTTAGACATTTTGATTGTTTTAGTCAATAATCGCT # Right flank : CTAGAACGTATATTGGCTGACAAAGTTTGTCACTTGGTGCTTCTATAAGAGAGGTATTCTATCGTATAGAGGTGAAAAAGTAGTATGGACTCGACAATTCTTGAGCTGCGGCTTCATCCTAATGTTATCCCCTATTAGCATATTTACTGTTTTATTTCAACACTTAAAAGGACTGGGATAATCATTGTCCCGCTTGCCATTCATCTGTTGGGGATTCCCCAATGGACATAGGTTAGATATATAGTAGCGGCATACCTCATTTTGAAATGGGGCAAAGCAATATGTTATATCTTGAATAGCGTTCATTTCTCTTATGAACGAAGAAGCTATGTGCTGACTGCTAATGAAATCGTACATTGGGGAAACATATGGTTCACCAACTCATCGATTATCCCCACTCAGTCGAAGATGGATGACTTGCCTGACGGCAGCCTGCTGTTCGAAGCAACCTGAATCATGAGCAGAGCTTTCTGAAATGGATTTCGCAGTATGGATCTTCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.20,-9.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 4641-2944 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSQB01000066.1 Paenibacillus alvei strain MP1 NODE_66_length_11401_cov_31.887894, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 4640 32 100.0 34 ................................ AACATCAAGCGTCACAGCATCCGGTTTCAGTTCC 4574 32 100.0 34 ................................ GTCTCTTCAGCGCCGAGTGGAGATCCGTGTGTAC 4508 32 100.0 35 ................................ ATCATTATATCGAGAATTTAAACAGATAAGGGGGC 4441 32 100.0 34 ................................ AACTACCACTATTTAGCGGTTTATACTGATCAAG 4375 32 100.0 35 ................................ CCGGCACAAGTCCATAATCTCCACTGTGCGAGCAA 4308 32 100.0 34 ................................ ACGTTGGATCGGCATAAGAAAATACGGGAGATAT 4242 32 100.0 35 ................................ ACTACCGTTGATGAACAAGGAAAAAAATGGAATAA 4175 32 100.0 35 ................................ TGTCATTGCTTCCGATATCGTGGTGAAACTTCCGC 4108 32 100.0 34 ................................ CCCTTAACTGCACCAAATAACTTATGAATGTACT 4042 32 100.0 36 ................................ AGAAAAATACACTCTATTCAGCCGTAAGGACAACCG 3974 32 100.0 35 ................................ ATCCTTCTTGGGCATATCGCTTTGTACGTGTTCAC 3907 32 100.0 33 ................................ ATTTGTATTGTCCTCCAAATTTTTAATATAATT 3842 32 100.0 34 ................................ ACTATTCGAATAAGCATTGAAGTGCTAAATGCAA 3776 32 100.0 34 ................................ ATCCTGACCAGGACGACGTTCGTTCGGATTTTGA 3710 32 100.0 34 ................................ ACTACCGTTGATGAACAAGGAAAAAAATGGAATA 3644 32 100.0 34 ................................ CTAAAGGGGTAGATACGGAATTATTGTTCACTAC 3578 32 100.0 35 ................................ CCCTTAACTGCACCAAATAACTTATGAATGTACTG 3511 32 100.0 33 ................................ TTCGAATCCGCGCATTTCGGTGGCGGTGGCGGC 3446 32 100.0 36 ................................ TTATGTGCGTAGATATAAAGTCGCGCAAGCTCTCTC 3378 32 100.0 37 ................................ ATTTTGAAACCAATCTACTAGGAGAATATTCGGAAGG 3309 32 100.0 36 ................................ ATCACGACCACTTGAAGAAGATAAAAACAAGGTAAT 3241 32 100.0 34 ................................ ATCAATCATTGGGCGCTGCCGACGGGAGCGCTCG 3175 32 100.0 34 ................................ TGTGACTCTATCAAAAAGCGTTGATCTGGATTAA 3109 32 100.0 37 ................................ TATCCATCCGCGCAACAATAATAGTATCTAGCCAACA 3040 32 100.0 33 ................................ CCCTGAATGATTGGTGTAGGTGCGTAGAAGTCG 2975 32 90.6 0 ...........C......A...A......... | ========== ====== ====== ====== ================================ ===================================== ================== 26 32 99.6 35 GTCGCATCCTATGCGGATGCGTGGATTGAAAT # Left flank : AAATAGAAACCATTCGGCAGCAAATGGTGCAAGCAGCAGAAAAAAAGAGCCTAATTGATGAAACGGTTGTGAAGTTAAGCCAGGAATTGGACATTTACCTTGTGAAGTATCAGAAATCTAAACTTTCAAAAAAAAAATATCTATATAAAGGAATGTGGAGCGGCGCAATAGCGATGAAAAAGGAATGCCTCTGGCAGATGAAATTTTAATTTTTTGCTTTATTCGTTTAAAAGTTGCACATTTGGCATATTGATGTCTACTCCATTTTTAGAGTATCGTATATTGGAGAGAGGTATGCTTGTAAAGTTGGGATACTTCTGGTGCGAATGTATAGTGCACATGAAAATGCCGGGGGATTCGCACCTGTGATTATACATTTTTATCCATTTTTCTTTCTATAACATTGCATTTGATTTCATTTTTTGATCGAAGTGATCGTTATAATGAGTGATGGGATCACAAACGGAAGTGAATTTATAATCATAGGCTCATTTTCCGCT # Right flank : CGTAAGATGGCCTGATACGAAACAAAACGGGTTTCGTCGCAACCTACGTGGATCGTAATTTCTGGTCGTGAAGGTTGTACGGAGTGGTGGAGAGTCATATCCGATATGAGAGCATGAATCGAATACCTAATAACCTACACAGGACATCAATGGAACTAACGCTAGTTCGAGAGGTGTCCTTTTTCTTGTTCACATATGTCGTTTACTATATACAAATAATATGGTAAATTGTAGATAATTGTGGGGTTCTGTAGAAATAGGTCAAAAGTATTGCCTTTGTTCATATCTTGAAAATCATGACACACAACGAGGAGCGTTGATATGTTTTCGATTGCTCATATTCGTGAAAGCGACCAACAGGTACAGACGGTCGAGGCGCATTTGTTAGAGGTAAGAACATTAGCGGAAGGTTACGGTAGTAAGCTGGGTGTCCCTCATGTGACCGGACTAGCAGGTATGCTCCATGACATGGGAAAATATTCACAAGAGTTTTGCGAATA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTATGCGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGTGTGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //